RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 DNMT1P26358 1616 aaKnown RBP40.03■■■■■ 4
NME3-202ENST00000561637 PPP6R1Q9UPN7 881 aa40.03■■■■■ 4
NME3-202ENST00000561637 MAP3K1Q13233 1512 aa40.01■■■■□ 3.99
NME3-202ENST00000561637 A2ML1A8K2U0 1454 aa40■■■■□ 3.99
NME3-202ENST00000561637 CCDC141Q6ZP82 1450 aa39.96■■■■□ 3.99
NME3-202ENST00000561637 POLR1AO95602 1720 aaPredicted RBP39.94■■■■□ 3.98
NME3-202ENST00000561637 NEURL4Q96JN8 1562 aa39.91■■■■□ 3.98
NME3-202ENST00000561637 RTEL1-TNFRSF6BF6WH68 1400 aa39.9■■■■□ 3.98
NME3-202ENST00000561637 FBXO31Q5XUX0 539 aaPredicted RBP39.88■■■■□ 3.97
NME3-202ENST00000561637 DHX29Q7Z478 1369 aaKnown RBP39.87■■■■□ 3.97
NME3-202ENST00000561637 ARHGEF5Q12774 1597 aa39.84■■■■□ 3.97
NME3-202ENST00000561637 HSPA1LP34931 641 aa39.84■■■■□ 3.97
NME3-202ENST00000561637 SCAF1Q9H7N4 1312 aaKnown RBP39.83■■■■□ 3.97
NME3-202ENST00000561637 TNRQ92752 1358 aa39.83■■■■□ 3.97
NME3-202ENST00000561637 MYOM3Q5VTT5 1437 aa39.82■■■■□ 3.97
NME3-202ENST00000561637 PIP4K2BP78356 416 aa39.82■■■■□ 3.97
NME3-202ENST00000561637 KIF3BO15066 747 aa39.8■■■■□ 3.96
NME3-202ENST00000561637 SHANK2Q9UPX8 1470 aa39.79■■■■□ 3.96
NME3-202ENST00000561637 CPS1P31327 1500 aa39.79■■■■□ 3.96
NME3-202ENST00000561637 MED1Q15648 1581 aaPredicted RBP39.79■■■■□ 3.96
NME3-202ENST00000561637 PZPP20742 1482 aa39.78■■■■□ 3.96
NME3-202ENST00000561637 KDM5DQ9BY66 1539 aa39.76■■■■□ 3.96
NME3-202ENST00000561637 RSPH4AQ5TD94 716 aa39.74■■■■□ 3.95
NME3-202ENST00000561637 TOM1O60784 492 aa39.73■■■■□ 3.95
NME3-202ENST00000561637 MIA2Q96PC5 1412 aa39.73■■■■□ 3.95
NME3-202ENST00000561637 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP39.72■■■■□ 3.95
NME3-202ENST00000561637 VWDEQ8N2E2 1590 aa39.72■■■■□ 3.95
NME3-202ENST00000561637 APLP2Q06481 763 aa39.71■■■■□ 3.95
NME3-202ENST00000561637 TSPY4P0CV99 314 aa39.68■■■■□ 3.94
NME3-202ENST00000561637 TSPY10P0CW01 314 aa39.68■■■■□ 3.94
NME3-202ENST00000561637 FAM135AQ9P2D6 1515 aa39.68■■■■□ 3.94
NME3-202ENST00000561637 WASHC2CQ9Y4E1 1318 aa39.67■■■■□ 3.94
NME3-202ENST00000561637 ANKLE2Q86XL3 938 aa39.67■■■■□ 3.94
NME3-202ENST00000561637 ALKQ9UM73 1620 aa39.66■■■■□ 3.94
NME3-202ENST00000561637 MAST1Q9Y2H9 1570 aa39.65■■■■□ 3.94
NME3-202ENST00000561637 UGGT1Q9NYU2 1555 aa39.63■■■■□ 3.94
NME3-202ENST00000561637 THEMISQ8N1K5 641 aaPredicted RBP39.62■■■■□ 3.93
NME3-202ENST00000561637 DEPDC5O75140 1603 aa39.62■■■■□ 3.93
NME3-202ENST00000561637 NLRP1Q9C000 1473 aa39.61■■■■□ 3.93
NME3-202ENST00000561637 NPHP4O75161 1426 aaPredicted RBP39.6■■■■□ 3.93
NME3-202ENST00000561637 MED14O60244 1454 aa39.6■■■■□ 3.93
NME3-202ENST00000561637 PTPN23Q9H3S7 1636 aa39.59■■■■□ 3.93
NME3-202ENST00000561637 STRCP1A6NGW2 1772 aa39.59■■■■□ 3.93
NME3-202ENST00000561637 IQGAP1P46940 1657 aa39.56■■■■□ 3.92
NME3-202ENST00000561637 FGD6Q6ZV73 1430 aa39.54■■■■□ 3.92
NME3-202ENST00000561637 ABCC5O15440 1437 aa39.53■■■■□ 3.92
NME3-202ENST00000561637 CROCC2H7BZ55 1655 aa39.48■■■■□ 3.91
NME3-202ENST00000561637 RNF17Q9BXT8 1623 aaKnown RBP39.47■■■■□ 3.91
NME3-202ENST00000561637 CFAP65Q6ZU64 1925 aaKnown RBP39.46■■■■□ 3.91
NME3-202ENST00000561637 ABCC3O15438 1527 aa39.45■■■■□ 3.91
NME3-202ENST00000561637 LRRC7Q96NW7 1537 aa39.45■■■■□ 3.91
NME3-202ENST00000561637 DAPK1P53355 1430 aa39.44■■■■□ 3.9
NME3-202ENST00000561637 SENP3Q9H4L4 574 aaPredicted RBP39.44■■■■□ 3.9
NME3-202ENST00000561637 MROH1Q8NDA8 1641 aa39.42■■■■□ 3.9
NME3-202ENST00000561637 ZC3H13Q5T200 1668 aaKnown RBP39.41■■■■□ 3.9
NME3-202ENST00000561637 PHF23Q9BUL5 403 aaPredicted RBP39.41■■■■□ 3.9
NME3-202ENST00000561637 KIF15Q9NS87 1388 aa39.39■■■■□ 3.9
NME3-202ENST00000561637 EIF2AK4Q9P2K8 1649 aaKnown RBP39.39■■■■□ 3.9
NME3-202ENST00000561637 RRP7BPQ9NSQ0 103 aa39.38■■■■□ 3.89
NME3-202ENST00000561637 DUOX2Q9NRD8 1548 aa39.38■■■■□ 3.89
NME3-202ENST00000561637 ERVK-7P63135 1459 aa39.37■■■■□ 3.89
NME3-202ENST00000561637 SYNMO15061 1565 aa39.36■■■■□ 3.89
NME3-202ENST00000561637 CEP152O94986 1710 aa39.36■■■■□ 3.89
NME3-202ENST00000561637 UBR1Q8IWV7 1749 aa39.35■■■■□ 3.89
NME3-202ENST00000561637 CHIC2Q9UKJ5 165 aa39.34■■■■□ 3.89
NME3-202ENST00000561637 XIRP1Q702N8 1843 aaKnown RBP39.27■■■■□ 3.88
NME3-202ENST00000561637 FAM50AQ14320 339 aaKnown RBP39.26■■■■□ 3.88
NME3-202ENST00000561637 ERBINQ96RT1 1412 aa39.23■■■■□ 3.87
NME3-202ENST00000561637 SCAF11Q99590 1463 aaKnown RBP39.23■■■■□ 3.87
NME3-202ENST00000561637 LTKP29376 864 aa39.22■■■■□ 3.87
NME3-202ENST00000561637 PPARGC1BQ86YN6 1023 aaKnown RBP39.21■■■■□ 3.87
NME3-202ENST00000561637 PRDM15P57071 1507 aaPredicted RBP39.19■■■■□ 3.86
NME3-202ENST00000561637 ANKRD30AQ9BXX3 1397 aa39.18■■■■□ 3.86
NME3-202ENST00000561637 ARHGAP23Q9P227 1491 aa39.17■■■■□ 3.86
NME3-202ENST00000561637 GRWD1Q9BQ67 446 aaKnown RBP eCLIP39.16■■■■□ 3.86
NME3-202ENST00000561637 RGS17Q9UGC6 210 aaPredicted RBP39.16■■■■□ 3.86
NME3-202ENST00000561637 SLIT1O75093 1534 aa39.15■■■■□ 3.86
NME3-202ENST00000561637 TXNDC2Q86VQ3 553 aa39.14■■■■□ 3.86
NME3-202ENST00000561637 ADGRL2O95490 1459 aa39.12■■■■□ 3.85
NME3-202ENST00000561637 PIK3C2BO00750 1634 aa39.07■■■■□ 3.85
NME3-202ENST00000561637 ARHGAP31Q2M1Z3 1444 aa39.06■■■■□ 3.84
NME3-202ENST00000561637 EID1Q9Y6B2 187 aa39■■■■□ 3.83
NME3-202ENST00000561637 KANK1Q14678 1352 aa38.96■■■■□ 3.83
NME3-202ENST00000561637 TMEM2Q9UHN6 1383 aa38.96■■■■□ 3.83
NME3-202ENST00000561637 FAM135BQ49AJ0 1406 aa38.96■■■■□ 3.83
NME3-202ENST00000561637 ANKRD50Q9ULJ7 1429 aa38.95■■■■□ 3.83
NME3-202ENST00000561637 LMTK2Q8IWU2 1503 aa38.94■■■■□ 3.82
NME3-202ENST00000561637 TMEM94Q12767 1356 aa38.92■■■■□ 3.82
NME3-202ENST00000561637 KDM5AP29375 1690 aaKnown RBP38.89■■■■□ 3.82
NME3-202ENST00000561637 ROBO1Q9Y6N7 1651 aa38.89■■■■□ 3.82
NME3-202ENST00000561637 POTEAQ6S8J7 498 aa38.88■■■■□ 3.81
NME3-202ENST00000561637 STAG3Q9UJ98 1225 aa38.88■■■■□ 3.81
NME3-202ENST00000561637 EFCAB6Q5THR3 1501 aa38.88■■■■□ 3.81
NME3-202ENST00000561637 ITGAEP38570 1179 aa38.87■■■■□ 3.81
NME3-202ENST00000561637 RBM33Q96EV2 1170 aaKnown RBP38.87■■■■□ 3.81
NME3-202ENST00000561637 TET3O43151 1660 aa38.87■■■■□ 3.81
NME3-202ENST00000561637 IDI1Q13907 227 aa38.85■■■■□ 3.81
NME3-202ENST00000561637 KCNA6P17658 529 aa38.83■■■■□ 3.81
NME3-202ENST00000561637 SLC26A8Q96RN1 970 aa38.83■■■■□ 3.81
NME3-202ENST00000561637 PROSER2Q86WR7 435 aaPredicted RBP38.8■■■■□ 3.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms