RNA–Protein interactions for RNA: ENST00000561233.1

LINS1-213, Transcript of lines homolog 1, humanhuman

TSL 3

Gene LINS1, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1-213ENST00000561233 PTPN23Q9H3S7 1636 aa11□□□□□ -0.65
LINS1-213ENST00000561233 FGD6Q6ZV73 1430 aa11□□□□□ -0.65
LINS1-213ENST00000561233 ABCB7O75027 752 aa10.99□□□□□ -0.65
LINS1-213ENST00000561233 CEBPAP49715 358 aaPredicted RBP10.98□□□□□ -0.65
LINS1-213ENST00000561233 GGT6Q6P531 493 aa10.98□□□□□ -0.65
LINS1-213ENST00000561233 CNTLNQ9NXG0 1405 aa10.98□□□□□ -0.65
LINS1-213ENST00000561233 ZNF219Q9P2Y4 722 aaPredicted RBP10.97□□□□□ -0.65
LINS1-213ENST00000561233 DHX29Q7Z478 1369 aaKnown RBP10.97□□□□□ -0.65
LINS1-213ENST00000561233 MAST1Q9Y2H9 1570 aa10.96□□□□□ -0.65
LINS1-213ENST00000561233 LMTK3Q96Q04 1460 aa10.96□□□□□ -0.65
LINS1-213ENST00000561233 TCOF1Q13428 1488 aaKnown RBP10.95□□□□□ -0.66
LINS1-213ENST00000561233 SHANK2Q9UPX8 1470 aa10.95□□□□□ -0.66
LINS1-213ENST00000561233 DAPK1P53355 1430 aa10.95□□□□□ -0.66
LINS1-213ENST00000561233 KIF3BO15066 747 aa10.95□□□□□ -0.66
LINS1-213ENST00000561233 FAM50AQ14320 339 aaKnown RBP10.95□□□□□ -0.66
LINS1-213ENST00000561233 PPARGC1BQ86YN6 1023 aaKnown RBP10.95□□□□□ -0.66
LINS1-213ENST00000561233 CROCC2H7BZ55 1655 aa10.95□□□□□ -0.66
LINS1-213ENST00000561233 C3P01024 1663 aa10.94□□□□□ -0.66
LINS1-213ENST00000561233 CLTCQ00610 1675 aaKnown RBP10.94□□□□□ -0.66
LINS1-213ENST00000561233 DNMT1P26358 1616 aaKnown RBP10.94□□□□□ -0.66
LINS1-213ENST00000561233 ABCC5O15440 1437 aa10.93□□□□□ -0.66
LINS1-213ENST00000561233 UHRF1BP1Q6BDS2 1440 aa10.93□□□□□ -0.66
LINS1-213ENST00000561233 MROH2AA6NES4 1674 aa10.93□□□□□ -0.66
LINS1-213ENST00000561233 PREX1Q8TCU6 1659 aa10.93□□□□□ -0.66
LINS1-213ENST00000561233 HSPA2P54652 639 aa10.93□□□□□ -0.66
LINS1-213ENST00000561233 KIF15Q9NS87 1388 aa10.92□□□□□ -0.66
LINS1-213ENST00000561233 ZMYM3Q14202 1370 aa10.91□□□□□ -0.66
LINS1-213ENST00000561233 KDM5DQ9BY66 1539 aa10.91□□□□□ -0.66
LINS1-213ENST00000561233 DUOX2Q9NRD8 1548 aa10.91□□□□□ -0.66
LINS1-213ENST00000561233 RRP7BPQ9NSQ0 103 aa10.91□□□□□ -0.66
LINS1-213ENST00000561233 CHIC2Q9UKJ5 165 aa10.91□□□□□ -0.66
LINS1-213ENST00000561233 WASHC2CQ9Y4E1 1318 aa10.9□□□□□ -0.66
LINS1-213ENST00000561233 EIF2AK4Q9P2K8 1649 aaKnown RBP10.9□□□□□ -0.66
LINS1-213ENST00000561233 ANKRD30AQ9BXX3 1397 aa10.9□□□□□ -0.67
LINS1-213ENST00000561233 NPATQ14207 1427 aa10.89□□□□□ -0.67
LINS1-213ENST00000561233 FAM135AQ9P2D6 1515 aa10.89□□□□□ -0.67
LINS1-213ENST00000561233 RNF17Q9BXT8 1623 aaKnown RBP10.88□□□□□ -0.67
LINS1-213ENST00000561233 ERBINQ96RT1 1412 aa10.88□□□□□ -0.67
LINS1-213ENST00000561233 PTPRKQ15262 1439 aa10.86□□□□□ -0.67
LINS1-213ENST00000561233 RBM42Q9BTD8 480 aaKnown RBP10.86□□□□□ -0.67
LINS1-213ENST00000561233 NCOA1Q15788 1441 aa10.85□□□□□ -0.67
LINS1-213ENST00000561233 ABCC3O15438 1527 aa10.85□□□□□ -0.67
LINS1-213ENST00000561233 MYO3AQ8NEV4 1616 aa10.85□□□□□ -0.67
LINS1-213ENST00000561233 ITGAEP38570 1179 aa10.85□□□□□ -0.67
LINS1-213ENST00000561233 ADGRL2O95490 1459 aa10.85□□□□□ -0.67
LINS1-213ENST00000561233 PZPP20742 1482 aa10.85□□□□□ -0.67
LINS1-213ENST00000561233 ZC3H13Q5T200 1668 aaKnown RBP10.85□□□□□ -0.67
LINS1-213ENST00000561233 MROH1Q8NDA8 1641 aa10.84□□□□□ -0.67
LINS1-213ENST00000561233 PRDM15P57071 1507 aaPredicted RBP10.84□□□□□ -0.67
LINS1-213ENST00000561233 CEP170BQ9Y4F5 1589 aaPredicted RBP10.83□□□□□ -0.68
LINS1-213ENST00000561233 KANK1Q14678 1352 aa10.83□□□□□ -0.68
LINS1-213ENST00000561233 TNRQ92752 1358 aa10.83□□□□□ -0.68
LINS1-213ENST00000561233 FBXO31Q5XUX0 539 aaPredicted RBP10.83□□□□□ -0.68
LINS1-213ENST00000561233 SETD1BQ9UPS6 1966 aaKnown RBP10.83□□□□□ -0.68
LINS1-213ENST00000561233 CEP152O94986 1710 aa10.82□□□□□ -0.68
LINS1-213ENST00000561233 ZNF142P52746 1687 aaPredicted RBP10.82□□□□□ -0.68
LINS1-213ENST00000561233 CAMSAP1Q5T5Y3 1602 aa10.81□□□□□ -0.68
LINS1-213ENST00000561233 SLC4A2P04920 1241 aa10.81□□□□□ -0.68
LINS1-213ENST00000561233 ANKRD50Q9ULJ7 1429 aa10.81□□□□□ -0.68
LINS1-213ENST00000561233 DEPDC5O75140 1603 aa10.8□□□□□ -0.68
LINS1-213ENST00000561233 A2ML1A8K2U0 1454 aa10.8□□□□□ -0.68
LINS1-213ENST00000561233 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.79□□□□□ -0.68
LINS1-213ENST00000561233 RRBP1Q9P2E9 1410 aaKnown RBP10.79□□□□□ -0.68
LINS1-213ENST00000561233 CHRDL2Q6WN34 429 aa10.79□□□□□ -0.68
LINS1-213ENST00000561233 ERVK-7P63135 1459 aa10.79□□□□□ -0.68
LINS1-213ENST00000561233 ROCK1Q13464 1354 aa10.78□□□□□ -0.68
LINS1-213ENST00000561233 SPATA31D1Q6ZQQ2 1576 aa10.77□□□□□ -0.68
LINS1-213ENST00000561233 NLRP1Q9C000 1473 aa10.77□□□□□ -0.69
LINS1-213ENST00000561233 STRCQ7RTU9 1775 aa10.77□□□□□ -0.69
LINS1-213ENST00000561233 PLA2R1Q13018 1463 aa10.76□□□□□ -0.69
LINS1-213ENST00000561233 SAMD1Q6SPF0 538 aaPredicted RBP10.76□□□□□ -0.69
LINS1-213ENST00000561233 ARHGAP31Q2M1Z3 1444 aa10.75□□□□□ -0.69
LINS1-213ENST00000561233 LMTK2Q8IWU2 1503 aa10.75□□□□□ -0.69
LINS1-213ENST00000561233 VWDEQ8N2E2 1590 aa10.75□□□□□ -0.69
LINS1-213ENST00000561233 UGGT1Q9NYU2 1555 aa10.75□□□□□ -0.69
LINS1-213ENST00000561233 NCKAP5LQ9HCH0 1330 aa10.75□□□□□ -0.69
LINS1-213ENST00000561233 PTPRTO14522 1441 aa10.75□□□□□ -0.69
LINS1-213ENST00000561233 EFCAB6Q5THR3 1501 aa10.74□□□□□ -0.69
LINS1-213ENST00000561233 PKD2Q13563 968 aa10.74□□□□□ -0.69
LINS1-213ENST00000561233 UNC13BO14795 1591 aa10.73□□□□□ -0.69
LINS1-213ENST00000561233 THEMISQ8N1K5 641 aaPredicted RBP10.73□□□□□ -0.69
LINS1-213ENST00000561233 TET3O43151 1660 aa10.71□□□□□ -0.69
LINS1-213ENST00000561233 NUP155O75694 1391 aa10.71□□□□□ -0.69
LINS1-213ENST00000561233 STAG3Q9UJ98 1225 aa10.71□□□□□ -0.69
LINS1-213ENST00000561233 CFAP65Q6ZU64 1925 aaKnown RBP10.7□□□□□ -0.7
LINS1-213ENST00000561233 POLR1AO95602 1720 aaPredicted RBP10.7□□□□□ -0.7
LINS1-213ENST00000561233 RPRD2Q5VT52 1461 aaKnown RBP10.7□□□□□ -0.7
LINS1-213ENST00000561233 ILDR1Q86SU0 546 aaPredicted RBP10.7□□□□□ -0.7
LINS1-213ENST00000561233 ANKLE2Q86XL3 938 aa10.7□□□□□ -0.7
LINS1-213ENST00000561233 IQGAP3Q86VI3 1631 aa10.69□□□□□ -0.7
LINS1-213ENST00000561233 UBR1Q8IWV7 1749 aa10.69□□□□□ -0.7
LINS1-213ENST00000561233 GCC2Q8IWJ2 1684 aa10.69□□□□□ -0.7
LINS1-213ENST00000561233 PIK3C2BO00750 1634 aa10.69□□□□□ -0.7
LINS1-213ENST00000561233 SYNMO15061 1565 aa10.69□□□□□ -0.7
LINS1-213ENST00000561233 NAIPQ13075 1403 aa10.68□□□□□ -0.7
LINS1-213ENST00000561233 CERKQ8TCT0 537 aa10.68□□□□□ -0.7
LINS1-213ENST00000561233 NEURL4Q96JN8 1562 aa10.68□□□□□ -0.7
LINS1-213ENST00000561233 NOS1P29475 1434 aa10.67□□□□□ -0.7
LINS1-213ENST00000561233 HFM1A2PYH4 1435 aa10.67□□□□□ -0.7
LINS1-213ENST00000561233 NPHP4O75161 1426 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms