RNA–Protein interactions for RNA: ENST00000562425.1

PKD1-226, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 608 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-226ENST00000562425 KIF3BO15066 747 aa25.11■■□□□ 1.61
PKD1-226ENST00000562425 ANKRD30AQ9BXX3 1397 aa25.08■■□□□ 1.61
PKD1-226ENST00000562425 MROH2AA6NES4 1674 aa25.08■■□□□ 1.61
PKD1-226ENST00000562425 CHIC2Q9UKJ5 165 aa25.08■■□□□ 1.61
PKD1-226ENST00000562425 CROCC2H7BZ55 1655 aa25.07■■□□□ 1.6
PKD1-226ENST00000562425 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.07■■□□□ 1.6
PKD1-226ENST00000562425 RRP7BPQ9NSQ0 103 aa25.07■■□□□ 1.6
PKD1-226ENST00000562425 KIF15Q9NS87 1388 aa25.06■■□□□ 1.6
PKD1-226ENST00000562425 NPATQ14207 1427 aa25.05■■□□□ 1.6
PKD1-226ENST00000562425 DUOX2Q9NRD8 1548 aa25.05■■□□□ 1.6
PKD1-226ENST00000562425 NCOA1Q15788 1441 aa25.02■■□□□ 1.6
PKD1-226ENST00000562425 ADGRL2O95490 1459 aa24.99■■□□□ 1.59
PKD1-226ENST00000562425 RRBP1Q9P2E9 1410 aaKnown RBP24.99■■□□□ 1.59
PKD1-226ENST00000562425 IQSEC2Q5JU85 1478 aa24.98■■□□□ 1.59
PKD1-226ENST00000562425 ERBINQ96RT1 1412 aa24.98■■□□□ 1.59
PKD1-226ENST00000562425 ZMYM3Q14202 1370 aa24.97■■□□□ 1.59
PKD1-226ENST00000562425 WASHC2CQ9Y4E1 1318 aa24.97■■□□□ 1.59
PKD1-226ENST00000562425 ITGAEP38570 1179 aa24.97■■□□□ 1.59
PKD1-226ENST00000562425 EIF2AK4Q9P2K8 1649 aaKnown RBP24.97■■□□□ 1.59
PKD1-226ENST00000562425 FAM135AQ9P2D6 1515 aa24.95■■□□□ 1.58
PKD1-226ENST00000562425 LTBP4Q8N2S1 1624 aa24.94■■□□□ 1.58
PKD1-226ENST00000562425 PTPRKQ15262 1439 aa24.93■■□□□ 1.58
PKD1-226ENST00000562425 CAMSAP1Q5T5Y3 1602 aa24.93■■□□□ 1.58
PKD1-226ENST00000562425 ROCK1Q13464 1354 aa24.93■■□□□ 1.58
PKD1-226ENST00000562425 ZNF142P52746 1687 aaPredicted RBP24.91■■□□□ 1.58
PKD1-226ENST00000562425 CLTCQ00610 1675 aaKnown RBP24.91■■□□□ 1.58
PKD1-226ENST00000562425 KDM5DQ9BY66 1539 aa24.9■■□□□ 1.58
PKD1-226ENST00000562425 RNF17Q9BXT8 1623 aaKnown RBP24.9■■□□□ 1.58
PKD1-226ENST00000562425 PLA2R1Q13018 1463 aa24.88■■□□□ 1.57
PKD1-226ENST00000562425 ANKRD50Q9ULJ7 1429 aa24.87■■□□□ 1.57
PKD1-226ENST00000562425 MYO3AQ8NEV4 1616 aa24.87■■□□□ 1.57
PKD1-226ENST00000562425 KANK1Q14678 1352 aa24.87■■□□□ 1.57
PKD1-226ENST00000562425 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.86■■□□□ 1.575e-7■□□□□ 9.7
PKD1-226ENST00000562425 DISP3Q9P2K9 1392 aa24.84■■□□□ 1.57
PKD1-226ENST00000562425 PKD2Q13563 968 aa24.84■■□□□ 1.57
PKD1-226ENST00000562425 CEP170BQ9Y4F5 1589 aaPredicted RBP24.84■■□□□ 1.57
PKD1-226ENST00000562425 MROH1Q8NDA8 1641 aa24.81■■□□□ 1.56
PKD1-226ENST00000562425 ABCC3O15438 1527 aa24.81■■□□□ 1.56
PKD1-226ENST00000562425 ZC3H13Q5T200 1668 aaKnown RBP24.8■■□□□ 1.56
PKD1-226ENST00000562425 PRDM15P57071 1507 aaPredicted RBP24.8■■□□□ 1.56
PKD1-226ENST00000562425 PZPP20742 1482 aa24.79■■□□□ 1.56
PKD1-226ENST00000562425 DEPDC5O75140 1603 aa24.78■■□□□ 1.56
PKD1-226ENST00000562425 SPATA31D1Q6ZQQ2 1576 aa24.77■■□□□ 1.56
PKD1-226ENST00000562425 NCKAP5LQ9HCH0 1330 aa24.77■■□□□ 1.56
PKD1-226ENST00000562425 FBXO31Q5XUX0 539 aaPredicted RBP24.76■■□□□ 1.55
PKD1-226ENST00000562425 A2ML1A8K2U0 1454 aa24.74■■□□□ 1.55
PKD1-226ENST00000562425 TNRQ92752 1358 aa24.73■■□□□ 1.55
PKD1-226ENST00000562425 ZNF335Q9H4Z2 1342 aaPredicted RBP24.72■■□□□ 1.55
PKD1-226ENST00000562425 ARHGAP31Q2M1Z3 1444 aa24.71■■□□□ 1.55
PKD1-226ENST00000562425 CEP152O94986 1710 aa24.7■■□□□ 1.54
PKD1-226ENST00000562425 LMTK2Q8IWU2 1503 aa24.7■■□□□ 1.54
PKD1-226ENST00000562425 VWDEQ8N2E2 1590 aa24.69■■□□□ 1.54
PKD1-226ENST00000562425 SOCS7O14512 581 aa24.69■■□□□ 1.54
PKD1-226ENST00000562425 ILDR2Q71H61 639 aa24.69■■□□□ 1.54
PKD1-226ENST00000562425 NAIPQ13075 1403 aa24.67■■□□□ 1.54
PKD1-226ENST00000562425 HFM1A2PYH4 1435 aa24.65■■□□□ 1.54
PKD1-226ENST00000562425 UNC13BO14795 1591 aa24.65■■□□□ 1.54
PKD1-226ENST00000562425 NUP155O75694 1391 aa24.65■■□□□ 1.54
PKD1-226ENST00000562425 ERVK-7P63135 1459 aa24.64■■□□□ 1.54
PKD1-226ENST00000562425 POLR1AO95602 1720 aaPredicted RBP24.64■■□□□ 1.54
PKD1-226ENST00000562425 UBAP1LF5GYI3 381 aa24.64■■□□□ 1.54
PKD1-226ENST00000562425 NLRP1Q9C000 1473 aa24.63■■□□□ 1.53
PKD1-226ENST00000562425 CPS1P31327 1500 aa24.6■■□□□ 1.53
PKD1-226ENST00000562425 EFCAB6Q5THR3 1501 aa24.6■■□□□ 1.53
PKD1-226ENST00000562425 THEMISQ8N1K5 641 aaPredicted RBP24.59■■□□□ 1.53
PKD1-226ENST00000562425 GCC2Q8IWJ2 1684 aa24.59■■□□□ 1.53
PKD1-226ENST00000562425 RPRD2Q5VT52 1461 aaKnown RBP24.58■■□□□ 1.53
PKD1-226ENST00000562425 NEURL4Q96JN8 1562 aa24.58■■□□□ 1.52
PKD1-226ENST00000562425 TET3O43151 1660 aa24.56■■□□□ 1.52
PKD1-226ENST00000562425 IQGAP3Q86VI3 1631 aa24.55■■□□□ 1.52
PKD1-226ENST00000562425 TRIM52Q96A61 297 aa24.55■■□□□ 1.52
PKD1-226ENST00000562425 CFAP65Q6ZU64 1925 aaKnown RBP24.55■■□□□ 1.52
PKD1-226ENST00000562425 ACIN1Q9UKV3 1341 aaKnown RBP24.54■■□□□ 1.52
PKD1-226ENST00000562425 ANKLE2Q86XL3 938 aa24.53■■□□□ 1.52
PKD1-226ENST00000562425 NOS1P29475 1434 aa24.52■■□□□ 1.52
PKD1-226ENST00000562425 UGGT1Q9NYU2 1555 aa24.52■■□□□ 1.52
PKD1-226ENST00000562425 SLC52A1Q9NWF4 448 aa24.52■■□□□ 1.52
PKD1-226ENST00000562425 STAG3Q9UJ98 1225 aa24.5■■□□□ 1.51
PKD1-226ENST00000562425 MED14O60244 1454 aa24.5■■□□□ 1.51
PKD1-226ENST00000562425 TOM1O60784 492 aa24.49■■□□□ 1.51
PKD1-226ENST00000562425 IDI1Q13907 227 aa24.48■■□□□ 1.51
PKD1-226ENST00000562425 SETD5Q9C0A6 1442 aa24.46■■□□□ 1.51
PKD1-226ENST00000562425 NPHP4O75161 1426 aaPredicted RBP24.45■■□□□ 1.51
PKD1-226ENST00000562425 SLC4A1APQ9BWU0 796 aaKnown RBP24.44■■□□□ 1.5
PKD1-226ENST00000562425 E9PCH4 1651 aa24.43■■□□□ 1.5
PKD1-226ENST00000562425 SYNMO15061 1565 aa24.43■■□□□ 1.5
PKD1-226ENST00000562425 IQGAP1P46940 1657 aa24.43■■□□□ 1.5
PKD1-226ENST00000562425 EID1Q9Y6B2 187 aa24.39■■□□□ 1.49
PKD1-226ENST00000562425 PIK3C2BO00750 1634 aa24.39■■□□□ 1.49
PKD1-226ENST00000562425 UBR1Q8IWV7 1749 aa24.38■■□□□ 1.49
PKD1-226ENST00000562425 SCAF1Q9H7N4 1312 aaKnown RBP24.38■■□□□ 1.49
PKD1-226ENST00000562425 HSPA1LP34931 641 aa24.38■■□□□ 1.49
PKD1-226ENST00000562425 PIP4K2BP78356 416 aa24.37■■□□□ 1.49
PKD1-226ENST00000562425 TXNDC2Q86VQ3 553 aa24.36■■□□□ 1.49
PKD1-226ENST00000562425 KDM5AP29375 1690 aaKnown RBP24.35■■□□□ 1.49
PKD1-226ENST00000562425 MED1Q15648 1581 aaPredicted RBP24.35■■□□□ 1.49
PKD1-226ENST00000562425 RAB3GAP2Q9H2M9 1393 aa24.35■■□□□ 1.49
PKD1-226ENST00000562425 TMEM2Q9UHN6 1383 aa24.35■■□□□ 1.49
PKD1-226ENST00000562425 CHGAP10645 457 aaKnown RBP24.35■■□□□ 1.49
PKD1-226ENST00000562425 HRCP23327 699 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms