RNA–Protein interactions for RNA: ENST00000562053.1

TUBGCP4-203, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-203ENST00000562053 KDM5DQ9BY66 1539 aa10.99□□□□□ -0.65
TUBGCP4-203ENST00000562053 GCC2Q8IWJ2 1684 aa10.98□□□□□ -0.65
TUBGCP4-203ENST00000562053 TSPY4P0CV99 314 aa10.98□□□□□ -0.65
TUBGCP4-203ENST00000562053 TSPY10P0CW01 314 aa10.98□□□□□ -0.65
TUBGCP4-203ENST00000562053 PPARGC1BQ86YN6 1023 aaKnown RBP10.98□□□□□ -0.65
TUBGCP4-203ENST00000562053 PTPRKQ15262 1439 aa10.98□□□□□ -0.65
TUBGCP4-203ENST00000562053 NCOA1Q15788 1441 aa10.97□□□□□ -0.65
TUBGCP4-203ENST00000562053 CNTLNQ9NXG0 1405 aa10.97□□□□□ -0.65
TUBGCP4-203ENST00000562053 CEP152O94986 1710 aa10.96□□□□□ -0.65
TUBGCP4-203ENST00000562053 ANKRD30AQ9BXX3 1397 aa10.96□□□□□ -0.65
TUBGCP4-203ENST00000562053 FAM50AQ14320 339 aaKnown RBP10.96□□□□□ -0.65
TUBGCP4-203ENST00000562053 PREX1Q8TCU6 1659 aa10.95□□□□□ -0.66
TUBGCP4-203ENST00000562053 UNC13BO14795 1591 aa10.95□□□□□ -0.66
TUBGCP4-203ENST00000562053 ROCK1Q13464 1354 aa10.95□□□□□ -0.66
TUBGCP4-203ENST00000562053 CAMSAP1Q5T5Y3 1602 aa10.95□□□□□ -0.66
TUBGCP4-203ENST00000562053 VWDEQ8N2E2 1590 aa10.94□□□□□ -0.66
TUBGCP4-203ENST00000562053 ABCC3O15438 1527 aa10.94□□□□□ -0.66
TUBGCP4-203ENST00000562053 MLECQ14165 292 aa10.93□□□□□ -0.66
TUBGCP4-203ENST00000562053 ZNF142P52746 1687 aaPredicted RBP10.92□□□□□ -0.66
TUBGCP4-203ENST00000562053 MYO3AQ8NEV4 1616 aa10.92□□□□□ -0.66
TUBGCP4-203ENST00000562053 ANKRD50Q9ULJ7 1429 aa10.92□□□□□ -0.66
TUBGCP4-203ENST00000562053 LMTK3Q96Q04 1460 aa10.91□□□□□ -0.66
TUBGCP4-203ENST00000562053 LMTK2Q8IWU2 1503 aa10.9□□□□□ -0.66
TUBGCP4-203ENST00000562053 PZPP20742 1482 aa10.9□□□□□ -0.66
TUBGCP4-203ENST00000562053 NPATQ14207 1427 aa10.9□□□□□ -0.66
TUBGCP4-203ENST00000562053 EFCAB6Q5THR3 1501 aa10.89□□□□□ -0.67
TUBGCP4-203ENST00000562053 IQGAP3Q86VI3 1631 aa10.89□□□□□ -0.67
TUBGCP4-203ENST00000562053 KIF3BO15066 747 aa10.89□□□□□ -0.67
TUBGCP4-203ENST00000562053 CHIC2Q9UKJ5 165 aa10.89□□□□□ -0.67
TUBGCP4-203ENST00000562053 TET3O43151 1660 aa10.89□□□□□ -0.67
TUBGCP4-203ENST00000562053 HFM1A2PYH4 1435 aa10.88□□□□□ -0.67
TUBGCP4-203ENST00000562053 PIAS4Q8N2W9 510 aaPredicted RBP10.88□□□□□ -0.67
TUBGCP4-203ENST00000562053 RRP7BPQ9NSQ0 103 aa10.88□□□□□ -0.67
TUBGCP4-203ENST00000562053 SPATA31D1Q6ZQQ2 1576 aa10.87□□□□□ -0.67
TUBGCP4-203ENST00000562053 GGT6Q6P531 493 aa10.87□□□□□ -0.67
TUBGCP4-203ENST00000562053 NAIPQ13075 1403 aa10.86□□□□□ -0.67
TUBGCP4-203ENST00000562053 SETD1BQ9UPS6 1966 aaKnown RBP10.86□□□□□ -0.67
TUBGCP4-203ENST00000562053 ZMYM3Q14202 1370 aa10.86□□□□□ -0.67
TUBGCP4-203ENST00000562053 CEP170BQ9Y4F5 1589 aaPredicted RBP10.86□□□□□ -0.67
TUBGCP4-203ENST00000562053 ARHGAP31Q2M1Z3 1444 aa10.85□□□□□ -0.67
TUBGCP4-203ENST00000562053 ESF1Q9H501 851 aaKnown RBP10.85□□□□□ -0.67
TUBGCP4-203ENST00000562053 ERVK-7P63135 1459 aa10.85□□□□□ -0.67
TUBGCP4-203ENST00000562053 UHRF1BP1Q6BDS2 1440 aa10.84□□□□□ -0.67
TUBGCP4-203ENST00000562053 E9PCH4 1651 aa10.83□□□□□ -0.68
TUBGCP4-203ENST00000562053 KANK1Q14678 1352 aa10.83□□□□□ -0.68
TUBGCP4-203ENST00000562053 ITGAEP38570 1179 aa10.83□□□□□ -0.68
TUBGCP4-203ENST00000562053 WASHC2CQ9Y4E1 1318 aa10.83□□□□□ -0.68
TUBGCP4-203ENST00000562053 RPRD2Q5VT52 1461 aaKnown RBP10.82□□□□□ -0.68
TUBGCP4-203ENST00000562053 CEBPAP49715 358 aaPredicted RBP10.82□□□□□ -0.68
TUBGCP4-203ENST00000562053 SYNMO15061 1565 aa10.82□□□□□ -0.68
TUBGCP4-203ENST00000562053 NLRP1Q9C000 1473 aa10.81□□□□□ -0.68
TUBGCP4-203ENST00000562053 KDM5AP29375 1690 aaKnown RBP10.8□□□□□ -0.68
TUBGCP4-203ENST00000562053 A2ML1A8K2U0 1454 aa10.8□□□□□ -0.68
TUBGCP4-203ENST00000562053 TNRQ92752 1358 aa10.79□□□□□ -0.68
TUBGCP4-203ENST00000562053 SPHKAPQ2M3C7 1700 aa10.79□□□□□ -0.68
TUBGCP4-203ENST00000562053 PIK3C2BO00750 1634 aa10.79□□□□□ -0.68
TUBGCP4-203ENST00000562053 POLR1AO95602 1720 aaPredicted RBP10.78□□□□□ -0.68
TUBGCP4-203ENST00000562053 UBR1Q8IWV7 1749 aa10.78□□□□□ -0.68
TUBGCP4-203ENST00000562053 NOS1P29475 1434 aa10.78□□□□□ -0.68
TUBGCP4-203ENST00000562053 CFAP65Q6ZU64 1925 aaKnown RBP10.78□□□□□ -0.68
TUBGCP4-203ENST00000562053 STRCQ7RTU9 1775 aa10.77□□□□□ -0.68
TUBGCP4-203ENST00000562053 PLA2R1Q13018 1463 aa10.77□□□□□ -0.69
TUBGCP4-203ENST00000562053 ADGRB3O60242 1522 aa10.76□□□□□ -0.69
TUBGCP4-203ENST00000562053 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.76□□□□□ -0.69
TUBGCP4-203ENST00000562053 UGGT1Q9NYU2 1555 aa10.76□□□□□ -0.69
TUBGCP4-203ENST00000562053 NUP155O75694 1391 aa10.75□□□□□ -0.69
TUBGCP4-203ENST00000562053 TRPM2O94759 1503 aa10.74□□□□□ -0.69
TUBGCP4-203ENST00000562053 FBXO31Q5XUX0 539 aaPredicted RBP10.74□□□□□ -0.69
TUBGCP4-203ENST00000562053 NEURL4Q96JN8 1562 aa10.73□□□□□ -0.69
TUBGCP4-203ENST00000562053 MYO5BQ9ULV0 1848 aa10.72□□□□□ -0.69
TUBGCP4-203ENST00000562053 SETD5Q9C0A6 1442 aa10.72□□□□□ -0.69
TUBGCP4-203ENST00000562053 TMEM131LA2VDJ0 1609 aa10.71□□□□□ -0.69
TUBGCP4-203ENST00000562053 SLIT1O75093 1534 aa10.71□□□□□ -0.69
TUBGCP4-203ENST00000562053 CLTCL1P53675 1640 aa10.71□□□□□ -0.69
TUBGCP4-203ENST00000562053 HSPA2P54652 639 aa10.71□□□□□ -0.69
TUBGCP4-203ENST00000562053 RAB3GAP2Q9H2M9 1393 aa10.71□□□□□ -0.69
TUBGCP4-203ENST00000562053 ARHGAP23Q9P227 1491 aa10.7□□□□□ -0.7
TUBGCP4-203ENST00000562053 PTPRTO14522 1441 aa10.7□□□□□ -0.7
TUBGCP4-203ENST00000562053 IQGAP1P46940 1657 aa10.69□□□□□ -0.7
TUBGCP4-203ENST00000562053 KIF1BO60333 1816 aa10.67□□□□□ -0.7
TUBGCP4-203ENST00000562053 MED14O60244 1454 aa10.67□□□□□ -0.7
TUBGCP4-203ENST00000562053 SCAF11Q99590 1463 aaKnown RBP10.66□□□□□ -0.7
TUBGCP4-203ENST00000562053 ACIN1Q9UKV3 1341 aaKnown RBP10.65□□□□□ -0.7
TUBGCP4-203ENST00000562053 ZFYVE9O95405 1425 aa10.65□□□□□ -0.7
TUBGCP4-203ENST00000562053 SLC52A1Q9NWF4 448 aa10.64□□□□□ -0.71
TUBGCP4-203ENST00000562053 TMEM2Q9UHN6 1383 aa10.64□□□□□ -0.71
TUBGCP4-203ENST00000562053 TRIM52Q96A61 297 aa10.63□□□□□ -0.71
TUBGCP4-203ENST00000562053 IFT172Q9UG01 1749 aa10.63□□□□□ -0.71
TUBGCP4-203ENST00000562053 PKD2Q13563 968 aa10.62□□□□□ -0.71
TUBGCP4-203ENST00000562053 IDI1Q13907 227 aa10.62□□□□□ -0.71
TUBGCP4-203ENST00000562053 SLC4A1APQ9BWU0 796 aaKnown RBP10.62□□□□□ -0.71
TUBGCP4-203ENST00000562053 NEXMIFQ5QGS0 1516 aa10.62□□□□□ -0.71
TUBGCP4-203ENST00000562053 NPHP4O75161 1426 aaPredicted RBP10.61□□□□□ -0.71
TUBGCP4-203ENST00000562053 THEMISQ8N1K5 641 aaPredicted RBP10.61□□□□□ -0.71
TUBGCP4-203ENST00000562053 PPLO60437 1756 aa10.61□□□□□ -0.71
TUBGCP4-203ENST00000562053 LTBP4Q8N2S1 1624 aa10.6□□□□□ -0.71
TUBGCP4-203ENST00000562053 NRXN3Q9Y4C0 1643 aa10.6□□□□□ -0.71
TUBGCP4-203ENST00000562053 HRCP23327 699 aa10.6□□□□□ -0.71
TUBGCP4-203ENST00000562053 DIP2AQ14689 1571 aa10.6□□□□□ -0.71
TUBGCP4-203ENST00000562053 CCDC144AA2RUR9 1427 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms