RNA–Protein interactions for RNA: ENST00000560941.5

LINS1-211, Transcript of lines homolog 1, humanhuman

TSL 5

Gene LINS1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1-211ENST00000560941 ARAP3Q8WWN8 1544 aa13.03□□□□□ -0.32
LINS1-211ENST00000560941 KDM4FA0A1W2PPD8 638 aa13.03□□□□□ -0.32
LINS1-211ENST00000560941 EFCAB2Q5VUJ9 269 aa13.03□□□□□ -0.32
LINS1-211ENST00000560941 SCUBE2Q9NQ36 999 aa13.03□□□□□ -0.32
LINS1-211ENST00000560941 PHLDB1Q86UU1 1377 aa13.03□□□□□ -0.32
LINS1-211ENST00000560941 MTUS2Q5JR59 1369 aa13.02□□□□□ -0.33
LINS1-211ENST00000560941 ZNF777Q9ULD5 760 aaPredicted RBP13.01□□□□□ -0.33
LINS1-211ENST00000560941 VPS8Q8N3P4 1428 aa13.01□□□□□ -0.33
LINS1-211ENST00000560941 DENND4BO75064 1496 aaPredicted RBP13□□□□□ -0.33
LINS1-211ENST00000560941 SCAPERQ9BY12 1400 aa13□□□□□ -0.33
LINS1-211ENST00000560941 ARHGAP5Q13017 1502 aa12.99□□□□□ -0.33
LINS1-211ENST00000560941 LCE2DQ5TA82 110 aaPredicted RBP12.99□□□□□ -0.33
LINS1-211ENST00000560941 ADGRL1O94910 1474 aa12.98□□□□□ -0.33
LINS1-211ENST00000560941 KANK4Q5T7N3 995 aaPredicted RBP12.98□□□□□ -0.33
LINS1-211ENST00000560941 IER5LQ5T953 404 aa12.98□□□□□ -0.33
LINS1-211ENST00000560941 PCDHB13Q9Y5F0 798 aa12.98□□□□□ -0.33
LINS1-211ENST00000560941 AFAP1Q8N556 730 aa12.97□□□□□ -0.33
LINS1-211ENST00000560941 FRMPD1Q5SYB0 1578 aa12.97□□□□□ -0.33
LINS1-211ENST00000560941 MYO5CQ9NQX4 1742 aa12.96□□□□□ -0.33
LINS1-211ENST00000560941 COLQQ9Y215 455 aaPredicted RBP12.96□□□□□ -0.33
LINS1-211ENST00000560941 GPATCH8Q9UKJ3 1502 aaKnown RBP12.95□□□□□ -0.34
LINS1-211ENST00000560941 FKBP8Q14318 412 aa12.95□□□□□ -0.34
LINS1-211ENST00000560941 PCDH10Q9P2E7 1040 aa12.95□□□□□ -0.34
LINS1-211ENST00000560941 CFDP1Q9UEE9 299 aaPredicted RBP12.95□□□□□ -0.34
LINS1-211ENST00000560941 MYT1LQ9UL68 1186 aa12.95□□□□□ -0.34
LINS1-211ENST00000560941 CCNB3Q8WWL7 1395 aa12.94□□□□□ -0.34
LINS1-211ENST00000560941 CFAP74Q9C0B2 1584 aa12.94□□□□□ -0.34
LINS1-211ENST00000560941 CDC42BPBQ9Y5S2 1711 aa12.94□□□□□ -0.34
LINS1-211ENST00000560941 HNRNPMP52272 730 aaKnown RBP eCLIP12.94□□□□□ -0.34
LINS1-211ENST00000560941 FAM212AQ96EL1 285 aa12.94□□□□□ -0.34
LINS1-211ENST00000560941 TRIM35Q9UPQ4 493 aa12.94□□□□□ -0.34
LINS1-211ENST00000560941 ARID4BQ4LE39 1312 aaPredicted RBP12.93□□□□□ -0.34
LINS1-211ENST00000560941 ZNF644Q9H582 1327 aaPredicted RBP12.93□□□□□ -0.34
LINS1-211ENST00000560941 YEATS2Q9ULM3 1422 aa12.93□□□□□ -0.34
LINS1-211ENST00000560941 TIAM1Q13009 1591 aa12.92□□□□□ -0.34
LINS1-211ENST00000560941 RICTORQ6R327 1708 aa12.92□□□□□ -0.34
LINS1-211ENST00000560941 POGZQ7Z3K3 1410 aa12.92□□□□□ -0.34
LINS1-211ENST00000560941 IFNL1Q8IU54 200 aa12.92□□□□□ -0.34
LINS1-211ENST00000560941 EHBP1L1Q8N3D4 1523 aa12.92□□□□□ -0.34
LINS1-211ENST00000560941 ARHGEF12Q9NZN5 1544 aa12.92□□□□□ -0.34
LINS1-211ENST00000560941 CDC42BPAQ5VT25 1732 aa12.91□□□□□ -0.34
LINS1-211ENST00000560941 TRAPPC8Q9Y2L5 1435 aa12.91□□□□□ -0.34
LINS1-211ENST00000560941 PREX2Q70Z35 1606 aa12.91□□□□□ -0.34
LINS1-211ENST00000560941 SEC24BO95487 1268 aa12.9□□□□□ -0.34
LINS1-211ENST00000560941 NCOA2Q15596 1464 aa12.9□□□□□ -0.34
LINS1-211ENST00000560941 LRRC9Q6ZRR7 1453 aa12.9□□□□□ -0.34
LINS1-211ENST00000560941 MLECQ14165 292 aa12.89□□□□□ -0.35
LINS1-211ENST00000560941 SAMD9LQ8IVG5 1584 aa12.87□□□□□ -0.35
LINS1-211ENST00000560941 ABCC1P33527 1531 aa12.87□□□□□ -0.35
LINS1-211ENST00000560941 ZFYVE16Q7Z3T8 1539 aa12.87□□□□□ -0.35
LINS1-211ENST00000560941 ZNF518AQ6AHZ1 1483 aa12.86□□□□□ -0.35
LINS1-211ENST00000560941 ZMYM4Q5VZL5 1548 aa12.86□□□□□ -0.35
LINS1-211ENST00000560941 SYCP2Q9BX26 1530 aa12.85□□□□□ -0.35
LINS1-211ENST00000560941 PPARGC1BQ86YN6 1023 aaKnown RBP12.85□□□□□ -0.35
LINS1-211ENST00000560941 ARHGEF40Q8TER5 1519 aa12.84□□□□□ -0.35
LINS1-211ENST00000560941 SUPT6HQ7KZ85 1726 aaKnown RBP12.84□□□□□ -0.35
LINS1-211ENST00000560941 SPAG9O60271 1321 aaKnown RBP12.84□□□□□ -0.35
LINS1-211ENST00000560941 MAGI2Q86UL8 1455 aa12.84□□□□□ -0.35
LINS1-211ENST00000560941 MAP3K1Q13233 1512 aa12.83□□□□□ -0.35
LINS1-211ENST00000560941 FAM163AQ96GL9 167 aaPredicted RBP12.83□□□□□ -0.36
LINS1-211ENST00000560941 TMEM106CQ9BVX2 250 aa12.83□□□□□ -0.36
LINS1-211ENST00000560941 ATP10AO60312 1499 aa12.83□□□□□ -0.36
LINS1-211ENST00000560941 ITSN2Q9NZM3 1697 aa12.83□□□□□ -0.36
LINS1-211ENST00000560941 SIGLEC1Q9BZZ2 1709 aa12.82□□□□□ -0.36
LINS1-211ENST00000560941 KDM5CP41229 1560 aa12.81□□□□□ -0.36
LINS1-211ENST00000560941 KIAA1107Q9UPP5 1409 aa12.81□□□□□ -0.36
LINS1-211ENST00000560941 C9orf84Q5VXU9 1444 aa12.8□□□□□ -0.36
LINS1-211ENST00000560941 MLH3Q9UHC1 1453 aa12.8□□□□□ -0.36
LINS1-211ENST00000560941 PLEKHH2Q8IVE3 1493 aa12.79□□□□□ -0.36
LINS1-211ENST00000560941 MBD5Q9P267 1494 aa12.79□□□□□ -0.36
LINS1-211ENST00000560941 HECW2Q9P2P5 1572 aa12.79□□□□□ -0.36
LINS1-211ENST00000560941 CAMSAP2Q08AD1 1489 aa12.78□□□□□ -0.36
LINS1-211ENST00000560941 IRX5P78411 483 aaPredicted RBP12.78□□□□□ -0.36
LINS1-211ENST00000560941 FBXO3Q9UK99 471 aa12.78□□□□□ -0.36
LINS1-211ENST00000560941 DIP2CQ9Y2E4 1556 aa12.77□□□□□ -0.36
LINS1-211ENST00000560941 ABCA6Q8N139 1617 aa12.77□□□□□ -0.36
LINS1-211ENST00000560941 BCORL1Q5H9F3 1711 aa12.77□□□□□ -0.36
LINS1-211ENST00000560941 MYOM3Q5VTT5 1437 aa12.77□□□□□ -0.37
LINS1-211ENST00000560941 ADAMTSL3P82987 1691 aa12.77□□□□□ -0.37
LINS1-211ENST00000560941 KIDINS220Q9ULH0 1771 aa12.76□□□□□ -0.37
LINS1-211ENST00000560941 MADDQ8WXG6 1647 aa12.76□□□□□ -0.37
LINS1-211ENST00000560941 PTPRMP28827 1452 aa12.75□□□□□ -0.37
LINS1-211ENST00000560941 TSPY4P0CV99 314 aa12.74□□□□□ -0.37
LINS1-211ENST00000560941 TSPY10P0CW01 314 aa12.74□□□□□ -0.37
LINS1-211ENST00000560941 PLCG2P16885 1265 aa12.74□□□□□ -0.37
LINS1-211ENST00000560941 CEBPAP49715 358 aaPredicted RBP12.74□□□□□ -0.37
LINS1-211ENST00000560941 ATP7AQ04656 1500 aa12.73□□□□□ -0.37
LINS1-211ENST00000560941 RSPH4AQ5TD94 716 aa12.73□□□□□ -0.37
LINS1-211ENST00000560941 CCDC141Q6ZP82 1450 aa12.72□□□□□ -0.37
LINS1-211ENST00000560941 MIA2Q96PC5 1412 aa12.72□□□□□ -0.37
LINS1-211ENST00000560941 PYGBP11216 843 aa12.72□□□□□ -0.37
LINS1-211ENST00000560941 DCAF8Q5TAQ9 597 aa12.72□□□□□ -0.37
LINS1-211ENST00000560941 GGT6Q6P531 493 aa12.72□□□□□ -0.37
LINS1-211ENST00000560941 RIMS1Q86UR5 1692 aaKnown RBP12.71□□□□□ -0.37
LINS1-211ENST00000560941 FAM50AQ14320 339 aaKnown RBP12.71□□□□□ -0.37
LINS1-211ENST00000560941 A2MP01023 1474 aa12.71□□□□□ -0.38
LINS1-211ENST00000560941 INO80Q9ULG1 1556 aaPredicted RBP12.7□□□□□ -0.38
LINS1-211ENST00000560941 SLAIN1Q8ND83 568 aa12.7□□□□□ -0.38
LINS1-211ENST00000560941 FGD6Q6ZV73 1430 aa12.7□□□□□ -0.38
LINS1-211ENST00000560941 ESF1Q9H501 851 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms