RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.48□□□□□ -0.89
CDH13-206ENST00000562601 SAMD9Q5K651 1589 aa9.48□□□□□ -0.89
CDH13-206ENST00000562601 ABCC2Q92887 1545 aa9.47□□□□□ -0.89
CDH13-206ENST00000562601 G3V3G9 751 aa9.47□□□□□ -0.89
CDH13-206ENST00000562601 POTEGQ6S5H5 508 aa9.47□□□□□ -0.89
CDH13-206ENST00000562601 L3MBTL3Q96JM7 780 aaPredicted RBP9.47□□□□□ -0.89
CDH13-206ENST00000562601 FHOD3Q2V2M9 1422 aa9.47□□□□□ -0.89
CDH13-206ENST00000562601 FAM69CQ0P6D2 419 aa9.46□□□□□ -0.9
CDH13-206ENST00000562601 UHRF1BP1LA0JNW5 1464 aa9.46□□□□□ -0.9
CDH13-206ENST00000562601 ZCCHC11Q5TAX3 1644 aaKnown RBP9.45□□□□□ -0.9
CDH13-206ENST00000562601 FBXO22Q8NEZ5 403 aa9.45□□□□□ -0.9
CDH13-206ENST00000562601 MAPKBP1O60336 1514 aa9.45□□□□□ -0.9
CDH13-206ENST00000562601 ABCA8O94911 1581 aa9.45□□□□□ -0.9
CDH13-206ENST00000562601 TSPOAP1O95153 1857 aa9.45□□□□□ -0.9
CDH13-206ENST00000562601 KDM5BQ9UGL1 1544 aa9.43□□□□□ -0.9
CDH13-206ENST00000562601 ASXL2Q76L83 1435 aa9.43□□□□□ -0.9
CDH13-206ENST00000562601 NKX1-1Q15270 411 aaPredicted RBP9.43□□□□□ -0.9
CDH13-206ENST00000562601 DIP2BQ9P265 1576 aa9.42□□□□□ -0.9
CDH13-206ENST00000562601 ABCC10Q5T3U5 1492 aa9.42□□□□□ -0.9
CDH13-206ENST00000562601 MS4A4AQ96JQ5 239 aa9.42□□□□□ -0.9
CDH13-206ENST00000562601 PLSCR2Q9NRY7 297 aa9.42□□□□□ -0.9
CDH13-206ENST00000562601 LOC105371045A0A1W2PR82 267 aa9.41□□□□□ -0.9
CDH13-206ENST00000562601 KCNH8Q96L42 1107 aa9.41□□□□□ -0.9
CDH13-206ENST00000562601 SCUBE2Q9NQ36 999 aa9.41□□□□□ -0.9
CDH13-206ENST00000562601 BOLA1Q9Y3E2 137 aa9.41□□□□□ -0.9
CDH13-206ENST00000562601 RAPGEF6Q8TEU7 1601 aa9.41□□□□□ -0.9
CDH13-206ENST00000562601 EFCAB5A4FU69 1503 aa9.41□□□□□ -0.9
CDH13-206ENST00000562601 ARHGAP35Q9NRY4 1499 aa9.4□□□□□ -0.9
CDH13-206ENST00000562601 ATP1B4Q9UN42 357 aaPredicted RBP9.4□□□□□ -0.9
CDH13-206ENST00000562601 DPY19L2Q6NUT2 758 aa9.39□□□□□ -0.91
CDH13-206ENST00000562601 C3orf67Q6ZVT6 689 aa9.38□□□□□ -0.91
CDH13-206ENST00000562601 ATP10BO94823 1461 aa9.38□□□□□ -0.91
CDH13-206ENST00000562601 EPRSP07814 1512 aaKnown RBP9.37□□□□□ -0.91
CDH13-206ENST00000562601 NUP153P49790 1475 aaKnown RBP9.37□□□□□ -0.91
CDH13-206ENST00000562601 GTPBP6O43824 516 aaPredicted RBP9.37□□□□□ -0.91
CDH13-206ENST00000562601 SPRYD3Q8NCJ5 442 aa9.37□□□□□ -0.91
CDH13-206ENST00000562601 WDR7Q9Y4E6 1490 aa9.36□□□□□ -0.91
CDH13-206ENST00000562601 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.36□□□□□ -0.91
CDH13-206ENST00000562601 PCDH10Q9P2E7 1040 aa9.36□□□□□ -0.91
CDH13-206ENST00000562601 MICALL2Q8IY33 904 aa9.35□□□□□ -0.91
CDH13-206ENST00000562601 GLI2P10070 1586 aa9.34□□□□□ -0.91
CDH13-206ENST00000562601 CLIP1P30622 1438 aa9.34□□□□□ -0.91
CDH13-206ENST00000562601 TMEM121BQ9BXQ6 578 aaPredicted RBP9.34□□□□□ -0.91
CDH13-206ENST00000562601 PPRC1Q5VV67 1664 aaKnown RBP9.34□□□□□ -0.91
CDH13-206ENST00000562601 CDK13Q14004 1512 aaKnown RBP9.34□□□□□ -0.91
CDH13-206ENST00000562601 FMN1Q68DA7 1419 aa9.33□□□□□ -0.92
CDH13-206ENST00000562601 MAP3K4Q9Y6R4 1608 aa9.33□□□□□ -0.92
CDH13-206ENST00000562601 LRRIQ1Q96JM4 1722 aa9.33□□□□□ -0.92
CDH13-206ENST00000562601 PAXIP1Q6ZW49 1069 aaPredicted RBP9.32□□□□□ -0.92
CDH13-206ENST00000562601 CFAP44Q96MT7 982 aa9.32□□□□□ -0.92
CDH13-206ENST00000562601 PLEKHD1A6NEE1 506 aa9.31□□□□□ -0.92
CDH13-206ENST00000562601 HECW1Q76N89 1606 aa9.31□□□□□ -0.92
CDH13-206ENST00000562601 CEP162Q5TB80 1403 aa9.31□□□□□ -0.92
CDH13-206ENST00000562601 CFAP43Q8NDM7 1665 aa9.3□□□□□ -0.92
CDH13-206ENST00000562601 PCF11O94913 1555 aaKnown RBP9.3□□□□□ -0.92
CDH13-206ENST00000562601 PPP1R37O75864 691 aa9.3□□□□□ -0.92
CDH13-206ENST00000562601 FAM163AQ96GL9 167 aaPredicted RBP9.3□□□□□ -0.92
CDH13-206ENST00000562601 CD109Q6YHK3 1445 aa9.3□□□□□ -0.92
CDH13-206ENST00000562601 KDM6BO15054 1643 aa9.28□□□□□ -0.92
CDH13-206ENST00000562601 CASKIN1Q8WXD9 1431 aa9.27□□□□□ -0.93
CDH13-206ENST00000562601 ABCA9Q8IUA7 1624 aa9.27□□□□□ -0.93
CDH13-206ENST00000562601 SLAIN1Q8ND83 568 aa9.26□□□□□ -0.93
CDH13-206ENST00000562601 TEX14Q8IWB6 1497 aa9.26□□□□□ -0.93
CDH13-206ENST00000562601 COL17A1Q9UMD9 1497 aaPredicted RBP9.25□□□□□ -0.93
CDH13-206ENST00000562601 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.25□□□□□ -0.93
CDH13-206ENST00000562601 TTC37Q6PGP7 1564 aa9.24□□□□□ -0.93
CDH13-206ENST00000562601 KIF14Q15058 1648 aa9.24□□□□□ -0.93
CDH13-206ENST00000562601 FYCO1Q9BQS8 1478 aa9.24□□□□□ -0.93
CDH13-206ENST00000562601 CDK11AQ9UQ88 783 aaPredicted RBP9.24□□□□□ -0.93
CDH13-206ENST00000562601 MAGI3Q5TCQ9 1506 aa9.24□□□□□ -0.93
CDH13-206ENST00000562601 PLCB2Q00722 1185 aa9.23□□□□□ -0.93
CDH13-206ENST00000562601 TMC2Q8TDI7 906 aa9.23□□□□□ -0.93
CDH13-206ENST00000562601 CCDC18Q5T9S5 1454 aa9.22□□□□□ -0.93
CDH13-206ENST00000562601 TROQ12816 1431 aaPredicted RBP9.21□□□□□ -0.94
CDH13-206ENST00000562601 RAPGEF3O95398 923 aa9.2□□□□□ -0.94
CDH13-206ENST00000562601 MYO5CQ9NQX4 1742 aa9.19□□□□□ -0.94
CDH13-206ENST00000562601 SNPHO15079 494 aa9.19□□□□□ -0.94
CDH13-206ENST00000562601 ST18O60284 1047 aa9.19□□□□□ -0.94
CDH13-206ENST00000562601 FANCAO15360 1455 aa9.18□□□□□ -0.94
CDH13-206ENST00000562601 PDE4AP27815 886 aa9.18□□□□□ -0.94
CDH13-206ENST00000562601 CDC42BPBQ9Y5S2 1711 aa9.17□□□□□ -0.94
CDH13-206ENST00000562601 ARAP3Q8WWN8 1544 aa9.17□□□□□ -0.94
CDH13-206ENST00000562601 NEO1Q92859 1461 aa9.17□□□□□ -0.94
CDH13-206ENST00000562601 PLCH2O75038 1416 aa9.17□□□□□ -0.94
CDH13-206ENST00000562601 AKNAQ7Z591 1439 aa9.17□□□□□ -0.94
CDH13-206ENST00000562601 VPS8Q8N3P4 1428 aa9.17□□□□□ -0.94
CDH13-206ENST00000562601 C2orf72A6NCS6 295 aa9.16□□□□□ -0.94
CDH13-206ENST00000562601 KIF3CO14782 793 aa9.16□□□□□ -0.94
CDH13-206ENST00000562601 TMEM92Q6UXU6 159 aa9.16□□□□□ -0.94
CDH13-206ENST00000562601 GPHNQ9NQX3 736 aaPredicted RBP9.16□□□□□ -0.94
CDH13-206ENST00000562601 CDC42BPAQ5VT25 1732 aa9.16□□□□□ -0.94
CDH13-206ENST00000562601 CFAP74Q9C0B2 1584 aa9.16□□□□□ -0.94
CDH13-206ENST00000562601 ARHGAP5Q13017 1502 aa9.15□□□□□ -0.94
CDH13-206ENST00000562601 MTUS2Q5JR59 1369 aa9.15□□□□□ -0.94
CDH13-206ENST00000562601 EFCAB2Q5VUJ9 269 aa9.15□□□□□ -0.94
CDH13-206ENST00000562601 FRMPD1Q5SYB0 1578 aa9.15□□□□□ -0.95
CDH13-206ENST00000562601 PHLDB1Q86UU1 1377 aa9.14□□□□□ -0.95
CDH13-206ENST00000562601 CRISPLD2Q9H0B8 497 aa9.14□□□□□ -0.95
CDH13-206ENST00000562601 ZNF777Q9ULD5 760 aaPredicted RBP9.14□□□□□ -0.95
CDH13-206ENST00000562601 ADGRL1O94910 1474 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms