RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 ADRA2BP18089 450 aa15.42■□□□□ 0.06
HERC1-212ENST00000561348 CNTLNQ9NXG0 1405 aa15.42■□□□□ 0.06
HERC1-212ENST00000561348 ZMYM3Q14202 1370 aa15.41■□□□□ 0.06
HERC1-212ENST00000561348 C3P01024 1663 aa15.41■□□□□ 0.06
HERC1-212ENST00000561348 SHANK2Q9UPX8 1470 aa15.4■□□□□ 0.06
HERC1-212ENST00000561348 DUOX2Q9NRD8 1548 aa15.39■□□□□ 0.05
HERC1-212ENST00000561348 NCOA1Q15788 1441 aa15.35■□□□□ 0.05
HERC1-212ENST00000561348 UHRF1BP1Q6BDS2 1440 aa15.35■□□□□ 0.05
HERC1-212ENST00000561348 FBXO31Q5XUX0 539 aaPredicted RBP15.35■□□□□ 0.05
HERC1-212ENST00000561348 PTPRKQ15262 1439 aa15.34■□□□□ 0.05
HERC1-212ENST00000561348 LMTK3Q96Q04 1460 aa15.34■□□□□ 0.05
HERC1-212ENST00000561348 KDM5DQ9BY66 1539 aa15.33■□□□□ 0.05
HERC1-212ENST00000561348 MROH2AA6NES4 1674 aa15.33■□□□□ 0.04
HERC1-212ENST00000561348 KANK1Q14678 1352 aa15.33■□□□□ 0.04
HERC1-212ENST00000561348 ERBINQ96RT1 1412 aa15.33■□□□□ 0.04
HERC1-212ENST00000561348 PREX1Q8TCU6 1659 aa15.32■□□□□ 0.04
HERC1-212ENST00000561348 CFAP65Q6ZU64 1925 aaKnown RBP15.32■□□□□ 0.04
HERC1-212ENST00000561348 EIF2AK4Q9P2K8 1649 aaKnown RBP15.32■□□□□ 0.04
HERC1-212ENST00000561348 CEP152O94986 1710 aa15.31■□□□□ 0.04
HERC1-212ENST00000561348 SETD1BQ9UPS6 1966 aaKnown RBP15.31■□□□□ 0.04
HERC1-212ENST00000561348 ANKRD50Q9ULJ7 1429 aa15.3■□□□□ 0.04
HERC1-212ENST00000561348 RNF17Q9BXT8 1623 aaKnown RBP15.29■□□□□ 0.04
HERC1-212ENST00000561348 ADGRL2O95490 1459 aa15.29■□□□□ 0.04
HERC1-212ENST00000561348 RRBP1Q9P2E9 1410 aaKnown RBP15.29■□□□□ 0.04
HERC1-212ENST00000561348 ABCC3O15438 1527 aa15.27■□□□□ 0.04
HERC1-212ENST00000561348 NPATQ14207 1427 aa15.26■□□□□ 0.03
HERC1-212ENST00000561348 TNRQ92752 1358 aa15.26■□□□□ 0.03
HERC1-212ENST00000561348 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.26■□□□□ 0.03
HERC1-212ENST00000561348 MROH1Q8NDA8 1641 aa15.26■□□□□ 0.03
HERC1-212ENST00000561348 PZPP20742 1482 aa15.25■□□□□ 0.03
HERC1-212ENST00000561348 ROCK1Q13464 1354 aa15.24■□□□□ 0.03
HERC1-212ENST00000561348 ZC3H13Q5T200 1668 aaKnown RBP15.24■□□□□ 0.03
HERC1-212ENST00000561348 CAMSAP1Q5T5Y3 1602 aa15.24■□□□□ 0.03
HERC1-212ENST00000561348 TRIM52Q96A61 297 aa15.23■□□□□ 0.03
HERC1-212ENST00000561348 MYO3AQ8NEV4 1616 aa15.23■□□□□ 0.03
HERC1-212ENST00000561348 PRDM15P57071 1507 aaPredicted RBP15.22■□□□□ 0.03
HERC1-212ENST00000561348 STAG3Q9UJ98 1225 aa15.22■□□□□ 0.03
HERC1-212ENST00000561348 FAM135AQ9P2D6 1515 aa15.22■□□□□ 0.03
HERC1-212ENST00000561348 NCKAP5LQ9HCH0 1330 aa15.21■□□□□ 0.03
HERC1-212ENST00000561348 NUP155O75694 1391 aa15.21■□□□□ 0.02
HERC1-212ENST00000561348 CEP170BQ9Y4F5 1589 aaPredicted RBP15.2■□□□□ 0.02
HERC1-212ENST00000561348 DEPDC5O75140 1603 aa15.2■□□□□ 0.02
HERC1-212ENST00000561348 ERVK-7P63135 1459 aa15.18■□□□□ 0.02
HERC1-212ENST00000561348 A2ML1A8K2U0 1454 aa15.17■□□□□ 0.02
HERC1-212ENST00000561348 CHGAP10645 457 aaKnown RBP15.17■□□□□ 0.02
HERC1-212ENST00000561348 DMRT2Q9Y5R5 561 aa15.17■□□□□ 0.02
HERC1-212ENST00000561348 THEMISQ8N1K5 641 aaPredicted RBP15.16■□□□□ 0.02
HERC1-212ENST00000561348 NAIPQ13075 1403 aa15.15■□□□□ 0.02
HERC1-212ENST00000561348 UGGT1Q9NYU2 1555 aa15.15■□□□□ 0.02
HERC1-212ENST00000561348 STRCQ7RTU9 1775 aa15.14■□□□□ 0.01
HERC1-212ENST00000561348 UNC13BO14795 1591 aa15.14■□□□□ 0.01
HERC1-212ENST00000561348 SPATA31D1Q6ZQQ2 1576 aa15.14■□□□□ 0.01
HERC1-212ENST00000561348 NLRP1Q9C000 1473 aa15.14■□□□□ 0.01
HERC1-212ENST00000561348 ZNF142P52746 1687 aaPredicted RBP15.13■□□□□ 0.01
HERC1-212ENST00000561348 ARHGAP31Q2M1Z3 1444 aa15.13■□□□□ 0.01
HERC1-212ENST00000561348 EFCAB6Q5THR3 1501 aa15.12■□□□□ 0.01
HERC1-212ENST00000561348 VWDEQ8N2E2 1590 aa15.12■□□□□ 0.01
HERC1-212ENST00000561348 ANKLE2Q86XL3 938 aa15.12■□□□□ 0.01
HERC1-212ENST00000561348 LMTK2Q8IWU2 1503 aa15.12■□□□□ 0.01
HERC1-212ENST00000561348 PKD2Q13563 968 aa15.11■□□□□ 0.01
HERC1-212ENST00000561348 IDI1Q13907 227 aa15.11■□□□□ 0.01
HERC1-212ENST00000561348 TET3O43151 1660 aa15.11■□□□□ 0.01
HERC1-212ENST00000561348 GCC2Q8IWJ2 1684 aa15.11■□□□□ 0.01
HERC1-212ENST00000561348 HFM1A2PYH4 1435 aa15.1■□□□□ 0.01
HERC1-212ENST00000561348 BCANQ96GW7 911 aa15.1■□□□□ 0.01
HERC1-212ENST00000561348 SLC4A1APQ9BWU0 796 aaKnown RBP15.09■□□□□ 0.01
HERC1-212ENST00000561348 IQGAP3Q86VI3 1631 aa15.09■□□□□ 0.01
HERC1-212ENST00000561348 TXNDC2Q86VQ3 553 aa15.08■□□□□ 0
HERC1-212ENST00000561348 PIAS4Q8N2W9 510 aaPredicted RBP15.08■□□□□ 0
HERC1-212ENST00000561348 EID1Q9Y6B2 187 aa15.08■□□□□ 0
HERC1-212ENST00000561348 PIK3C2BO00750 1634 aa15.07■□□□□ 0
HERC1-212ENST00000561348 E9PCH4 1651 aa15.07■□□□□ 0
HERC1-212ENST00000561348 SYNMO15061 1565 aa15.07■□□□□ 0
HERC1-212ENST00000561348 SLC52A1Q9NWF4 448 aa15.06■□□□□ 0
HERC1-212ENST00000561348 PLA2R1Q13018 1463 aa15.06■□□□□ 0
HERC1-212ENST00000561348 NUTM2DQ5VT03 806 aaPredicted RBP15.05■□□□□ -0
HERC1-212ENST00000561348 PTPRTO14522 1441 aa15.05■□□□□ -0
HERC1-212ENST00000561348 RPRD2Q5VT52 1461 aaKnown RBP15.05■□□□□ -0
HERC1-212ENST00000561348 UBR1Q8IWV7 1749 aa15.05■□□□□ -0
HERC1-212ENST00000561348 POLR1AO95602 1720 aaPredicted RBP15.04■□□□□ -0
HERC1-212ENST00000561348 NOS1P29475 1434 aa15.04■□□□□ -0
HERC1-212ENST00000561348 PPP1R15AO75807 674 aaPredicted RBP15.04■□□□□ -0
HERC1-212ENST00000561348 SETD5Q9C0A6 1442 aa15.03■□□□□ -0
HERC1-212ENST00000561348 ZNF335Q9H4Z2 1342 aaPredicted RBP15.03■□□□□ -0
HERC1-212ENST00000561348 ZNF326Q5BKZ1 582 aaKnown RBP15.03■□□□□ -0
HERC1-212ENST00000561348 LTKP29376 864 aa15.02■□□□□ -0
HERC1-212ENST00000561348 CERKQ8TCT0 537 aa15.02■□□□□ -0
HERC1-212ENST00000561348 NPHP4O75161 1426 aaPredicted RBP15.01□□□□□ -0.01
HERC1-212ENST00000561348 RAB3GAP2Q9H2M9 1393 aa14.99□□□□□ -0.01
HERC1-212ENST00000561348 TMEM2Q9UHN6 1383 aa14.99□□□□□ -0.01
HERC1-212ENST00000561348 MYO5BQ9ULV0 1848 aa14.99□□□□□ -0.01
HERC1-212ENST00000561348 ADGRB3O60242 1522 aa14.99□□□□□ -0.01
HERC1-212ENST00000561348 ILDR1Q86SU0 546 aaPredicted RBP14.99□□□□□ -0.01
HERC1-212ENST00000561348 MPHOSPH9Q99550 1183 aa14.99□□□□□ -0.01
HERC1-212ENST00000561348 SCAF11Q99590 1463 aaKnown RBP14.99□□□□□ -0.01
HERC1-212ENST00000561348 NEURL4Q96JN8 1562 aa14.98□□□□□ -0.01
HERC1-212ENST00000561348 SPHKAPQ2M3C7 1700 aa14.98□□□□□ -0.01
HERC1-212ENST00000561348 HDGFP51858 240 aaKnown RBP14.97□□□□□ -0.01
HERC1-212ENST00000561348 SLC26A8Q96RN1 970 aa14.97□□□□□ -0.01
HERC1-212ENST00000561348 IQGAP1P46940 1657 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms