RNA–Protein interactions for RNA: ENST00000560920.6

TRIP4-211, Transcript of thyroid hormone receptor interactor 4, humanhuman

TSL 3

Gene TRIP4, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-211ENST00000560920 KIF3BO15066 747 aa30.02■■■□□ 2.4
TRIP4-211ENST00000560920 TNRQ92752 1358 aa29.97■■■□□ 2.39
TRIP4-211ENST00000560920 CCDC141Q6ZP82 1450 aa29.95■■■□□ 2.39
TRIP4-211ENST00000560920 RSPH4AQ5TD94 716 aa29.94■■■□□ 2.38
TRIP4-211ENST00000560920 PZPP20742 1482 aa29.93■■■□□ 2.38
TRIP4-211ENST00000560920 NCOA2Q15596 1464 aa29.93■■■□□ 2.38
TRIP4-211ENST00000560920 CAMSAP2Q08AD1 1489 aa29.93■■■□□ 2.38
TRIP4-211ENST00000560920 WASHC2CQ9Y4E1 1318 aa29.92■■■□□ 2.38
TRIP4-211ENST00000560920 KDM5DQ9BY66 1539 aa29.91■■■□□ 2.38
TRIP4-211ENST00000560920 NEURL4Q96JN8 1562 aa29.91■■■□□ 2.38
TRIP4-211ENST00000560920 FAM135AQ9P2D6 1515 aa29.89■■■□□ 2.38
TRIP4-211ENST00000560920 POLR1AO95602 1720 aaPredicted RBP29.88■■■□□ 2.37
TRIP4-211ENST00000560920 MIA2Q96PC5 1412 aa29.87■■■□□ 2.37
TRIP4-211ENST00000560920 SHANK2Q9UPX8 1470 aa29.87■■■□□ 2.37
TRIP4-211ENST00000560920 ANKLE2Q86XL3 938 aa29.86■■■□□ 2.37
TRIP4-211ENST00000560920 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.86■■■□□ 2.37
TRIP4-211ENST00000560920 THEMISQ8N1K5 641 aaPredicted RBP29.84■■■□□ 2.37
TRIP4-211ENST00000560920 CPS1P31327 1500 aa29.84■■■□□ 2.37
TRIP4-211ENST00000560920 HSPA1LP34931 641 aa29.83■■■□□ 2.37
TRIP4-211ENST00000560920 ARHGEF5Q12774 1597 aa29.82■■■□□ 2.36
TRIP4-211ENST00000560920 TSPY4P0CV99 314 aa29.82■■■□□ 2.36
TRIP4-211ENST00000560920 TSPY10P0CW01 314 aa29.82■■■□□ 2.36
TRIP4-211ENST00000560920 PIP4K2BP78356 416 aa29.82■■■□□ 2.36
TRIP4-211ENST00000560920 TOM1O60784 492 aa29.81■■■□□ 2.36
TRIP4-211ENST00000560920 NLRP1Q9C000 1473 aa29.8■■■□□ 2.36
TRIP4-211ENST00000560920 SCAF1Q9H7N4 1312 aaKnown RBP29.8■■■□□ 2.36
TRIP4-211ENST00000560920 VWDEQ8N2E2 1590 aa29.78■■■□□ 2.36
TRIP4-211ENST00000560920 UGGT1Q9NYU2 1555 aa29.77■■■□□ 2.36
TRIP4-211ENST00000560920 MED14O60244 1454 aa29.77■■■□□ 2.36
TRIP4-211ENST00000560920 NPHP4O75161 1426 aaPredicted RBP29.75■■■□□ 2.35
TRIP4-211ENST00000560920 DEPDC5O75140 1603 aa29.73■■■□□ 2.35
TRIP4-211ENST00000560920 RNF17Q9BXT8 1623 aaKnown RBP29.71■■■□□ 2.35
TRIP4-211ENST00000560920 ABCC3O15438 1527 aa29.71■■■□□ 2.35
TRIP4-211ENST00000560920 LRRC9Q6ZRR7 1453 aa29.7■■■□□ 2.35
TRIP4-211ENST00000560920 ALKQ9UM73 1620 aa29.68■■■□□ 2.34
TRIP4-211ENST00000560920 MED1Q15648 1581 aaPredicted RBP29.68■■■□□ 2.34
TRIP4-211ENST00000560920 MAST1Q9Y2H9 1570 aa29.68■■■□□ 2.34
TRIP4-211ENST00000560920 IQGAP1P46940 1657 aa29.65■■■□□ 2.34
TRIP4-211ENST00000560920 ERVK-7P63135 1459 aa29.64■■■□□ 2.34
TRIP4-211ENST00000560920 ZC3H13Q5T200 1668 aaKnown RBP29.63■■■□□ 2.33
TRIP4-211ENST00000560920 KANK4Q5T7N3 995 aaPredicted RBP29.63■■■□□ 2.33
TRIP4-211ENST00000560920 VPS8Q8N3P4 1428 aa29.62■■■□□ 2.33
TRIP4-211ENST00000560920 MROH1Q8NDA8 1641 aa29.62■■■□□ 2.33
TRIP4-211ENST00000560920 STRCP1A6NGW2 1772 aa29.62■■■□□ 2.33
TRIP4-211ENST00000560920 EIF2AK4Q9P2K8 1649 aaKnown RBP29.61■■■□□ 2.33
TRIP4-211ENST00000560920 LRRC7Q96NW7 1537 aa29.6■■■□□ 2.33
TRIP4-211ENST00000560920 LOC105371045A0A1W2PR82 267 aa29.57■■■□□ 2.32
TRIP4-211ENST00000560920 CFAP65Q6ZU64 1925 aaKnown RBP29.56■■■□□ 2.32
TRIP4-211ENST00000560920 MYOM3Q5VTT5 1437 aa29.55■■■□□ 2.32
TRIP4-211ENST00000560920 CEP152O94986 1710 aa29.54■■■□□ 2.32
TRIP4-211ENST00000560920 UBR1Q8IWV7 1749 aa29.54■■■□□ 2.32
TRIP4-211ENST00000560920 MAP3K1Q13233 1512 aa29.53■■■□□ 2.32
TRIP4-211ENST00000560920 DUOX2Q9NRD8 1548 aa29.52■■■□□ 2.32
TRIP4-211ENST00000560920 LTKP29376 864 aa29.52■■■□□ 2.32
TRIP4-211ENST00000560920 SCAF11Q99590 1463 aaKnown RBP29.49■■■□□ 2.31
TRIP4-211ENST00000560920 SENP3Q9H4L4 574 aaPredicted RBP29.49■■■□□ 2.31
TRIP4-211ENST00000560920 SYNMO15061 1565 aa29.48■■■□□ 2.31
TRIP4-211ENST00000560920 TXNDC2Q86VQ3 553 aa29.48■■■□□ 2.31
TRIP4-211ENST00000560920 ARHGAP23Q9P227 1491 aa29.48■■■□□ 2.31
TRIP4-211ENST00000560920 ARHGAP31Q2M1Z3 1444 aa29.47■■■□□ 2.31
TRIP4-211ENST00000560920 PHF23Q9BUL5 403 aaPredicted RBP29.46■■■□□ 2.31
TRIP4-211ENST00000560920 SLIT1O75093 1534 aa29.45■■■□□ 2.31
TRIP4-211ENST00000560920 KIF15Q9NS87 1388 aa29.45■■■□□ 2.31
TRIP4-211ENST00000560920 RRP7BPQ9NSQ0 103 aa29.44■■■□□ 2.3
TRIP4-211ENST00000560920 ABCC5O15440 1437 aa29.44■■■□□ 2.3
TRIP4-211ENST00000560920 PRDM15P57071 1507 aaPredicted RBP29.43■■■□□ 2.3
TRIP4-211ENST00000560920 ERBINQ96RT1 1412 aa29.41■■■□□ 2.3
TRIP4-211ENST00000560920 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.4■■■□□ 2.35e-7■□□□□ 9.5
TRIP4-211ENST00000560920 EID1Q9Y6B2 187 aa29.39■■■□□ 2.3
TRIP4-211ENST00000560920 XIRP1Q702N8 1843 aaKnown RBP29.36■■■□□ 2.29
TRIP4-211ENST00000560920 CROCC2H7BZ55 1655 aa29.36■■■□□ 2.29
TRIP4-211ENST00000560920 TMEM2Q9UHN6 1383 aa29.36■■■□□ 2.29
TRIP4-211ENST00000560920 PIK3C2BO00750 1634 aa29.35■■■□□ 2.29
TRIP4-211ENST00000560920 PTPN23Q9H3S7 1636 aa29.34■■■□□ 2.29
TRIP4-211ENST00000560920 DAPK1P53355 1430 aa29.32■■■□□ 2.28
TRIP4-211ENST00000560920 IDI1Q13907 227 aa29.32■■■□□ 2.28
TRIP4-211ENST00000560920 KANK1Q14678 1352 aa29.3■■■□□ 2.28
TRIP4-211ENST00000560920 RGS17Q9UGC6 210 aaPredicted RBP29.3■■■□□ 2.28
TRIP4-211ENST00000560920 STAG3Q9UJ98 1225 aa29.3■■■□□ 2.28
TRIP4-211ENST00000560920 CHIC2Q9UKJ5 165 aa29.27■■■□□ 2.28
TRIP4-211ENST00000560920 LMTK2Q8IWU2 1503 aa29.26■■■□□ 2.27
TRIP4-211ENST00000560920 FAM135BQ49AJ0 1406 aa29.26■■■□□ 2.27
TRIP4-211ENST00000560920 EFCAB6Q5THR3 1501 aa29.25■■■□□ 2.27
TRIP4-211ENST00000560920 FGD6Q6ZV73 1430 aa29.25■■■□□ 2.27
TRIP4-211ENST00000560920 TMEM94Q12767 1356 aa29.25■■■□□ 2.27
TRIP4-211ENST00000560920 KDM5AP29375 1690 aaKnown RBP29.25■■■□□ 2.27
TRIP4-211ENST00000560920 KCNA6P17658 529 aa29.24■■■□□ 2.27
TRIP4-211ENST00000560920 APLP2Q06481 763 aa29.23■■■□□ 2.27
TRIP4-211ENST00000560920 SLC26A8Q96RN1 970 aa29.23■■■□□ 2.27
TRIP4-211ENST00000560920 TET3O43151 1660 aa29.23■■■□□ 2.27
TRIP4-211ENST00000560920 ANKRD30AQ9BXX3 1397 aa29.23■■■□□ 2.27
TRIP4-211ENST00000560920 NOS1P29475 1434 aa29.2■■■□□ 2.27
TRIP4-211ENST00000560920 PROSER2Q86WR7 435 aaPredicted RBP29.19■■■□□ 2.26
TRIP4-211ENST00000560920 RBM33Q96EV2 1170 aaKnown RBP29.19■■■□□ 2.26
TRIP4-211ENST00000560920 SLC52A1Q9NWF4 448 aa29.14■■■□□ 2.26
TRIP4-211ENST00000560920 ADGRB3O60242 1522 aa29.13■■■□□ 2.25
TRIP4-211ENST00000560920 ROBO1Q9Y6N7 1651 aa29.11■■■□□ 2.25
TRIP4-211ENST00000560920 POTEAQ6S8J7 498 aa29.09■■■□□ 2.25
TRIP4-211ENST00000560920 ADGRL2O95490 1459 aa29.09■■■□□ 2.25
TRIP4-211ENST00000560920 NWD1Q149M9 1564 aa29.09■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms