RNA–Protein interactions for RNA: ENST00000561290.1

CRTC3-214, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-214ENST00000561290 RNF17Q9BXT8 1623 aaKnown RBP22.71■■□□□ 1.23
CRTC3-214ENST00000561290 EIF2AK4Q9P2K8 1649 aaKnown RBP22.71■■□□□ 1.23
CRTC3-214ENST00000561290 KIF3BO15066 747 aa22.7■■□□□ 1.22
CRTC3-214ENST00000561290 APLP2Q06481 763 aa22.7■■□□□ 1.22
CRTC3-214ENST00000561290 CAMSAP1Q5T5Y3 1602 aa22.69■■□□□ 1.22
CRTC3-214ENST00000561290 PLA2R1Q13018 1463 aa22.69■■□□□ 1.22
CRTC3-214ENST00000561290 SHANK2Q9UPX8 1470 aa22.69■■□□□ 1.22
CRTC3-214ENST00000561290 CROCC2H7BZ55 1655 aa22.68■■□□□ 1.22
CRTC3-214ENST00000561290 PZPP20742 1482 aa22.68■■□□□ 1.22
CRTC3-214ENST00000561290 PTPN23Q9H3S7 1636 aa22.68■■□□□ 1.22
CRTC3-214ENST00000561290 ZC3H13Q5T200 1668 aaKnown RBP22.67■■□□□ 1.22
CRTC3-214ENST00000561290 CERKQ8TCT0 537 aa22.66■■□□□ 1.22
CRTC3-214ENST00000561290 TCOF1Q13428 1488 aaKnown RBP22.65■■□□□ 1.22
CRTC3-214ENST00000561290 DUOX2Q9NRD8 1548 aa22.64■■□□□ 1.21
CRTC3-214ENST00000561290 A2ML1A8K2U0 1454 aa22.64■■□□□ 1.21
CRTC3-214ENST00000561290 FGD6Q6ZV73 1430 aa22.64■■□□□ 1.21
CRTC3-214ENST00000561290 DNMT1P26358 1616 aaKnown RBP22.62■■□□□ 1.21
CRTC3-214ENST00000561290 WASHC2CQ9Y4E1 1318 aa22.61■■□□□ 1.21
CRTC3-214ENST00000561290 MROH1Q8NDA8 1641 aa22.61■■□□□ 1.21
CRTC3-214ENST00000561290 ABCC5O15440 1437 aa22.6■■□□□ 1.21
CRTC3-214ENST00000561290 ABCC3O15438 1527 aa22.6■■□□□ 1.21
CRTC3-214ENST00000561290 TNRQ92752 1358 aa22.6■■□□□ 1.21
CRTC3-214ENST00000561290 DAPK1P53355 1430 aa22.58■■□□□ 1.21
CRTC3-214ENST00000561290 ERBINQ96RT1 1412 aa22.57■■□□□ 1.2
CRTC3-214ENST00000561290 LTBP4Q8N2S1 1624 aa22.57■■□□□ 1.2
CRTC3-214ENST00000561290 PKD2Q13563 968 aa22.57■■□□□ 1.2
CRTC3-214ENST00000561290 NLRP1Q9C000 1473 aa22.56■■□□□ 1.2
CRTC3-214ENST00000561290 KIF15Q9NS87 1388 aa22.56■■□□□ 1.2
CRTC3-214ENST00000561290 PRDM15P57071 1507 aaPredicted RBP22.56■■□□□ 1.2
CRTC3-214ENST00000561290 IQSEC2Q5JU85 1478 aa22.54■■□□□ 1.2
CRTC3-214ENST00000561290 SPATA31D1Q6ZQQ2 1576 aa22.54■■□□□ 1.2
CRTC3-214ENST00000561290 FBXO31Q5XUX0 539 aaPredicted RBP22.53■■□□□ 1.2
CRTC3-214ENST00000561290 POLR1AO95602 1720 aaPredicted RBP22.52■■□□□ 1.2
CRTC3-214ENST00000561290 DEPDC5O75140 1603 aa22.52■■□□□ 1.2
CRTC3-214ENST00000561290 CEP152O94986 1710 aa22.51■■□□□ 1.19
CRTC3-214ENST00000561290 NCKAP5LQ9HCH0 1330 aa22.51■■□□□ 1.19
CRTC3-214ENST00000561290 ERVK-7P63135 1459 aa22.48■■□□□ 1.19
CRTC3-214ENST00000561290 UGGT1Q9NYU2 1555 aa22.48■■□□□ 1.19
CRTC3-214ENST00000561290 ARHGAP31Q2M1Z3 1444 aa22.48■■□□□ 1.19
CRTC3-214ENST00000561290 ADGRL2O95490 1459 aa22.47■■□□□ 1.19
CRTC3-214ENST00000561290 NEURL4Q96JN8 1562 aa22.47■■□□□ 1.19
CRTC3-214ENST00000561290 ANKRD30AQ9BXX3 1397 aa22.47■■□□□ 1.19
CRTC3-214ENST00000561290 RRP7BPQ9NSQ0 103 aa22.44■■□□□ 1.18
CRTC3-214ENST00000561290 VWDEQ8N2E2 1590 aa22.42■■□□□ 1.18
CRTC3-214ENST00000561290 LMTK2Q8IWU2 1503 aa22.42■■□□□ 1.18
CRTC3-214ENST00000561290 THEMISQ8N1K5 641 aaPredicted RBP22.42■■□□□ 1.18
CRTC3-214ENST00000561290 MED14O60244 1454 aa22.41■■□□□ 1.18
CRTC3-214ENST00000561290 ZNF335Q9H4Z2 1342 aaPredicted RBP22.4■■□□□ 1.18
CRTC3-214ENST00000561290 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.39■■□□□ 1.18
CRTC3-214ENST00000561290 KANK1Q14678 1352 aa22.38■■□□□ 1.17
CRTC3-214ENST00000561290 UBR1Q8IWV7 1749 aa22.37■■□□□ 1.17
CRTC3-214ENST00000561290 ANKLE2Q86XL3 938 aa22.37■■□□□ 1.17
CRTC3-214ENST00000561290 CHIC2Q9UKJ5 165 aa22.35■■□□□ 1.17
CRTC3-214ENST00000561290 CFAP65Q6ZU64 1925 aaKnown RBP22.35■■□□□ 1.17
CRTC3-214ENST00000561290 FAM50AQ14320 339 aaKnown RBP22.34■■□□□ 1.17
CRTC3-214ENST00000561290 CPS1P31327 1500 aa22.34■■□□□ 1.17
CRTC3-214ENST00000561290 IQGAP1P46940 1657 aa22.33■■□□□ 1.17
CRTC3-214ENST00000561290 NPHP4O75161 1426 aaPredicted RBP22.33■■□□□ 1.17
CRTC3-214ENST00000561290 EFCAB6Q5THR3 1501 aa22.33■■□□□ 1.17
CRTC3-214ENST00000561290 KDM5AP29375 1690 aaKnown RBP22.32■■□□□ 1.16
CRTC3-214ENST00000561290 ANKRD50Q9ULJ7 1429 aa22.31■■□□□ 1.16
CRTC3-214ENST00000561290 SLIT1O75093 1534 aa22.31■■□□□ 1.16
CRTC3-214ENST00000561290 ARHGAP23Q9P227 1491 aa22.3■■□□□ 1.16
CRTC3-214ENST00000561290 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.3■■□□□ 1.16
CRTC3-214ENST00000561290 PIK3C2BO00750 1634 aa22.28■■□□□ 1.16
CRTC3-214ENST00000561290 ROCK1Q13464 1354 aa22.27■■□□□ 1.16
CRTC3-214ENST00000561290 RPRD2Q5VT52 1461 aaKnown RBP22.27■■□□□ 1.16
CRTC3-214ENST00000561290 SCAF11Q99590 1463 aaKnown RBP22.27■■□□□ 1.16
CRTC3-214ENST00000561290 NOS1P29475 1434 aa22.26■■□□□ 1.15
CRTC3-214ENST00000561290 UNC13BO14795 1591 aa22.25■■□□□ 1.15
CRTC3-214ENST00000561290 SYNMO15061 1565 aa22.25■■□□□ 1.15
CRTC3-214ENST00000561290 TET3O43151 1660 aa22.24■■□□□ 1.15
CRTC3-214ENST00000561290 GCC2Q8IWJ2 1684 aa22.21■■□□□ 1.15
CRTC3-214ENST00000561290 TMEM2Q9UHN6 1383 aa22.2■■□□□ 1.14
CRTC3-214ENST00000561290 ADGRB3O60242 1522 aa22.2■■□□□ 1.14
CRTC3-214ENST00000561290 UBAP1LF5GYI3 381 aa22.18■■□□□ 1.14
CRTC3-214ENST00000561290 STRCP1A6NGW2 1772 aa22.17■■□□□ 1.14
CRTC3-214ENST00000561290 IQGAP3Q86VI3 1631 aa22.17■■□□□ 1.14
CRTC3-214ENST00000561290 LTKP29376 864 aa22.16■■□□□ 1.14
CRTC3-214ENST00000561290 IDI1Q13907 227 aa22.16■■□□□ 1.14
CRTC3-214ENST00000561290 SLC52A1Q9NWF4 448 aa22.16■■□□□ 1.14
CRTC3-214ENST00000561290 TXNDC2Q86VQ3 553 aa22.15■■□□□ 1.14
CRTC3-214ENST00000561290 EID1Q9Y6B2 187 aa22.15■■□□□ 1.14
CRTC3-214ENST00000561290 STAG3Q9UJ98 1225 aa22.13■■□□□ 1.13
CRTC3-214ENST00000561290 LRRC7Q96NW7 1537 aa22.12■■□□□ 1.13
CRTC3-214ENST00000561290 RRBP1Q9P2E9 1410 aaKnown RBP22.12■■□□□ 1.13
CRTC3-214ENST00000561290 E9PCH4 1651 aa22.11■■□□□ 1.13
CRTC3-214ENST00000561290 TOM1O60784 492 aa22.1■■□□□ 1.13
CRTC3-214ENST00000561290 ALKQ9UM73 1620 aa22.09■■□□□ 1.13
CRTC3-214ENST00000561290 TMEM131LA2VDJ0 1609 aa22.07■■□□□ 1.12
CRTC3-214ENST00000561290 ZFYVE9O95405 1425 aa22.06■■□□□ 1.12
CRTC3-214ENST00000561290 MYO5BQ9ULV0 1848 aa22.05■■□□□ 1.12
CRTC3-214ENST00000561290 PPARGC1BQ86YN6 1023 aaKnown RBP22.04■■□□□ 1.12
CRTC3-214ENST00000561290 NUP155O75694 1391 aa22.03■■□□□ 1.12
CRTC3-214ENST00000561290 NWD1Q149M9 1564 aa22.02■■□□□ 1.12
CRTC3-214ENST00000561290 XIRP1Q702N8 1843 aaKnown RBP22.01■■□□□ 1.11
CRTC3-214ENST00000561290 DISP3Q9P2K9 1392 aa22.01■■□□□ 1.11
CRTC3-214ENST00000561290 ITGAEP38570 1179 aa22.01■■□□□ 1.11
CRTC3-214ENST00000561290 PLEKHG1Q9ULL1 1385 aa21.99■■□□□ 1.11
CRTC3-214ENST00000561290 NKTRP30414 1462 aaKnown RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms