RNA–Protein interactions for RNA: ENST00000561914.5

BBS4-203, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 5

Gene BBS4, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-203ENST00000561914 PROM2Q8N271 834 aa11.36□□□□□ -0.59
BBS4-203ENST00000561914 ABCA6Q8N139 1617 aa11.35□□□□□ -0.59
BBS4-203ENST00000561914 GGT6Q6P531 493 aa11.35□□□□□ -0.59
BBS4-203ENST00000561914 ZNF777Q9ULD5 760 aaPredicted RBP11.35□□□□□ -0.59
BBS4-203ENST00000561914 PLA2R1Q13018 1463 aa11.35□□□□□ -0.59
BBS4-203ENST00000561914 TCOF1Q13428 1488 aaKnown RBP11.34□□□□□ -0.59
BBS4-203ENST00000561914 FMN1Q68DA7 1419 aa11.34□□□□□ -0.59
BBS4-203ENST00000561914 SPAG9O60271 1321 aaKnown RBP11.34□□□□□ -0.59
BBS4-203ENST00000561914 UBTFP17480 764 aaKnown RBP11.33□□□□□ -0.6
BBS4-203ENST00000561914 KIF14Q15058 1648 aa11.33□□□□□ -0.6
BBS4-203ENST00000561914 PTPRKQ15262 1439 aa11.32□□□□□ -0.6
BBS4-203ENST00000561914 EEA1Q15075 1411 aa11.31□□□□□ -0.6
BBS4-203ENST00000561914 HNRNPMP52272 730 aaKnown RBP eCLIP11.3□□□□□ -0.6
BBS4-203ENST00000561914 SHANK2Q9UPX8 1470 aa11.3□□□□□ -0.6
BBS4-203ENST00000561914 ANKLE2Q86XL3 938 aa11.29□□□□□ -0.6
BBS4-203ENST00000561914 CPS1P31327 1500 aa11.29□□□□□ -0.6
BBS4-203ENST00000561914 CEP170BQ9Y4F5 1589 aaPredicted RBP11.28□□□□□ -0.6
BBS4-203ENST00000561914 RGS17Q9UGC6 210 aaPredicted RBP11.28□□□□□ -0.6
BBS4-203ENST00000561914 ABCC1P33527 1531 aa11.27□□□□□ -0.61
BBS4-203ENST00000561914 MROH2AA6NES4 1674 aa11.27□□□□□ -0.61
BBS4-203ENST00000561914 A2ML1A8K2U0 1454 aa11.26□□□□□ -0.61
BBS4-203ENST00000561914 KIDINS220Q9ULH0 1771 aa11.26□□□□□ -0.61
BBS4-203ENST00000561914 FBXO31Q5XUX0 539 aaPredicted RBP11.26□□□□□ -0.61
BBS4-203ENST00000561914 REM2Q8IYK8 340 aaPredicted RBP11.26□□□□□ -0.61
BBS4-203ENST00000561914 MYO3AQ8NEV4 1616 aa11.25□□□□□ -0.61
BBS4-203ENST00000561914 THEMISQ8N1K5 641 aaPredicted RBP11.25□□□□□ -0.61
BBS4-203ENST00000561914 CDC42BPBQ9Y5S2 1711 aa11.24□□□□□ -0.61
BBS4-203ENST00000561914 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.24□□□□□ -0.61
BBS4-203ENST00000561914 A2MP01023 1474 aa11.24□□□□□ -0.61
BBS4-203ENST00000561914 ARHGAP35Q9NRY4 1499 aa11.24□□□□□ -0.61
BBS4-203ENST00000561914 SAMD9LQ8IVG5 1584 aa11.24□□□□□ -0.61
BBS4-203ENST00000561914 CLTCQ00610 1675 aaKnown RBP11.24□□□□□ -0.61
BBS4-203ENST00000561914 CFDP1Q9UEE9 299 aaPredicted RBP11.23□□□□□ -0.61
BBS4-203ENST00000561914 TNRQ92752 1358 aa11.23□□□□□ -0.61
BBS4-203ENST00000561914 ZNF142P52746 1687 aaPredicted RBP11.23□□□□□ -0.61
BBS4-203ENST00000561914 SUPT6HQ7KZ85 1726 aaKnown RBP11.23□□□□□ -0.61
BBS4-203ENST00000561914 ITSN2Q9NZM3 1697 aa11.22□□□□□ -0.61
BBS4-203ENST00000561914 DNMT1P26358 1616 aaKnown RBP11.21□□□□□ -0.61
BBS4-203ENST00000561914 PREX2Q70Z35 1606 aa11.21□□□□□ -0.61
BBS4-203ENST00000561914 POTEAQ6S8J7 498 aa11.21□□□□□ -0.61
BBS4-203ENST00000561914 SRCAPQ6ZRS2 3230 aa11.2□□□□□ -0.62
BBS4-203ENST00000561914 NPHP4O75161 1426 aaPredicted RBP11.2□□□□□ -0.62
BBS4-203ENST00000561914 SPDYE1Q8NFV5 336 aaPredicted RBP11.2□□□□□ -0.62
BBS4-203ENST00000561914 FBXO3Q9UK99 471 aa11.2□□□□□ -0.62
BBS4-203ENST00000561914 WASHC2CQ9Y4E1 1318 aa11.19□□□□□ -0.62
BBS4-203ENST00000561914 KIF3BO15066 747 aa11.19□□□□□ -0.62
BBS4-203ENST00000561914 STAG3Q9UJ98 1225 aa11.19□□□□□ -0.62
BBS4-203ENST00000561914 ATP7AQ04656 1500 aa11.19□□□□□ -0.62
BBS4-203ENST00000561914 SYCP2Q9BX26 1530 aa11.19□□□□□ -0.62
BBS4-203ENST00000561914 KIAA1107Q9UPP5 1409 aa11.18□□□□□ -0.62
BBS4-203ENST00000561914 ALKQ9UM73 1620 aa11.18□□□□□ -0.62
BBS4-203ENST00000561914 VWDEQ8N2E2 1590 aa11.18□□□□□ -0.62
BBS4-203ENST00000561914 NEURL4Q96JN8 1562 aa11.18□□□□□ -0.62
BBS4-203ENST00000561914 GPATCH8Q9UKJ3 1502 aaKnown RBP11.18□□□□□ -0.62
BBS4-203ENST00000561914 PLEKHH2Q8IVE3 1493 aa11.17□□□□□ -0.62
BBS4-203ENST00000561914 PLXNC1O60486 1568 aa11.16□□□□□ -0.62
BBS4-203ENST00000561914 LRRC7Q96NW7 1537 aa11.16□□□□□ -0.62
BBS4-203ENST00000561914 CCDC18Q5T9S5 1454 aa11.16□□□□□ -0.62
BBS4-203ENST00000561914 CASKIN1Q8WXD9 1431 aa11.16□□□□□ -0.62
BBS4-203ENST00000561914 MIA2Q96PC5 1412 aa11.16□□□□□ -0.62
BBS4-203ENST00000561914 CCNB3Q8WWL7 1395 aa11.16□□□□□ -0.62
BBS4-203ENST00000561914 FAM135AQ9P2D6 1515 aa11.15□□□□□ -0.62
BBS4-203ENST00000561914 DHX29Q7Z478 1369 aaKnown RBP11.15□□□□□ -0.63
BBS4-203ENST00000561914 ZNF644Q9H582 1327 aaPredicted RBP11.14□□□□□ -0.63
BBS4-203ENST00000561914 MED14O60244 1454 aa11.14□□□□□ -0.63
BBS4-203ENST00000561914 CLEC11AQ9Y240 323 aa11.14□□□□□ -0.63
BBS4-203ENST00000561914 POLR1AO95602 1720 aaPredicted RBP11.13□□□□□ -0.63
BBS4-203ENST00000561914 CDC42BPAQ5VT25 1732 aa11.13□□□□□ -0.63
BBS4-203ENST00000561914 PITPNM1O00562 1244 aa11.13□□□□□ -0.63
BBS4-203ENST00000561914 PZPP20742 1482 aa11.12□□□□□ -0.63
BBS4-203ENST00000561914 NLRP1Q9C000 1473 aa11.12□□□□□ -0.63
BBS4-203ENST00000561914 UGGT1Q9NYU2 1555 aa11.12□□□□□ -0.63
BBS4-203ENST00000561914 LRRIQ1Q96JM4 1722 aa11.12□□□□□ -0.63
BBS4-203ENST00000561914 INO80Q9ULG1 1556 aaPredicted RBP11.11□□□□□ -0.63
BBS4-203ENST00000561914 FAM135BQ49AJ0 1406 aa11.09□□□□□ -0.63
BBS4-203ENST00000561914 TXNDC2Q86VQ3 553 aa11.09□□□□□ -0.63
BBS4-203ENST00000561914 DEPDC5O75140 1603 aa11.09□□□□□ -0.63
BBS4-203ENST00000561914 RNF17Q9BXT8 1623 aaKnown RBP11.09□□□□□ -0.63
BBS4-203ENST00000561914 RTEL1-TNFRSF6BF6WH68 1400 aa11.09□□□□□ -0.63
BBS4-203ENST00000561914 KDM5DQ9BY66 1539 aa11.08□□□□□ -0.64
BBS4-203ENST00000561914 UPF1Q92900 1129 aaKnown RBP eCLIP11.07□□□□□ -0.64
BBS4-203ENST00000561914 IQGAP1P46940 1657 aa11.07□□□□□ -0.64
BBS4-203ENST00000561914 MTUS2Q5JR59 1369 aa11.06□□□□□ -0.64
BBS4-203ENST00000561914 ADGBQ8N7X0 1667 aa11.06□□□□□ -0.64
BBS4-203ENST00000561914 LTKP29376 864 aa11.06□□□□□ -0.64
BBS4-203ENST00000561914 EID1Q9Y6B2 187 aa11.06□□□□□ -0.64
BBS4-203ENST00000561914 MBD5Q9P267 1494 aa11.06□□□□□ -0.64
BBS4-203ENST00000561914 STRCP1A6NGW2 1772 aa11.05□□□□□ -0.64
BBS4-203ENST00000561914 PRR29P0C7W0 189 aa11.05□□□□□ -0.64
BBS4-203ENST00000561914 POTEHQ6S545 545 aa11.05□□□□□ -0.64
BBS4-203ENST00000561914 TRIM52Q96A61 297 aa11.05□□□□□ -0.64
BBS4-203ENST00000561914 FYCO1Q9BQS8 1478 aa11.05□□□□□ -0.64
BBS4-203ENST00000561914 SYNMO15061 1565 aa11.04□□□□□ -0.64
BBS4-203ENST00000561914 VASPP50552 380 aaPredicted RBP11.04□□□□□ -0.64
BBS4-203ENST00000561914 RSPH4AQ5TD94 716 aa11.04□□□□□ -0.64
BBS4-203ENST00000561914 PROSER2Q86WR7 435 aaPredicted RBP11.04□□□□□ -0.64
BBS4-203ENST00000561914 RBM33Q96EV2 1170 aaKnown RBP11.04□□□□□ -0.64
BBS4-203ENST00000561914 TMEM94Q12767 1356 aa11.03□□□□□ -0.64
BBS4-203ENST00000561914 TSPY4P0CV99 314 aa11.03□□□□□ -0.64
BBS4-203ENST00000561914 TSPY10P0CW01 314 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms