RNA–Protein interactions for RNA: ENST00000562510.1

SNX29-201, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-201ENST00000562510 VGFO15240 615 aaPredicted RBP11.55□□□□□ -0.56
SNX29-201ENST00000562510 GOLGA2Q08379 1002 aa11.55□□□□□ -0.56
SNX29-201ENST00000562510 SLC39A7Q92504 469 aa11.55□□□□□ -0.56
SNX29-201ENST00000562510 KCNH8Q96L42 1107 aa11.55□□□□□ -0.56
SNX29-201ENST00000562510 TAOK2Q9UL54 1235 aa11.55□□□□□ -0.56
SNX29-201ENST00000562510 HECW1Q76N89 1606 aa11.54□□□□□ -0.56
SNX29-201ENST00000562510 METRNQ9UJH8 293 aa11.54□□□□□ -0.56
SNX29-201ENST00000562510 CCDC18Q5T9S5 1454 aa11.54□□□□□ -0.56
SNX29-201ENST00000562510 LRRC9Q6ZRR7 1453 aa11.54□□□□□ -0.56
SNX29-201ENST00000562510 RAPGEF6Q8TEU7 1601 aa11.53□□□□□ -0.56
SNX29-201ENST00000562510 NUP153P49790 1475 aaKnown RBP11.53□□□□□ -0.56
SNX29-201ENST00000562510 PCGF6Q9BYE7 350 aa11.53□□□□□ -0.56
SNX29-201ENST00000562510 ABCA8O94911 1581 aa11.53□□□□□ -0.56
SNX29-201ENST00000562510 PHLDB1Q86UU1 1377 aa11.53□□□□□ -0.56
SNX29-201ENST00000562510 CFAP43Q8NDM7 1665 aa11.52□□□□□ -0.56
SNX29-201ENST00000562510 C7P10643 843 aa11.52□□□□□ -0.57
SNX29-201ENST00000562510 ZCCHC11Q5TAX3 1644 aaKnown RBP11.5□□□□□ -0.57
SNX29-201ENST00000562510 LRRIQ1Q96JM4 1722 aa11.5□□□□□ -0.57
SNX29-201ENST00000562510 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.5□□□□□ -0.57
SNX29-201ENST00000562510 AMER1Q5JTC6 1135 aaPredicted RBP11.5□□□□□ -0.57
SNX29-201ENST00000562510 ZFP91Q96JP5 570 aaPredicted RBP11.5□□□□□ -0.57
SNX29-201ENST00000562510 CABP2Q9NPB3 220 aa11.5□□□□□ -0.57
SNX29-201ENST00000562510 ARAP3Q8WWN8 1544 aa11.5□□□□□ -0.57
SNX29-201ENST00000562510 SEC24BO95487 1268 aa11.49□□□□□ -0.57
SNX29-201ENST00000562510 MTUS2Q5JR59 1369 aa11.49□□□□□ -0.57
SNX29-201ENST00000562510 ARID3CA6NKF2 412 aa11.48□□□□□ -0.57
SNX29-201ENST00000562510 MKRN3Q13064 507 aaKnown RBP11.48□□□□□ -0.57
SNX29-201ENST00000562510 CDK13Q14004 1512 aaKnown RBP11.48□□□□□ -0.57
SNX29-201ENST00000562510 ATP10BO94823 1461 aa11.47□□□□□ -0.57
SNX29-201ENST00000562510 CDK11AQ9UQ88 783 aaPredicted RBP11.47□□□□□ -0.57
SNX29-201ENST00000562510 IER5LQ5T953 404 aa11.46□□□□□ -0.57
SNX29-201ENST00000562510 EHBP1L1Q8N3D4 1523 aa11.45□□□□□ -0.58
SNX29-201ENST00000562510 PTPRMP28827 1452 aa11.45□□□□□ -0.58
SNX29-201ENST00000562510 STK25O00506 426 aa11.45□□□□□ -0.58
SNX29-201ENST00000562510 RTN4Q9NQC3 1192 aaKnown RBP11.45□□□□□ -0.58
SNX29-201ENST00000562510 STK24Q9Y6E0 443 aa11.44□□□□□ -0.58
SNX29-201ENST00000562510 PLEKHD1A6NEE1 506 aa11.43□□□□□ -0.58
SNX29-201ENST00000562510 PLCG2P16885 1265 aa11.43□□□□□ -0.58
SNX29-201ENST00000562510 BCL11BQ9C0K0 894 aaPredicted RBP11.43□□□□□ -0.58
SNX29-201ENST00000562510 RRBP1Q9P2E9 1410 aaKnown RBP11.43□□□□□ -0.58
SNX29-201ENST00000562510 RAPGEF3O95398 923 aa11.42□□□□□ -0.58
SNX29-201ENST00000562510 LHX8Q68G74 356 aa11.42□□□□□ -0.58
SNX29-201ENST00000562510 NCOA2Q15596 1464 aa11.42□□□□□ -0.58
SNX29-201ENST00000562510 TROQ12816 1431 aaPredicted RBP11.42□□□□□ -0.58
SNX29-201ENST00000562510 COLQQ9Y215 455 aaPredicted RBP11.41□□□□□ -0.58
SNX29-201ENST00000562510 ARID4BQ4LE39 1312 aaPredicted RBP11.4□□□□□ -0.58
SNX29-201ENST00000562510 NEO1Q92859 1461 aa11.4□□□□□ -0.58
SNX29-201ENST00000562510 CCNB3Q8WWL7 1395 aa11.4□□□□□ -0.59
SNX29-201ENST00000562510 SUPT6HQ7KZ85 1726 aaKnown RBP11.39□□□□□ -0.59
SNX29-201ENST00000562510 EFCAB3Q8N7B9 438 aa11.39□□□□□ -0.59
SNX29-201ENST00000562510 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.39□□□□□ -0.59
SNX29-201ENST00000562510 MYOM3Q5VTT5 1437 aa11.37□□□□□ -0.59
SNX29-201ENST00000562510 POTEFA5A3E0 1075 aa11.37□□□□□ -0.59
SNX29-201ENST00000562510 CHGAP10645 457 aaKnown RBP11.37□□□□□ -0.59
SNX29-201ENST00000562510 OCEL1Q9H607 264 aa11.37□□□□□ -0.59
SNX29-201ENST00000562510 IRX5P78411 483 aaPredicted RBP11.36□□□□□ -0.59
SNX29-201ENST00000562510 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.36□□□□□ -0.59
SNX29-201ENST00000562510 LMTK3Q96Q04 1460 aa11.36□□□□□ -0.59
SNX29-201ENST00000562510 FGD6Q6ZV73 1430 aa11.35□□□□□ -0.59
SNX29-201ENST00000562510 ADAMTSL3P82987 1691 aa11.35□□□□□ -0.59
SNX29-201ENST00000562510 MIA2Q96PC5 1412 aa11.34□□□□□ -0.59
SNX29-201ENST00000562510 POTEB2H3BUK9 544 aa11.33□□□□□ -0.6
SNX29-201ENST00000562510 FAM50AQ14320 339 aaKnown RBP11.33□□□□□ -0.6
SNX29-201ENST00000562510 CERKQ8TCT0 537 aa11.33□□□□□ -0.6
SNX29-201ENST00000562510 ABCA9Q8IUA7 1624 aa11.33□□□□□ -0.6
SNX29-201ENST00000562510 KIF14Q15058 1648 aa11.32□□□□□ -0.6
SNX29-201ENST00000562510 POGZQ7Z3K3 1410 aa11.32□□□□□ -0.6
SNX29-201ENST00000562510 GPATCH8Q9UKJ3 1502 aaKnown RBP11.31□□□□□ -0.6
SNX29-201ENST00000562510 HSPA2P54652 639 aa11.31□□□□□ -0.6
SNX29-201ENST00000562510 DENND4BO75064 1496 aaPredicted RBP11.31□□□□□ -0.6
SNX29-201ENST00000562510 AKNAQ7Z591 1439 aa11.3□□□□□ -0.6
SNX29-201ENST00000562510 SOX12O15370 315 aa11.3□□□□□ -0.6
SNX29-201ENST00000562510 HS6ST3Q8IZP7 471 aa11.3□□□□□ -0.6
SNX29-201ENST00000562510 TCOF1Q13428 1488 aaKnown RBP11.3□□□□□ -0.6
SNX29-201ENST00000562510 CFDP1Q9UEE9 299 aaPredicted RBP11.29□□□□□ -0.6
SNX29-201ENST00000562510 PTPN23Q9H3S7 1636 aa11.28□□□□□ -0.6
SNX29-201ENST00000562510 PDCD7Q8N8D1 485 aaKnown RBP11.28□□□□□ -0.6
SNX29-201ENST00000562510 PHF8Q9UPP1 1060 aa11.28□□□□□ -0.6
SNX29-201ENST00000562510 MAGI2Q86UL8 1455 aa11.27□□□□□ -0.6
SNX29-201ENST00000562510 BCORL1Q5H9F3 1711 aa11.27□□□□□ -0.61
SNX29-201ENST00000562510 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.27□□□□□ -0.61
SNX29-201ENST00000562510 ITGAEP38570 1179 aa11.27□□□□□ -0.61
SNX29-201ENST00000562510 FANCAO15360 1455 aa11.26□□□□□ -0.61
SNX29-201ENST00000562510 FRMPD1Q5SYB0 1578 aa11.26□□□□□ -0.61
SNX29-201ENST00000562510 MAMSTRQ6ZN01 415 aa11.26□□□□□ -0.61
SNX29-201ENST00000562510 MADDQ8WXG6 1647 aa11.26□□□□□ -0.61
SNX29-201ENST00000562510 ZNF644Q9H582 1327 aaPredicted RBP11.26□□□□□ -0.61
SNX29-201ENST00000562510 ITSN2Q9NZM3 1697 aa11.25□□□□□ -0.61
SNX29-201ENST00000562510 G3V3G9 751 aa11.25□□□□□ -0.61
SNX29-201ENST00000562510 POTEJP0CG39 1038 aa11.25□□□□□ -0.61
SNX29-201ENST00000562510 NLRP6P59044 892 aa11.25□□□□□ -0.61
SNX29-201ENST00000562510 DPY19L2Q6NUT2 758 aa11.25□□□□□ -0.61
SNX29-201ENST00000562510 SCUBE2Q9NQ36 999 aa11.25□□□□□ -0.61
SNX29-201ENST00000562510 ARHGEF40Q8TER5 1519 aa11.25□□□□□ -0.61
SNX29-201ENST00000562510 TTC37Q6PGP7 1564 aa11.24□□□□□ -0.61
SNX29-201ENST00000562510 CDC42BPAQ5VT25 1732 aa11.23□□□□□ -0.61
SNX29-201ENST00000562510 SOCS7O14512 581 aa11.23□□□□□ -0.61
SNX29-201ENST00000562510 L3MBTL3Q96JM7 780 aaPredicted RBP11.23□□□□□ -0.61
SNX29-201ENST00000562510 ZNF777Q9ULD5 760 aaPredicted RBP11.23□□□□□ -0.61
SNX29-201ENST00000562510 PLCH2O75038 1416 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms