RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 FAM135AQ9P2D6 1515 aa20.83■□□□□ 0.93
COMMD4-205ENST00000562310 DIP2CQ9Y2E4 1556 aa20.83■□□□□ 0.92
COMMD4-205ENST00000562310 A2MP01023 1474 aa20.82■□□□□ 0.92
COMMD4-205ENST00000562310 SLC4A1APQ9BWU0 796 aaKnown RBP20.82■□□□□ 0.92
COMMD4-205ENST00000562310 MYT1LQ9UL68 1186 aa20.82■□□□□ 0.92
COMMD4-205ENST00000562310 RNF17Q9BXT8 1623 aaKnown RBP20.82■□□□□ 0.92
COMMD4-205ENST00000562310 PRDM15P57071 1507 aaPredicted RBP20.8■□□□□ 0.92
COMMD4-205ENST00000562310 TIMELESSQ9UNS1 1208 aa20.79■□□□□ 0.92
COMMD4-205ENST00000562310 RAPGEF3O95398 923 aa20.77■□□□□ 0.92
COMMD4-205ENST00000562310 VWDEQ8N2E2 1590 aa20.76■□□□□ 0.91
COMMD4-205ENST00000562310 REREQ9P2R6 1566 aa20.76■□□□□ 0.91
COMMD4-205ENST00000562310 MROH1Q8NDA8 1641 aa20.75■□□□□ 0.91
COMMD4-205ENST00000562310 ANKRD30BQ9BXX2 1392 aa20.75■□□□□ 0.91
COMMD4-205ENST00000562310 TET3O43151 1660 aa20.75■□□□□ 0.91
COMMD4-205ENST00000562310 KANK1Q14678 1352 aa20.73■□□□□ 0.91
COMMD4-205ENST00000562310 ARHGEF40Q8TER5 1519 aa20.73■□□□□ 0.91
COMMD4-205ENST00000562310 PKD2Q13563 968 aa20.72■□□□□ 0.91
COMMD4-205ENST00000562310 RPRD2Q5VT52 1461 aaKnown RBP20.71■□□□□ 0.91
COMMD4-205ENST00000562310 SIN3AQ96ST3 1273 aa20.7■□□□□ 0.9
COMMD4-205ENST00000562310 TONSLQ96HA7 1378 aa20.7■□□□□ 0.9
COMMD4-205ENST00000562310 YEATS2Q9ULM3 1422 aa20.7■□□□□ 0.9
COMMD4-205ENST00000562310 ATP10AO60312 1499 aa20.69■□□□□ 0.9
COMMD4-205ENST00000562310 LMTK2Q8IWU2 1503 aa20.68■□□□□ 0.9
COMMD4-205ENST00000562310 KIF3BO15066 747 aa20.68■□□□□ 0.9
COMMD4-205ENST00000562310 NEUROD1Q13562 356 aa20.68■□□□□ 0.9
COMMD4-205ENST00000562310 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.68■□□□□ 0.9
COMMD4-205ENST00000562310 ZC3H13Q5T200 1668 aaKnown RBP20.67■□□□□ 0.9
COMMD4-205ENST00000562310 E9PCH4 1651 aa20.67■□□□□ 0.9
COMMD4-205ENST00000562310 CEP152O94986 1710 aa20.65■□□□□ 0.9
COMMD4-205ENST00000562310 AGLP35573 1532 aa20.65■□□□□ 0.9
COMMD4-205ENST00000562310 COL17A1Q9UMD9 1497 aaPredicted RBP20.65■□□□□ 0.9
COMMD4-205ENST00000562310 FOXD1Q16676 465 aa20.65■□□□□ 0.9
COMMD4-205ENST00000562310 EFCAB6Q5THR3 1501 aa20.64■□□□□ 0.9
COMMD4-205ENST00000562310 SPHKAPQ2M3C7 1700 aa20.63■□□□□ 0.89
COMMD4-205ENST00000562310 ABCC3O15438 1527 aa20.59■□□□□ 0.89
COMMD4-205ENST00000562310 TRPM2O94759 1503 aa20.59■□□□□ 0.89
COMMD4-205ENST00000562310 CAMSAP1Q5T5Y3 1602 aa20.58■□□□□ 0.89
COMMD4-205ENST00000562310 CCDC144AA2RUR9 1427 aa20.58■□□□□ 0.88
COMMD4-205ENST00000562310 PLA2R1Q13018 1463 aa20.56■□□□□ 0.88
COMMD4-205ENST00000562310 PTPRTO14522 1441 aa20.54■□□□□ 0.88
COMMD4-205ENST00000562310 PPP1R15AO75807 674 aaPredicted RBP20.53■□□□□ 0.88
COMMD4-205ENST00000562310 ILDR1Q86SU0 546 aaPredicted RBP20.52■□□□□ 0.88
COMMD4-205ENST00000562310 SIGLEC1Q9BZZ2 1709 aa20.51■□□□□ 0.87
COMMD4-205ENST00000562310 GGT6Q6P531 493 aa20.5■□□□□ 0.87
COMMD4-205ENST00000562310 PPP6R1Q9UPN7 881 aa20.5■□□□□ 0.87
COMMD4-205ENST00000562310 ARHGAP31Q2M1Z3 1444 aa20.49■□□□□ 0.87
COMMD4-205ENST00000562310 NEURL4Q96JN8 1562 aa20.49■□□□□ 0.87
COMMD4-205ENST00000562310 CLTCL1P53675 1640 aa20.48■□□□□ 0.87
COMMD4-205ENST00000562310 WASHC2CQ9Y4E1 1318 aa20.48■□□□□ 0.87
COMMD4-205ENST00000562310 L3MBTL2Q969R5 705 aa20.47■□□□□ 0.87
COMMD4-205ENST00000562310 NPATQ14207 1427 aa20.46■□□□□ 0.87
COMMD4-205ENST00000562310 CNTLNQ9NXG0 1405 aa20.45■□□□□ 0.86
COMMD4-205ENST00000562310 KIF1BO60333 1816 aa20.45■□□□□ 0.86
COMMD4-205ENST00000562310 CLTCQ00610 1675 aaKnown RBP20.43■□□□□ 0.86
COMMD4-205ENST00000562310 PREX1Q8TCU6 1659 aa20.42■□□□□ 0.86
COMMD4-205ENST00000562310 UHRF1BP1Q6BDS2 1440 aa20.41■□□□□ 0.86
COMMD4-205ENST00000562310 ZNF316A6NFI3 1004 aaPredicted RBP20.4■□□□□ 0.86
COMMD4-205ENST00000562310 NOS1P29475 1434 aa20.4■□□□□ 0.86
COMMD4-205ENST00000562310 SPATA31E1Q6ZUB1 1445 aa20.4■□□□□ 0.86
COMMD4-205ENST00000562310 PIK3C2BO00750 1634 aa20.39■□□□□ 0.86
COMMD4-205ENST00000562310 MROH2AA6NES4 1674 aa20.38■□□□□ 0.85
COMMD4-205ENST00000562310 SYNMO15061 1565 aa20.37■□□□□ 0.85
COMMD4-205ENST00000562310 CFAP65Q6ZU64 1925 aaKnown RBP20.37■□□□□ 0.85
COMMD4-205ENST00000562310 ADGRB3O60242 1522 aa20.36■□□□□ 0.85
COMMD4-205ENST00000562310 UGGT1Q9NYU2 1555 aa20.34■□□□□ 0.85
COMMD4-205ENST00000562310 RALGAPBQ86X10 1494 aa20.34■□□□□ 0.85
COMMD4-205ENST00000562310 IFT172Q9UG01 1749 aa20.33■□□□□ 0.85
COMMD4-205ENST00000562310 ERVK-7P63135 1459 aa20.33■□□□□ 0.85
COMMD4-205ENST00000562310 STAC3Q96MF2 364 aa20.32■□□□□ 0.84
COMMD4-205ENST00000562310 SPATA31D1Q6ZQQ2 1576 aa20.32■□□□□ 0.84
COMMD4-205ENST00000562310 ARID4BQ4LE39 1312 aaPredicted RBP20.31■□□□□ 0.84
COMMD4-205ENST00000562310 PRAG1Q86YV5 1406 aa20.3■□□□□ 0.84
COMMD4-205ENST00000562310 KDM4FA0A1W2PPD8 638 aa20.3■□□□□ 0.84
COMMD4-205ENST00000562310 TRPM1Q7Z4N2 1603 aa20.3■□□□□ 0.84
COMMD4-205ENST00000562310 FER1L4A9Z1Z3 1794 aa20.29■□□□□ 0.84
COMMD4-205ENST00000562310 MADDQ8WXG6 1647 aa20.29■□□□□ 0.84
COMMD4-205ENST00000562310 DCAF11Q8TEB1 546 aa20.29■□□□□ 0.84
COMMD4-205ENST00000562310 ESF1Q9H501 851 aaKnown RBP20.29■□□□□ 0.84
COMMD4-205ENST00000562310 NBPF8Q3BBV2 869 aa20.28■□□□□ 0.84
COMMD4-205ENST00000562310 MYOM2P54296 1465 aa20.28■□□□□ 0.84
COMMD4-205ENST00000562310 LAMC1P11047 1609 aa20.27■□□□□ 0.84
COMMD4-205ENST00000562310 MLECQ14165 292 aa20.27■□□□□ 0.84
COMMD4-205ENST00000562310 RGL3Q3MIN7 710 aa20.26■□□□□ 0.83
COMMD4-205ENST00000562310 SLC52A1Q9NWF4 448 aa20.26■□□□□ 0.83
COMMD4-205ENST00000562310 PPLO60437 1756 aa20.26■□□□□ 0.83
COMMD4-205ENST00000562310 KIAA1210Q9ULL0 1709 aa20.25■□□□□ 0.83
COMMD4-205ENST00000562310 ZNF326Q5BKZ1 582 aaKnown RBP20.22■□□□□ 0.83
COMMD4-205ENST00000562310 KDM2AQ9Y2K7 1162 aa20.22■□□□□ 0.83
COMMD4-205ENST00000562310 TMEM131LA2VDJ0 1609 aa20.22■□□□□ 0.83
COMMD4-205ENST00000562310 ZMYM3Q14202 1370 aa20.21■□□□□ 0.83
COMMD4-205ENST00000562310 RPGRIP1LQ68CZ1 1315 aa20.21■□□□□ 0.83
COMMD4-205ENST00000562310 EIF4G2P78344 907 aaKnown RBP eCLIP20.2■□□□□ 0.82
COMMD4-205ENST00000562310 MYO5BQ9ULV0 1848 aa20.2■□□□□ 0.82
COMMD4-205ENST00000562310 KDM5AP29375 1690 aaKnown RBP20.19■□□□□ 0.82
COMMD4-205ENST00000562310 NRXN1Q9ULB1 1477 aa20.19■□□□□ 0.82
COMMD4-205ENST00000562310 C3P01024 1663 aa20.19■□□□□ 0.82
COMMD4-205ENST00000562310 GPRASP1Q5JY77 1395 aa20.19■□□□□ 0.82
COMMD4-205ENST00000562310 NEXMIFQ5QGS0 1516 aa20.17■□□□□ 0.82
COMMD4-205ENST00000562310 POLR1AO95602 1720 aaPredicted RBP20.17■□□□□ 0.82
COMMD4-205ENST00000562310 ROCK2O75116 1388 aaKnown RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms