RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 STAC3Q96MF2 364 aa8.43□□□□□ -1.06
CAPN3-211ENST00000562199 TK2O00142 265 aa8.42□□□□□ -1.06
CAPN3-211ENST00000562199 SUPT5HO00267 1087 aaKnown RBP8.42□□□□□ -1.06
CAPN3-211ENST00000562199 FOSBP53539 338 aa8.42□□□□□ -1.06
CAPN3-211ENST00000562199 BBXQ8WY36 941 aaPredicted RBP8.42□□□□□ -1.06
CAPN3-211ENST00000562199 ANO8Q9HCE9 1232 aaPredicted RBP8.42□□□□□ -1.06
CAPN3-211ENST00000562199 HRO43593 1189 aa8.41□□□□□ -1.06
CAPN3-211ENST00000562199 CHMP4AQ9BY43 222 aa8.41□□□□□ -1.06
CAPN3-211ENST00000562199 BCL2L12Q9HB09 334 aa8.4□□□□□ -1.06
CAPN3-211ENST00000562199 CDK11AQ9UQ88 783 aaPredicted RBP8.4□□□□□ -1.06
CAPN3-211ENST00000562199 UBTFP17480 764 aaKnown RBP8.39□□□□□ -1.07
CAPN3-211ENST00000562199 KCTD12Q96CX2 325 aaKnown RBP8.39□□□□□ -1.07
CAPN3-211ENST00000562199 VPS9D1Q9Y2B5 631 aa8.39□□□□□ -1.07
CAPN3-211ENST00000562199 PTPREP23469 700 aa8.38□□□□□ -1.07
CAPN3-211ENST00000562199 ZDHHC16Q969W1 377 aa8.38□□□□□ -1.07
CAPN3-211ENST00000562199 ADAM33Q9BZ11 813 aa8.38□□□□□ -1.07
CAPN3-211ENST00000562199 JPH4Q96JJ6 628 aa8.37□□□□□ -1.07
CAPN3-211ENST00000562199 HCSTQ9UBK5 93 aa8.37□□□□□ -1.07
CAPN3-211ENST00000562199 CDK11BP21127 795 aaKnown RBP8.36□□□□□ -1.07
CAPN3-211ENST00000562199 PDE4CQ08493 712 aa8.36□□□□□ -1.07
CAPN3-211ENST00000562199 SPRYD3Q8NCJ5 442 aa8.36□□□□□ -1.07
CAPN3-211ENST00000562199 KDM2AQ9Y2K7 1162 aa8.36□□□□□ -1.07
CAPN3-211ENST00000562199 DPYSL4O14531 572 aa8.34□□□□□ -1.07
CAPN3-211ENST00000562199 NEFLP07196 543 aa8.34□□□□□ -1.07
CAPN3-211ENST00000562199 BRD2P25440 801 aaKnown RBP8.34□□□□□ -1.07
CAPN3-211ENST00000562199 CFAP44Q96MT7 982 aa8.34□□□□□ -1.07
CAPN3-211ENST00000562199 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.34□□□□□ -1.07
CAPN3-211ENST00000562199 PCDHGA10Q9Y5H3 936 aa8.34□□□□□ -1.07
CAPN3-211ENST00000562199 ZBED2Q9BTP6 218 aa8.33□□□□□ -1.08
CAPN3-211ENST00000562199 SHROOM4Q9ULL8 1493 aa8.32□□□□□ -1.08
CAPN3-211ENST00000562199 PTPN5P54829 565 aa8.32□□□□□ -1.08
CAPN3-211ENST00000562199 TAF7LQ5H9L4 462 aa8.32□□□□□ -1.08
CAPN3-211ENST00000562199 PAXIP1Q6ZW49 1069 aaPredicted RBP8.32□□□□□ -1.08
CAPN3-211ENST00000562199 PLA2G2EQ9NZK7 142 aa8.32□□□□□ -1.08
CAPN3-211ENST00000562199 CAMK2BQ13554 666 aa8.31□□□□□ -1.08
CAPN3-211ENST00000562199 SLC4A5Q9BY07 1137 aa8.31□□□□□ -1.08
CAPN3-211ENST00000562199 GOLGA8CPA6NN73 597 aa8.3□□□□□ -1.08
CAPN3-211ENST00000562199 HMGB1P09429 215 aaKnown RBP8.3□□□□□ -1.08
CAPN3-211ENST00000562199 BHMG1C9JSJ3 638 aaPredicted RBP8.29□□□□□ -1.08
CAPN3-211ENST00000562199 COL9A1P20849 921 aa8.29□□□□□ -1.08
CAPN3-211ENST00000562199 TYW1BQ6NUM6 668 aa8.29□□□□□ -1.08
CAPN3-211ENST00000562199 MRPL50Q8N5N7 158 aaKnown RBP8.29□□□□□ -1.08
CAPN3-211ENST00000562199 PHF14O94880 888 aa8.28□□□□□ -1.08
CAPN3-211ENST00000562199 PROX2Q3B8N5 592 aa8.28□□□□□ -1.08
CAPN3-211ENST00000562199 DDX12PQ92771 950 aa8.28□□□□□ -1.08
CAPN3-211ENST00000562199 RBM33Q96EV2 1170 aaKnown RBP8.28□□□□□ -1.08
CAPN3-211ENST00000562199 WNT2BQ93097 391 aa8.27□□□□□ -1.09
CAPN3-211ENST00000562199 PPP1R3GB7ZBB8 358 aa8.26□□□□□ -1.09
CAPN3-211ENST00000562199 FBXW7Q969H0 707 aa8.26□□□□□ -1.09
CAPN3-211ENST00000562199 HSP90B1P14625 803 aaKnown RBP8.25□□□□□ -1.09
CAPN3-211ENST00000562199 PKNOX2Q96KN3 472 aa8.25□□□□□ -1.09
CAPN3-211ENST00000562199 C6orf132Q5T0Z8 1188 aa8.24□□□□□ -1.09
CAPN3-211ENST00000562199 NBPF3Q9H094 633 aa8.24□□□□□ -1.09
CAPN3-211ENST00000562199 THSD4Q6ZMP0 1018 aa8.23□□□□□ -1.09
CAPN3-211ENST00000562199 EPAS1Q99814 870 aa8.23□□□□□ -1.09
CAPN3-211ENST00000562199 WDR70Q9NW82 654 aa8.23□□□□□ -1.09
CAPN3-211ENST00000562199 ZCCHC6Q5VYS8 1495 aaKnown RBP8.23□□□□□ -1.09
CAPN3-211ENST00000562199 DHX37Q8IY37 1157 aaKnown RBP8.22□□□□□ -1.09
CAPN3-211ENST00000562199 KIAA1468Q9P260 1216 aa8.22□□□□□ -1.09
CAPN3-211ENST00000562199 RABGEF1Q9UJ41 708 aa8.22□□□□□ -1.09
CAPN3-211ENST00000562199 NBR1Q14596 966 aa8.21□□□□□ -1.1
CAPN3-211ENST00000562199 E2F4Q16254 413 aa8.21□□□□□ -1.1
CAPN3-211ENST00000562199 IGSF3O75054 1194 aa8.2□□□□□ -1.1
CAPN3-211ENST00000562199 CCDC180Q9P1Z9 1646 aa8.2□□□□□ -1.1
CAPN3-211ENST00000562199 GRXCR2A6NFK2 248 aa8.18□□□□□ -1.1
CAPN3-211ENST00000562199 MAP3K7O43318 606 aa8.18□□□□□ -1.1
CAPN3-211ENST00000562199 PDIA6Q15084 440 aa8.18□□□□□ -1.1
CAPN3-211ENST00000562199 TSR1Q2NL82 804 aaKnown RBP8.18□□□□□ -1.1
CAPN3-211ENST00000562199 SEPT9Q9UHD8 586 aaPredicted RBP8.18□□□□□ -1.1
CAPN3-211ENST00000562199 CCDC9Q9Y3X0 531 aaKnown RBP8.18□□□□□ -1.1
CAPN3-211ENST00000562199 BCAMP50895 628 aa8.17□□□□□ -1.1
CAPN3-211ENST00000562199 ANKK1Q8NFD2 765 aa8.17□□□□□ -1.1
CAPN3-211ENST00000562199 SPDYE16A6NNV3 312 aaPredicted RBP8.16□□□□□ -1.1
CAPN3-211ENST00000562199 EN1Q05925 392 aaPredicted RBP8.16□□□□□ -1.1
CAPN3-211ENST00000562199 TRIM6-TRIM34B2RNG4 842 aa8.15□□□□□ -1.1
CAPN3-211ENST00000562199 ZFRQ96KR1 1074 aaKnown RBP8.15□□□□□ -1.1
CAPN3-211ENST00000562199 PUS7Q96PZ0 661 aaKnown RBP8.15□□□□□ -1.1
CAPN3-211ENST00000562199 ONECUT3O60422 494 aaPredicted RBP8.13□□□□□ -1.11
CAPN3-211ENST00000562199 PRIM1P49642 420 aaKnown RBP8.13□□□□□ -1.11
CAPN3-211ENST00000562199 LAPTM4BQ86VI4 370 aa8.13□□□□□ -1.11
CAPN3-211ENST00000562199 TSHZ2Q9NRE2 1034 aa8.12□□□□□ -1.11
CAPN3-211ENST00000562199 TSKSQ9UJT2 592 aa8.12□□□□□ -1.11
CAPN3-211ENST00000562199 SOWAHBA6NEL2 793 aa8.11□□□□□ -1.11
CAPN3-211ENST00000562199 FGD1P98174 961 aa8.11□□□□□ -1.11
CAPN3-211ENST00000562199 PACS2Q86VP3 889 aa8.11□□□□□ -1.11
CAPN3-211ENST00000562199 MYO15BQ96JP2 1530 aa8.11□□□□□ -1.11
CAPN3-211ENST00000562199 SMAPO00193 183 aa8.1□□□□□ -1.11
CAPN3-211ENST00000562199 WBP1LQ9NX94 342 aa8.1□□□□□ -1.11
CAPN3-211ENST00000562199 FAM98CQ17RN3 349 aaKnown RBP8.09□□□□□ -1.11
CAPN3-211ENST00000562199 CDCA7LQ96GN5 454 aa8.09□□□□□ -1.11
CAPN3-211ENST00000562199 BCCIPQ9P287 314 aaKnown RBP eCLIP8.09□□□□□ -1.11
CAPN3-211ENST00000562199 ARIH1Q9Y4X5 557 aaPredicted RBP8.09□□□□□ -1.11
CAPN3-211ENST00000562199 CENPBP07199 599 aaPredicted RBP8.08□□□□□ -1.12
CAPN3-211ENST00000562199 OSBPP22059 807 aa8.08□□□□□ -1.12
CAPN3-211ENST00000562199 CDHR5Q9HBB8 845 aa8.08□□□□□ -1.12
CAPN3-211ENST00000562199 PRSS12P56730 875 aa8.07□□□□□ -1.12
CAPN3-211ENST00000562199 LRCH3Q96II8 777 aa8.07□□□□□ -1.12
CAPN3-211ENST00000562199 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.07□□□□□ -1.12
CAPN3-211ENST00000562199 FAM198AQ9UFP1 575 aa8.07□□□□□ -1.12
CAPN3-211ENST00000562199 HPS5Q9UPZ3 1129 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms