RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 ATAD2BQ9ULI0 1458 aa11.08□□□□□ -0.64
UBR1-203ENST00000562173 SEMA3EO15041 775 aa11.08□□□□□ -0.64
UBR1-203ENST00000562173 EVI5O60447 810 aa11.07□□□□□ -0.64
UBR1-203ENST00000562173 PTGER2P43116 358 aa11.07□□□□□ -0.64
UBR1-203ENST00000562173 NCAPD3P42695 1498 aa11.06□□□□□ -0.64
UBR1-203ENST00000562173 ANO8Q9HCE9 1232 aaPredicted RBP11.05□□□□□ -0.64
UBR1-203ENST00000562173 SMARCA4P51532 1647 aa11.05□□□□□ -0.64
UBR1-203ENST00000562173 PSDA5PKW4 1024 aaPredicted RBP11.03□□□□□ -0.64
UBR1-203ENST00000562173 AXIN2Q9Y2T1 843 aa11.03□□□□□ -0.64
UBR1-203ENST00000562173 PBX2P40425 430 aa11.02□□□□□ -0.65
UBR1-203ENST00000562173 LSM11P83369 360 aaKnown RBP eCLIP11.02□□□□□ -0.65
UBR1-203ENST00000562173 JPH4Q96JJ6 628 aa10.99□□□□□ -0.65
UBR1-203ENST00000562173 MLLT3P42568 568 aaPredicted RBP10.98□□□□□ -0.65
UBR1-203ENST00000562173 LMOD2Q6P5Q4 547 aa10.98□□□□□ -0.65
UBR1-203ENST00000562173 ANKRD13DQ6ZTN6 518 aa10.98□□□□□ -0.65
UBR1-203ENST00000562173 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.98□□□□□ -0.65
UBR1-203ENST00000562173 PHF14O94880 888 aa10.97□□□□□ -0.65
UBR1-203ENST00000562173 PPP4R3BQ5MIZ7 849 aa10.97□□□□□ -0.65
UBR1-203ENST00000562173 EPAS1Q99814 870 aa10.97□□□□□ -0.65
UBR1-203ENST00000562173 HMGXB3Q12766 1538 aa10.97□□□□□ -0.65
UBR1-203ENST00000562173 ARHGAP33O14559 1287 aa10.96□□□□□ -0.65
UBR1-203ENST00000562173 PSEN2P49810 448 aa10.94□□□□□ -0.66
UBR1-203ENST00000562173 FOSBP53539 338 aa10.94□□□□□ -0.66
UBR1-203ENST00000562173 ZNF454Q8N9F8 522 aa10.94□□□□□ -0.66
UBR1-203ENST00000562173 FBXW7Q969H0 707 aa10.94□□□□□ -0.66
UBR1-203ENST00000562173 DMRTA1Q5VZB9 504 aa10.93□□□□□ -0.66
UBR1-203ENST00000562173 DDX12PQ92771 950 aa10.93□□□□□ -0.66
UBR1-203ENST00000562173 MYT1LQ9UL68 1186 aa10.93□□□□□ -0.66
UBR1-203ENST00000562173 BAZ1BQ9UIG0 1483 aaKnown RBP10.93□□□□□ -0.66
UBR1-203ENST00000562173 GRXCR2A6NFK2 248 aa10.92□□□□□ -0.66
UBR1-203ENST00000562173 TYW1BQ6NUM6 668 aa10.92□□□□□ -0.66
UBR1-203ENST00000562173 OSBPP22059 807 aa10.91□□□□□ -0.66
UBR1-203ENST00000562173 RNF166Q96A37 237 aaPredicted RBP10.91□□□□□ -0.66
UBR1-203ENST00000562173 MROH2BQ7Z745 1585 aa10.9□□□□□ -0.66
UBR1-203ENST00000562173 BAZ1AQ9NRL2 1556 aaPredicted RBP10.9□□□□□ -0.66
UBR1-203ENST00000562173 EN1Q05925 392 aaPredicted RBP10.9□□□□□ -0.66
UBR1-203ENST00000562173 PCDHGA10Q9Y5H3 936 aa10.9□□□□□ -0.66
UBR1-203ENST00000562173 LAMC3Q9Y6N6 1575 aa10.89□□□□□ -0.67
UBR1-203ENST00000562173 ADGRD1Q6QNK2 874 aa10.88□□□□□ -0.67
UBR1-203ENST00000562173 GPIHBP1Q8IV16 184 aa10.88□□□□□ -0.67
UBR1-203ENST00000562173 KCNK17Q96T54 332 aa10.88□□□□□ -0.67
UBR1-203ENST00000562173 BCL2L12Q9HB09 334 aa10.88□□□□□ -0.67
UBR1-203ENST00000562173 TK2O00142 265 aa10.86□□□□□ -0.67
UBR1-203ENST00000562173 ZDHHC16Q969W1 377 aa10.86□□□□□ -0.67
UBR1-203ENST00000562173 RBM26Q5T8P6 1007 aaKnown RBP10.85□□□□□ -0.67
UBR1-203ENST00000562173 ADAM33Q9BZ11 813 aa10.85□□□□□ -0.67
UBR1-203ENST00000562173 HRO43593 1189 aa10.84□□□□□ -0.67
UBR1-203ENST00000562173 WIZO95785 1651 aa10.83□□□□□ -0.68
UBR1-203ENST00000562173 MAP3K7O43318 606 aa10.83□□□□□ -0.68
UBR1-203ENST00000562173 TPRNQ4KMQ1 711 aa10.83□□□□□ -0.68
UBR1-203ENST00000562173 WDR62O43379 1518 aa10.83□□□□□ -0.68
UBR1-203ENST00000562173 RIMBP3CA6NJZ7 1639 aa10.82□□□□□ -0.68
UBR1-203ENST00000562173 RIMBP3BA6NNM3 1639 aa10.82□□□□□ -0.68
UBR1-203ENST00000562173 RIMBP3Q9UFD9 1639 aa10.82□□□□□ -0.68
UBR1-203ENST00000562173 PEG3Q9GZU2 1588 aa10.82□□□□□ -0.68
UBR1-203ENST00000562173 MRC2Q9UBG0 1479 aa10.81□□□□□ -0.68
UBR1-203ENST00000562173 GPR37O15354 613 aa10.81□□□□□ -0.68
UBR1-203ENST00000562173 CERKQ8TCT0 537 aa10.81□□□□□ -0.68
UBR1-203ENST00000562173 ZC3H15Q8WU90 426 aaKnown RBP10.81□□□□□ -0.68
UBR1-203ENST00000562173 FCHSD2O94868 740 aa10.8□□□□□ -0.68
UBR1-203ENST00000562173 PTPREP23469 700 aa10.8□□□□□ -0.68
UBR1-203ENST00000562173 PRIM1P49642 420 aaKnown RBP10.8□□□□□ -0.68
UBR1-203ENST00000562173 KCNH8Q96L42 1107 aa10.8□□□□□ -0.68
UBR1-203ENST00000562173 NUTM2FA1L443 756 aa10.79□□□□□ -0.68
UBR1-203ENST00000562173 HIC1Q14526 733 aa10.79□□□□□ -0.68
UBR1-203ENST00000562173 VPS9D1Q9Y2B5 631 aa10.79□□□□□ -0.68
UBR1-203ENST00000562173 ZBED2Q9BTP6 218 aa10.78□□□□□ -0.68
UBR1-203ENST00000562173 SLC4A5Q9BY07 1137 aa10.78□□□□□ -0.68
UBR1-203ENST00000562173 PTGDRQ13258 359 aa10.77□□□□□ -0.69
UBR1-203ENST00000562173 RBM33Q96EV2 1170 aaKnown RBP10.77□□□□□ -0.69
UBR1-203ENST00000562173 RBM27Q9P2N5 1060 aaKnown RBP10.77□□□□□ -0.69
UBR1-203ENST00000562173 ZMYND10O75800 440 aa10.76□□□□□ -0.69
UBR1-203ENST00000562173 C6orf132Q5T0Z8 1188 aa10.76□□□□□ -0.69
UBR1-203ENST00000562173 PDS5BQ9NTI5 1447 aa10.75□□□□□ -0.69
UBR1-203ENST00000562173 PPP1R3GB7ZBB8 358 aa10.74□□□□□ -0.69
UBR1-203ENST00000562173 GNPATO15228 680 aa10.74□□□□□ -0.69
UBR1-203ENST00000562173 TSR1Q2NL82 804 aaKnown RBP10.74□□□□□ -0.69
UBR1-203ENST00000562173 BARGINQ6ZT62 677 aa10.74□□□□□ -0.69
UBR1-203ENST00000562173 CDHR5Q9HBB8 845 aa10.74□□□□□ -0.69
UBR1-203ENST00000562173 COL9A1P20849 921 aa10.73□□□□□ -0.69
UBR1-203ENST00000562173 CADPSQ9ULU8 1353 aa10.73□□□□□ -0.69
UBR1-203ENST00000562173 URB2Q14146 1524 aaKnown RBP10.73□□□□□ -0.69
UBR1-203ENST00000562173 BHMG1C9JSJ3 638 aaPredicted RBP10.72□□□□□ -0.69
UBR1-203ENST00000562173 NPDC1Q9NQX5 325 aaPredicted RBP10.71□□□□□ -0.69
UBR1-203ENST00000562173 MAP2K5Q13163 448 aa10.7□□□□□ -0.7
UBR1-203ENST00000562173 ZNF608Q9ULD9 1512 aaPredicted RBP10.69□□□□□ -0.7
UBR1-203ENST00000562173 FANCD2Q9BXW9 1451 aa10.68□□□□□ -0.7
UBR1-203ENST00000562173 CEP164Q9UPV0 1460 aa10.68□□□□□ -0.7
UBR1-203ENST00000562173 PROX2Q3B8N5 592 aa10.68□□□□□ -0.7
UBR1-203ENST00000562173 MINK1Q8N4C8 1332 aaPredicted RBP10.67□□□□□ -0.7
UBR1-203ENST00000562173 PRKCSHP14314 528 aaPredicted RBP10.67□□□□□ -0.7
UBR1-203ENST00000562173 ARHGEF11O15085 1522 aa10.67□□□□□ -0.7
UBR1-203ENST00000562173 KCTD12Q96CX2 325 aaKnown RBP10.66□□□□□ -0.7
UBR1-203ENST00000562173 CHD1O14646 1710 aa10.65□□□□□ -0.7
UBR1-203ENST00000562173 PRSS12P56730 875 aa10.65□□□□□ -0.7
UBR1-203ENST00000562173 TTC13Q8NBP0 860 aa10.65□□□□□ -0.7
UBR1-203ENST00000562173 STAC3Q96MF2 364 aa10.65□□□□□ -0.7
UBR1-203ENST00000562173 ONECUT3O60422 494 aaPredicted RBP10.64□□□□□ -0.71
UBR1-203ENST00000562173 HCSTQ9UBK5 93 aa10.64□□□□□ -0.71
UBR1-203ENST00000562173 PADI6Q6TGC4 694 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms