RNA–Protein interactions for RNA: ENST00000562474.1

TSC2-218, Transcript of TSC complex subunit 2, humanhuman

TSL 5

Gene TSC2, Length 589 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-218ENST00000562474 RNF17Q9BXT8 1623 aaKnown RBP17.16■□□□□ 0.34
TSC2-218ENST00000562474 ADGRL2O95490 1459 aa17.15■□□□□ 0.34
TSC2-218ENST00000562474 ANKRD30AQ9BXX3 1397 aa17.15■□□□□ 0.34
TSC2-218ENST00000562474 NCOA1Q15788 1441 aa17.14■□□□□ 0.33
TSC2-218ENST00000562474 MROH2AA6NES4 1674 aa17.13■□□□□ 0.33
TSC2-218ENST00000562474 ESF1Q9H501 851 aaKnown RBP17.11■□□□□ 0.33
TSC2-218ENST00000562474 DEPDC5O75140 1603 aa17.1■□□□□ 0.33
TSC2-218ENST00000562474 GCC2Q8IWJ2 1684 aa17.1■□□□□ 0.33
TSC2-218ENST00000562474 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.09■□□□□ 0.33
TSC2-218ENST00000562474 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.09■□□□□ 0.33
TSC2-218ENST00000562474 ERBINQ96RT1 1412 aa17.09■□□□□ 0.33
TSC2-218ENST00000562474 CAMSAP1Q5T5Y3 1602 aa17.08■□□□□ 0.32
TSC2-218ENST00000562474 KDM5DQ9BY66 1539 aa17.08■□□□□ 0.32
TSC2-218ENST00000562474 ABCC3O15438 1527 aa17.07■□□□□ 0.32
TSC2-218ENST00000562474 ZC3H13Q5T200 1668 aaKnown RBP17.07■□□□□ 0.32
TSC2-218ENST00000562474 PREX1Q8TCU6 1659 aa17.07■□□□□ 0.32
TSC2-218ENST00000562474 PRDM15P57071 1507 aaPredicted RBP17.06■□□□□ 0.32
TSC2-218ENST00000562474 SETD1BQ9UPS6 1966 aaKnown RBP17.06■□□□□ 0.32
TSC2-218ENST00000562474 ANKRD50Q9ULJ7 1429 aa17.05■□□□□ 0.32
TSC2-218ENST00000562474 CNTLNQ9NXG0 1405 aa17.04■□□□□ 0.32
TSC2-218ENST00000562474 ZMYM3Q14202 1370 aa17.03■□□□□ 0.32
TSC2-218ENST00000562474 UNC13BO14795 1591 aa17.03■□□□□ 0.32
TSC2-218ENST00000562474 WASHC2CQ9Y4E1 1318 aa17.03■□□□□ 0.32
TSC2-218ENST00000562474 ROCK1Q13464 1354 aa17.02■□□□□ 0.32
TSC2-218ENST00000562474 MYO3AQ8NEV4 1616 aa17.01■□□□□ 0.31
TSC2-218ENST00000562474 FBXO31Q5XUX0 539 aaPredicted RBP17■□□□□ 0.31
TSC2-218ENST00000562474 LMTK3Q96Q04 1460 aa16.99■□□□□ 0.31
TSC2-218ENST00000562474 VWDEQ8N2E2 1590 aa16.99■□□□□ 0.31
TSC2-218ENST00000562474 NAIPQ13075 1403 aa16.98■□□□□ 0.31
TSC2-218ENST00000562474 HSPA2P54652 639 aa16.98■□□□□ 0.31
TSC2-218ENST00000562474 FAM135AQ9P2D6 1515 aa16.97■□□□□ 0.31
TSC2-218ENST00000562474 PZPP20742 1482 aa16.96■□□□□ 0.31
TSC2-218ENST00000562474 TET3O43151 1660 aa16.96■□□□□ 0.31
TSC2-218ENST00000562474 IQGAP3Q86VI3 1631 aa16.96■□□□□ 0.3
TSC2-218ENST00000562474 E9PCH4 1651 aa16.95■□□□□ 0.3
TSC2-218ENST00000562474 KANK1Q14678 1352 aa16.95■□□□□ 0.3
TSC2-218ENST00000562474 PPP6R1Q9UPN7 881 aa16.94■□□□□ 0.3
TSC2-218ENST00000562474 EFCAB6Q5THR3 1501 aa16.94■□□□□ 0.3
TSC2-218ENST00000562474 ZNF142P52746 1687 aaPredicted RBP16.94■□□□□ 0.3
TSC2-218ENST00000562474 HFM1A2PYH4 1435 aa16.93■□□□□ 0.3
TSC2-218ENST00000562474 UHRF1BP1Q6BDS2 1440 aa16.93■□□□□ 0.3
TSC2-218ENST00000562474 ERVK-7P63135 1459 aa16.93■□□□□ 0.3
TSC2-218ENST00000562474 MYO5BQ9ULV0 1848 aa16.92■□□□□ 0.3
TSC2-218ENST00000562474 NPATQ14207 1427 aa16.92■□□□□ 0.3
TSC2-218ENST00000562474 CEP170BQ9Y4F5 1589 aaPredicted RBP16.92■□□□□ 0.3
TSC2-218ENST00000562474 LMTK2Q8IWU2 1503 aa16.91■□□□□ 0.3
TSC2-218ENST00000562474 SPATA31D1Q6ZQQ2 1576 aa16.91■□□□□ 0.3
TSC2-218ENST00000562474 TNRQ92752 1358 aa16.9■□□□□ 0.3
TSC2-218ENST00000562474 NUP155O75694 1391 aa16.89■□□□□ 0.3
TSC2-218ENST00000562474 SYNMO15061 1565 aa16.89■□□□□ 0.3
TSC2-218ENST00000562474 STRCQ7RTU9 1775 aa16.89■□□□□ 0.3
TSC2-218ENST00000562474 TRIM52Q96A61 297 aa16.87■□□□□ 0.29
TSC2-218ENST00000562474 PIK3C2BO00750 1634 aa16.87■□□□□ 0.29
TSC2-218ENST00000562474 UGGT1Q9NYU2 1555 aa16.86■□□□□ 0.29
TSC2-218ENST00000562474 SPHKAPQ2M3C7 1700 aa16.85■□□□□ 0.29
TSC2-218ENST00000562474 UBR1Q8IWV7 1749 aa16.85■□□□□ 0.29
TSC2-218ENST00000562474 ARHGAP31Q2M1Z3 1444 aa16.85■□□□□ 0.29
TSC2-218ENST00000562474 A2ML1A8K2U0 1454 aa16.84■□□□□ 0.29
TSC2-218ENST00000562474 POLR1AO95602 1720 aaPredicted RBP16.82■□□□□ 0.28
TSC2-218ENST00000562474 SETD5Q9C0A6 1442 aa16.82■□□□□ 0.28
TSC2-218ENST00000562474 RAB3GAP2Q9H2M9 1393 aa16.8■□□□□ 0.28
TSC2-218ENST00000562474 NOS1P29475 1434 aa16.79■□□□□ 0.28
TSC2-218ENST00000562474 NLRP1Q9C000 1473 aa16.79■□□□□ 0.28
TSC2-218ENST00000562474 FOXD1Q16676 465 aa16.78■□□□□ 0.28
TSC2-218ENST00000562474 RPRD2Q5VT52 1461 aaKnown RBP16.77■□□□□ 0.28
TSC2-218ENST00000562474 NCKAP5LQ9HCH0 1330 aa16.76■□□□□ 0.27
TSC2-218ENST00000562474 CLTCL1P53675 1640 aa16.76■□□□□ 0.27
TSC2-218ENST00000562474 NEURL4Q96JN8 1562 aa16.74■□□□□ 0.27
TSC2-218ENST00000562474 PKD2Q13563 968 aa16.74■□□□□ 0.27
TSC2-218ENST00000562474 IDI1Q13907 227 aa16.74■□□□□ 0.27
TSC2-218ENST00000562474 SLC4A1APQ9BWU0 796 aaKnown RBP16.74■□□□□ 0.27
TSC2-218ENST00000562474 SENP3Q9H4L4 574 aaPredicted RBP16.74■□□□□ 0.27
TSC2-218ENST00000562474 KIF1BO60333 1816 aa16.74■□□□□ 0.27
TSC2-218ENST00000562474 ADGRB3O60242 1522 aa16.74■□□□□ 0.27
TSC2-218ENST00000562474 TMEM131LA2VDJ0 1609 aa16.73■□□□□ 0.27
TSC2-218ENST00000562474 CHGAP10645 457 aaKnown RBP16.72■□□□□ 0.27
TSC2-218ENST00000562474 STAG3Q9UJ98 1225 aa16.71■□□□□ 0.27
TSC2-218ENST00000562474 KDM5AP29375 1690 aaKnown RBP16.7■□□□□ 0.26
TSC2-218ENST00000562474 PLA2R1Q13018 1463 aa16.7■□□□□ 0.26
TSC2-218ENST00000562474 TRPM2O94759 1503 aa16.7■□□□□ 0.26
TSC2-218ENST00000562474 MPHOSPH9Q99550 1183 aa16.69■□□□□ 0.26
TSC2-218ENST00000562474 IQGAP1P46940 1657 aa16.69■□□□□ 0.26
TSC2-218ENST00000562474 THEMISQ8N1K5 641 aaPredicted RBP16.67■□□□□ 0.26
TSC2-218ENST00000562474 PTPRTO14522 1441 aa16.67■□□□□ 0.26
TSC2-218ENST00000562474 NUTM2DQ5VT03 806 aaPredicted RBP16.66■□□□□ 0.26
TSC2-218ENST00000562474 TRIM26Q12899 539 aaPredicted RBP16.65■□□□□ 0.26
TSC2-218ENST00000562474 ARHGAP23Q9P227 1491 aa16.65■□□□□ 0.26
TSC2-218ENST00000562474 SLIT1O75093 1534 aa16.65■□□□□ 0.26
TSC2-218ENST00000562474 LTKP29376 864 aa16.64■□□□□ 0.25
TSC2-218ENST00000562474 SLC52A1Q9NWF4 448 aa16.64■□□□□ 0.25
TSC2-218ENST00000562474 SCAF11Q99590 1463 aaKnown RBP16.62■□□□□ 0.25
TSC2-218ENST00000562474 STRCP1A6NGW2 1772 aa16.62■□□□□ 0.25
TSC2-218ENST00000562474 ANKLE2Q86XL3 938 aa16.62■□□□□ 0.25
TSC2-218ENST00000562474 TMEM2Q9UHN6 1383 aa16.62■□□□□ 0.25
TSC2-218ENST00000562474 NPHP4O75161 1426 aaPredicted RBP16.62■□□□□ 0.25
TSC2-218ENST00000562474 TXNDC2Q86VQ3 553 aa16.61■□□□□ 0.25
TSC2-218ENST00000562474 RIMS2Q9UQ26 1411 aa16.61■□□□□ 0.25
TSC2-218ENST00000562474 PPLO60437 1756 aa16.59■□□□□ 0.25
TSC2-218ENST00000562474 ZFYVE9O95405 1425 aa16.59■□□□□ 0.25
TSC2-218ENST00000562474 ZNF326Q5BKZ1 582 aaKnown RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms