RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 EFCAB2Q5VUJ9 269 aa19■□□□□ 0.63
RABGGTA-220ENST00000560998 DUOX2Q9NRD8 1548 aa19■□□□□ 0.63
RABGGTA-220ENST00000560998 RALGAPBQ86X10 1494 aa19■□□□□ 0.63
RABGGTA-220ENST00000560998 KIF7Q2M1P5 1343 aa18.99■□□□□ 0.63
RABGGTA-220ENST00000560998 IQGAP3Q86VI3 1631 aa18.99■□□□□ 0.63
RABGGTA-220ENST00000560998 KDM5CP41229 1560 aa18.99■□□□□ 0.63
RABGGTA-220ENST00000560998 ARAP3Q8WWN8 1544 aa18.98■□□□□ 0.63
RABGGTA-220ENST00000560998 USP47Q96K76 1375 aa18.98■□□□□ 0.63
RABGGTA-220ENST00000560998 ZNF326Q5BKZ1 582 aaKnown RBP18.97■□□□□ 0.63
RABGGTA-220ENST00000560998 BCORL1Q5H9F3 1711 aa18.96■□□□□ 0.63
RABGGTA-220ENST00000560998 ERBINQ96RT1 1412 aa18.96■□□□□ 0.63
RABGGTA-220ENST00000560998 MAGI2Q86UL8 1455 aa18.96■□□□□ 0.63
RABGGTA-220ENST00000560998 TRAPPC8Q9Y2L5 1435 aa18.95■□□□□ 0.62
RABGGTA-220ENST00000560998 ANO8Q9HCE9 1232 aaPredicted RBP18.94■□□□□ 0.62
RABGGTA-220ENST00000560998 WDR7Q9Y4E6 1490 aa18.93■□□□□ 0.62
RABGGTA-220ENST00000560998 PLA2R1Q13018 1463 aa18.93■□□□□ 0.62
RABGGTA-220ENST00000560998 HNRNPUQ00839 825 aaKnown RBP eCLIP18.93■□□□□ 0.62
RABGGTA-220ENST00000560998 CCDC144AA2RUR9 1427 aa18.92■□□□□ 0.62
RABGGTA-220ENST00000560998 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.91■□□□□ 0.621e-6■■□□□ 13.5
RABGGTA-220ENST00000560998 DCAF11Q8TEB1 546 aa18.9■□□□□ 0.62
RABGGTA-220ENST00000560998 PRKRIP1Q9H875 184 aaPredicted RBP18.9■□□□□ 0.62
RABGGTA-220ENST00000560998 RTL5Q5HYW3 569 aaPredicted RBP18.89■□□□□ 0.61
RABGGTA-220ENST00000560998 KDM2AQ9Y2K7 1162 aa18.89■□□□□ 0.61
RABGGTA-220ENST00000560998 ABCA9Q8IUA7 1624 aa18.88■□□□□ 0.61
RABGGTA-220ENST00000560998 RTEL1-TNFRSF6BF6WH68 1400 aa18.88■□□□□ 0.61
RABGGTA-220ENST00000560998 ARID4BQ4LE39 1312 aaPredicted RBP18.88■□□□□ 0.61
RABGGTA-220ENST00000560998 ZFYVE16Q7Z3T8 1539 aa18.87■□□□□ 0.61
RABGGTA-220ENST00000560998 CARD11Q9BXL7 1154 aa18.87■□□□□ 0.61
RABGGTA-220ENST00000560998 ATP10AO60312 1499 aa18.87■□□□□ 0.61
RABGGTA-220ENST00000560998 SPAG9O60271 1321 aaKnown RBP18.86■□□□□ 0.61
RABGGTA-220ENST00000560998 TRPM1Q7Z4N2 1603 aa18.85■□□□□ 0.61
RABGGTA-220ENST00000560998 IRX6P78412 446 aaPredicted RBP18.85■□□□□ 0.61
RABGGTA-220ENST00000560998 PRAG1Q86YV5 1406 aa18.85■□□□□ 0.61
RABGGTA-220ENST00000560998 NBR1Q14596 966 aa18.84■□□□□ 0.61
RABGGTA-220ENST00000560998 FANCAO15360 1455 aa18.83■□□□□ 0.61
RABGGTA-220ENST00000560998 A2MP01023 1474 aa18.83■□□□□ 0.61
RABGGTA-220ENST00000560998 DHX29Q7Z478 1369 aaKnown RBP18.83■□□□□ 0.61
RABGGTA-220ENST00000560998 CCDC184Q52MB2 194 aa18.83■□□□□ 0.61
RABGGTA-220ENST00000560998 AFAP1Q8N556 730 aa18.82■□□□□ 0.6
RABGGTA-220ENST00000560998 INO80Q9ULG1 1556 aaPredicted RBP18.82■□□□□ 0.6
RABGGTA-220ENST00000560998 ANP32AP39687 249 aaKnown RBP18.82■□□□□ 0.6
RABGGTA-220ENST00000560998 ASXL2Q76L83 1435 aa18.81■□□□□ 0.6
RABGGTA-220ENST00000560998 IPO9Q96P70 1041 aaKnown RBP18.81■□□□□ 0.6
RABGGTA-220ENST00000560998 ROCK2O75116 1388 aaKnown RBP18.81■□□□□ 0.6
RABGGTA-220ENST00000560998 SALL2Q9Y467 1007 aaPredicted RBP18.81■□□□□ 0.6
RABGGTA-220ENST00000560998 DEPDC5O75140 1603 aa18.8■□□□□ 0.6
RABGGTA-220ENST00000560998 ATP7AQ04656 1500 aa18.8■□□□□ 0.6
RABGGTA-220ENST00000560998 PAK3O75914 559 aaPredicted RBP18.79■□□□□ 0.6
RABGGTA-220ENST00000560998 E9PCH4 1651 aa18.79■□□□□ 0.6
RABGGTA-220ENST00000560998 ST20-MTHFSA0A0A6YYL1 179 aa18.79■□□□□ 0.6
RABGGTA-220ENST00000560998 RGL3Q3MIN7 710 aa18.79■□□□□ 0.6
RABGGTA-220ENST00000560998 LAMC1P11047 1609 aa18.78■□□□□ 0.6
RABGGTA-220ENST00000560998 POLR3GLQ9BT43 218 aa18.77■□□□□ 0.6
RABGGTA-220ENST00000560998 MRS2Q9HD23 443 aa18.77■□□□□ 0.6
RABGGTA-220ENST00000560998 ADGRL1O94910 1474 aa18.77■□□□□ 0.59
RABGGTA-220ENST00000560998 GPRASP1Q5JY77 1395 aa18.77■□□□□ 0.59
RABGGTA-220ENST00000560998 OSCARQ8IYS5 282 aa18.77■□□□□ 0.59
RABGGTA-220ENST00000560998 UBE2Q2Q8WVN8 375 aa18.77■□□□□ 0.59
RABGGTA-220ENST00000560998 EIF2AK4Q9P2K8 1649 aaKnown RBP18.77■□□□□ 0.59
RABGGTA-220ENST00000560998 ZBED9Q6R2W3 1325 aa18.76■□□□□ 0.59
RABGGTA-220ENST00000560998 SCAPERQ9BY12 1400 aa18.75■□□□□ 0.59
RABGGTA-220ENST00000560998 B4GALNT3Q6L9W6 998 aa18.74■□□□□ 0.59
RABGGTA-220ENST00000560998 ZBTB47Q9UFB7 747 aaPredicted RBP18.74■□□□□ 0.59
RABGGTA-220ENST00000560998 USP35Q9P2H5 1018 aa18.73■□□□□ 0.59
RABGGTA-220ENST00000560998 TRPM2O94759 1503 aa18.73■□□□□ 0.59
RABGGTA-220ENST00000560998 TET3O43151 1660 aa18.73■□□□□ 0.59
RABGGTA-220ENST00000560998 VWDEQ8N2E2 1590 aa18.73■□□□□ 0.59
RABGGTA-220ENST00000560998 PRDM15P57071 1507 aaPredicted RBP18.73■□□□□ 0.59
RABGGTA-220ENST00000560998 SPHKAPQ2M3C7 1700 aa18.72■□□□□ 0.59
RABGGTA-220ENST00000560998 NBPF1Q3BBV0 1214 aa18.72■□□□□ 0.59
RABGGTA-220ENST00000560998 PTPRTO14522 1441 aa18.71■□□□□ 0.59
RABGGTA-220ENST00000560998 CEP152O94986 1710 aa18.7■□□□□ 0.58
RABGGTA-220ENST00000560998 FAM9BQ8IZU0 186 aa18.7■□□□□ 0.58
RABGGTA-220ENST00000560998 RNF17Q9BXT8 1623 aaKnown RBP18.69■□□□□ 0.58
RABGGTA-220ENST00000560998 KANK1Q14678 1352 aa18.68■□□□□ 0.58
RABGGTA-220ENST00000560998 MROH1Q8NDA8 1641 aa18.68■□□□□ 0.58
RABGGTA-220ENST00000560998 KIDINS220Q9ULH0 1771 aa18.68■□□□□ 0.58
RABGGTA-220ENST00000560998 NPM1P06748 294 aaKnown RBP eCLIP18.68■□□□□ 0.58
RABGGTA-220ENST00000560998 CLTCL1P53675 1640 aa18.68■□□□□ 0.58
RABGGTA-220ENST00000560998 MADDQ8WXG6 1647 aa18.66■□□□□ 0.58
RABGGTA-220ENST00000560998 IL27Q8NEV9 243 aa18.66■□□□□ 0.58
RABGGTA-220ENST00000560998 CFAP74Q9C0B2 1584 aa18.65■□□□□ 0.58
RABGGTA-220ENST00000560998 KIF3BO15066 747 aa18.65■□□□□ 0.58
RABGGTA-220ENST00000560998 SMG6Q86US8 1419 aaKnown RBP18.65■□□□□ 0.58
RABGGTA-220ENST00000560998 ZNF518AQ6AHZ1 1483 aa18.64■□□□□ 0.58
RABGGTA-220ENST00000560998 COL17A1Q9UMD9 1497 aaPredicted RBP18.64■□□□□ 0.58
RABGGTA-220ENST00000560998 CCDC136Q96JN2 1154 aa18.64■□□□□ 0.57
RABGGTA-220ENST00000560998 WASHC2CQ9Y4E1 1318 aa18.64■□□□□ 0.57
RABGGTA-220ENST00000560998 TESK2Q96S53 571 aa18.62■□□□□ 0.57
RABGGTA-220ENST00000560998 KTN1Q86UP2 1357 aaKnown RBP18.62■□□□□ 0.57
RABGGTA-220ENST00000560998 CNGB1Q14028 1251 aaPredicted RBP18.62■□□□□ 0.57
RABGGTA-220ENST00000560998 CD109Q6YHK3 1445 aa18.62■□□□□ 0.57
RABGGTA-220ENST00000560998 RNF123Q5XPI4 1314 aa18.61■□□□□ 0.57
RABGGTA-220ENST00000560998 NEURL4Q96JN8 1562 aa18.6■□□□□ 0.57
RABGGTA-220ENST00000560998 STAC3Q96MF2 364 aa18.6■□□□□ 0.57
RABGGTA-220ENST00000560998 IQGAP1P46940 1657 aa18.59■□□□□ 0.57
RABGGTA-220ENST00000560998 DISP3Q9P2K9 1392 aa18.59■□□□□ 0.57
RABGGTA-220ENST00000560998 EFCAB6Q5THR3 1501 aa18.59■□□□□ 0.57
RABGGTA-220ENST00000560998 POGZQ7Z3K3 1410 aa18.59■□□□□ 0.57
RABGGTA-220ENST00000560998 RALBP1Q15311 655 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms