RNA–Protein interactions for RNA: ENST00000561557.1

LINC00566-201, long intergenic non-protein coding RNA 566, humanhuman

TSL 1 (best) BASIC

Gene LINC00566, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00566-201ENST00000561557 RTEL1-TNFRSF6BF6WH68 1400 aa14.79□□□□□ -0.04
LINC00566-201ENST00000561557 ARHGEF5Q12774 1597 aa14.78□□□□□ -0.04
LINC00566-201ENST00000561557 CCDC141Q6ZP82 1450 aa14.78□□□□□ -0.04
LINC00566-201ENST00000561557 C9orf84Q5VXU9 1444 aa14.78□□□□□ -0.04
LINC00566-201ENST00000561557 FGD6Q6ZV73 1430 aa14.78□□□□□ -0.04
LINC00566-201ENST00000561557 TCOF1Q13428 1488 aaKnown RBP14.76□□□□□ -0.05
LINC00566-201ENST00000561557 KIDINS220Q9ULH0 1771 aa14.76□□□□□ -0.05
LINC00566-201ENST00000561557 ARID4BQ4LE39 1312 aaPredicted RBP14.76□□□□□ -0.05
LINC00566-201ENST00000561557 PTPN23Q9H3S7 1636 aa14.76□□□□□ -0.05
LINC00566-201ENST00000561557 REREQ9P2R6 1566 aa14.76□□□□□ -0.05
LINC00566-201ENST00000561557 KDM4FA0A1W2PPD8 638 aa14.75□□□□□ -0.05
LINC00566-201ENST00000561557 CLEC11AQ9Y240 323 aa14.75□□□□□ -0.05
LINC00566-201ENST00000561557 DIP2CQ9Y2E4 1556 aa14.74□□□□□ -0.05
LINC00566-201ENST00000561557 ATP7AQ04656 1500 aa14.74□□□□□ -0.05
LINC00566-201ENST00000561557 INO80Q9ULG1 1556 aaPredicted RBP14.73□□□□□ -0.05
LINC00566-201ENST00000561557 ABCA6Q8N139 1617 aa14.72□□□□□ -0.05
LINC00566-201ENST00000561557 AGLP35573 1532 aa14.71□□□□□ -0.05
LINC00566-201ENST00000561557 SPDYE2BA6NHP3 402 aa14.71□□□□□ -0.05
LINC00566-201ENST00000561557 SPDYE6P0CI01 402 aa14.71□□□□□ -0.05
LINC00566-201ENST00000561557 SPDYE2Q495Y8 402 aa14.71□□□□□ -0.05
LINC00566-201ENST00000561557 PPARGC1BQ86YN6 1023 aaKnown RBP14.71□□□□□ -0.05
LINC00566-201ENST00000561557 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.71□□□□□ -0.06
LINC00566-201ENST00000561557 MAST1Q9Y2H9 1570 aa14.7□□□□□ -0.06
LINC00566-201ENST00000561557 SPDYE1Q8NFV5 336 aaPredicted RBP14.7□□□□□ -0.06
LINC00566-201ENST00000561557 A2MP01023 1474 aa14.69□□□□□ -0.06
LINC00566-201ENST00000561557 BCORL1Q5H9F3 1711 aa14.69□□□□□ -0.06
LINC00566-201ENST00000561557 ABCC5O15440 1437 aa14.69□□□□□ -0.06
LINC00566-201ENST00000561557 FAM50AQ14320 339 aaKnown RBP14.69□□□□□ -0.06
LINC00566-201ENST00000561557 DHX29Q7Z478 1369 aaKnown RBP14.69□□□□□ -0.06
LINC00566-201ENST00000561557 SHANK2Q9UPX8 1470 aa14.69□□□□□ -0.06
LINC00566-201ENST00000561557 ADGBQ8N7X0 1667 aa14.68□□□□□ -0.06
LINC00566-201ENST00000561557 DAPK1P53355 1430 aa14.68□□□□□ -0.06
LINC00566-201ENST00000561557 ADAMTSL3P82987 1691 aa14.68□□□□□ -0.06
LINC00566-201ENST00000561557 DNMT1P26358 1616 aaKnown RBP14.67□□□□□ -0.06
LINC00566-201ENST00000561557 SIGLEC1Q9BZZ2 1709 aa14.65□□□□□ -0.06
LINC00566-201ENST00000561557 PLXNC1O60486 1568 aa14.64□□□□□ -0.07
LINC00566-201ENST00000561557 MLECQ14165 292 aa14.64□□□□□ -0.07
LINC00566-201ENST00000561557 RRBP1Q9P2E9 1410 aaKnown RBP14.64□□□□□ -0.07
LINC00566-201ENST00000561557 ANKRD30AQ9BXX3 1397 aa14.63□□□□□ -0.07
LINC00566-201ENST00000561557 CROCC2H7BZ55 1655 aa14.63□□□□□ -0.07
LINC00566-201ENST00000561557 FOXD4L1Q9NU39 408 aa14.63□□□□□ -0.07
LINC00566-201ENST00000561557 ESF1Q9H501 851 aaKnown RBP14.62□□□□□ -0.07
LINC00566-201ENST00000561557 DUOX2Q9NRD8 1548 aa14.61□□□□□ -0.07
LINC00566-201ENST00000561557 NCOA1Q15788 1441 aa14.6□□□□□ -0.07
LINC00566-201ENST00000561557 KIF3BO15066 747 aa14.6□□□□□ -0.07
LINC00566-201ENST00000561557 POTEIP0CG38 1075 aa14.6□□□□□ -0.07
LINC00566-201ENST00000561557 CHIC2Q9UKJ5 165 aa14.6□□□□□ -0.07
LINC00566-201ENST00000561557 ADGRL2O95490 1459 aa14.6□□□□□ -0.07
LINC00566-201ENST00000561557 KIF15Q9NS87 1388 aa14.6□□□□□ -0.07
LINC00566-201ENST00000561557 MADDQ8WXG6 1647 aa14.59□□□□□ -0.07
LINC00566-201ENST00000561557 CNTLNQ9NXG0 1405 aa14.59□□□□□ -0.07
LINC00566-201ENST00000561557 PTPRMP28827 1452 aa14.59□□□□□ -0.07
LINC00566-201ENST00000561557 GGT6Q6P531 493 aa14.59□□□□□ -0.07
LINC00566-201ENST00000561557 RRP7BPQ9NSQ0 103 aa14.59□□□□□ -0.07
LINC00566-201ENST00000561557 ROCK1Q13464 1354 aa14.58□□□□□ -0.08
LINC00566-201ENST00000561557 FER1L4A9Z1Z3 1794 aa14.57□□□□□ -0.08
LINC00566-201ENST00000561557 ERBINQ96RT1 1412 aa14.57□□□□□ -0.08
LINC00566-201ENST00000561557 EIF2AK4Q9P2K8 1649 aaKnown RBP14.56□□□□□ -0.08
LINC00566-201ENST00000561557 CHADLQ6NUI6 762 aa14.56□□□□□ -0.08
LINC00566-201ENST00000561557 FAM135AQ9P2D6 1515 aa14.56□□□□□ -0.08
LINC00566-201ENST00000561557 RIMS1Q86UR5 1692 aaKnown RBP14.55□□□□□ -0.08
LINC00566-201ENST00000561557 ZBTB22O15209 634 aa14.55□□□□□ -0.08
LINC00566-201ENST00000561557 PTPRKQ15262 1439 aa14.55□□□□□ -0.08
LINC00566-201ENST00000561557 ITGAEP38570 1179 aa14.52□□□□□ -0.09
LINC00566-201ENST00000561557 ZMYM3Q14202 1370 aa14.51□□□□□ -0.09
LINC00566-201ENST00000561557 WASHC2CQ9Y4E1 1318 aa14.51□□□□□ -0.09
LINC00566-201ENST00000561557 MROH2AA6NES4 1674 aa14.51□□□□□ -0.09
LINC00566-201ENST00000561557 RNF17Q9BXT8 1623 aaKnown RBP14.51□□□□□ -0.09
LINC00566-201ENST00000561557 ANKRD50Q9ULJ7 1429 aa14.5□□□□□ -0.09
LINC00566-201ENST00000561557 SETD1BQ9UPS6 1966 aaKnown RBP14.5□□□□□ -0.09
LINC00566-201ENST00000561557 KDM5DQ9BY66 1539 aa14.48□□□□□ -0.09
LINC00566-201ENST00000561557 CEBPAP49715 358 aaPredicted RBP14.48□□□□□ -0.09
LINC00566-201ENST00000561557 KANK1Q14678 1352 aa14.47□□□□□ -0.09
LINC00566-201ENST00000561557 CLTCQ00610 1675 aaKnown RBP14.47□□□□□ -0.09
LINC00566-201ENST00000561557 NPATQ14207 1427 aa14.47□□□□□ -0.09
LINC00566-201ENST00000561557 C3P01024 1663 aa14.46□□□□□ -0.1
LINC00566-201ENST00000561557 ZC3H13Q5T200 1668 aaKnown RBP14.45□□□□□ -0.1
LINC00566-201ENST00000561557 PRDM15P57071 1507 aaPredicted RBP14.45□□□□□ -0.1
LINC00566-201ENST00000561557 DEPDC5O75140 1603 aa14.44□□□□□ -0.1
LINC00566-201ENST00000561557 MROH1Q8NDA8 1641 aa14.44□□□□□ -0.1
LINC00566-201ENST00000561557 ABCC3O15438 1527 aa14.44□□□□□ -0.1
LINC00566-201ENST00000561557 ARHGAP31Q2M1Z3 1444 aa14.42□□□□□ -0.1
LINC00566-201ENST00000561557 PZPP20742 1482 aa14.42□□□□□ -0.1
LINC00566-201ENST00000561557 VWDEQ8N2E2 1590 aa14.42□□□□□ -0.1
LINC00566-201ENST00000561557 ACIN1Q9UKV3 1341 aaKnown RBP14.41□□□□□ -0.1
LINC00566-201ENST00000561557 HFM1A2PYH4 1435 aa14.41□□□□□ -0.1
LINC00566-201ENST00000561557 NAIPQ13075 1403 aa14.41□□□□□ -0.1
LINC00566-201ENST00000561557 LMTK2Q8IWU2 1503 aa14.41□□□□□ -0.1
LINC00566-201ENST00000561557 ZNF692Q9BU19 519 aaPredicted RBP14.41□□□□□ -0.1
LINC00566-201ENST00000561557 SSUH2Q9Y2M2 353 aa14.4□□□□□ -0.1
LINC00566-201ENST00000561557 UHRF1BP1Q6BDS2 1440 aa14.4□□□□□ -0.1
LINC00566-201ENST00000561557 CD44P16070 742 aaKnown RBP14.39□□□□□ -0.11
LINC00566-201ENST00000561557 PREX1Q8TCU6 1659 aa14.39□□□□□ -0.11
LINC00566-201ENST00000561557 UNC13BO14795 1591 aa14.38□□□□□ -0.11
LINC00566-201ENST00000561557 LMTK3Q96Q04 1460 aa14.38□□□□□ -0.11
LINC00566-201ENST00000561557 GCC2Q8IWJ2 1684 aa14.37□□□□□ -0.11
LINC00566-201ENST00000561557 FBXO31Q5XUX0 539 aaPredicted RBP14.37□□□□□ -0.11
LINC00566-201ENST00000561557 CEP152O94986 1710 aa14.37□□□□□ -0.11
LINC00566-201ENST00000561557 CAMSAP1Q5T5Y3 1602 aa14.37□□□□□ -0.11
LINC00566-201ENST00000561557 NUP155O75694 1391 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms