RNA–Protein interactions for RNA: ENST00000560912.5

CRNDE-210, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 5 BASIC

Gene CRNDE, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-210ENST00000560912 NCOA2Q15596 1464 aa30.69■■■□□ 2.5
CRNDE-210ENST00000560912 KDM5DQ9BY66 1539 aa30.68■■■□□ 2.5
CRNDE-210ENST00000560912 ILDR2Q71H61 639 aa30.68■■■□□ 2.5
CRNDE-210ENST00000560912 ARHGEF5Q12774 1597 aa30.65■■■□□ 2.5
CRNDE-210ENST00000560912 NEURL4Q96JN8 1562 aa30.64■■■□□ 2.5
CRNDE-210ENST00000560912 PZPP20742 1482 aa30.63■■■□□ 2.49
CRNDE-210ENST00000560912 TNRQ92752 1358 aa30.57■■■□□ 2.48
CRNDE-210ENST00000560912 RNF17Q9BXT8 1623 aaKnown RBP30.55■■■□□ 2.48
CRNDE-210ENST00000560912 KIF3BO15066 747 aa30.55■■■□□ 2.48
CRNDE-210ENST00000560912 SOCS7O14512 581 aa30.54■■■□□ 2.48
CRNDE-210ENST00000560912 RSPH4AQ5TD94 716 aa30.53■■■□□ 2.48
CRNDE-210ENST00000560912 ZC3H13Q5T200 1668 aaKnown RBP30.52■■■□□ 2.48
CRNDE-210ENST00000560912 UBAP1LF5GYI3 381 aa30.52■■■□□ 2.48
CRNDE-210ENST00000560912 MAST1Q9Y2H9 1570 aa30.52■■■□□ 2.48
CRNDE-210ENST00000560912 FBXO31Q5XUX0 539 aaPredicted RBP30.5■■■□□ 2.47
CRNDE-210ENST00000560912 CPS1P31327 1500 aa30.5■■■□□ 2.47
CRNDE-210ENST00000560912 DEPDC5O75140 1603 aa30.49■■■□□ 2.47
CRNDE-210ENST00000560912 NLRP1Q9C000 1473 aa30.49■■■□□ 2.47
CRNDE-210ENST00000560912 EIF2AK4Q9P2K8 1649 aaKnown RBP30.48■■■□□ 2.47
CRNDE-210ENST00000560912 LRRC9Q6ZRR7 1453 aa30.47■■■□□ 2.47
CRNDE-210ENST00000560912 WASHC2CQ9Y4E1 1318 aa30.46■■■□□ 2.47
CRNDE-210ENST00000560912 VWDEQ8N2E2 1590 aa30.45■■■□□ 2.47
CRNDE-210ENST00000560912 UGGT1Q9NYU2 1555 aa30.45■■■□□ 2.47
CRNDE-210ENST00000560912 MIA2Q96PC5 1412 aa30.45■■■□□ 2.46
CRNDE-210ENST00000560912 SHANK2Q9UPX8 1470 aa30.44■■■□□ 2.46
CRNDE-210ENST00000560912 ABCC3O15438 1527 aa30.44■■■□□ 2.46
CRNDE-210ENST00000560912 MROH1Q8NDA8 1641 aa30.44■■■□□ 2.46
CRNDE-210ENST00000560912 VPS8Q8N3P4 1428 aa30.43■■■□□ 2.46
CRNDE-210ENST00000560912 MED14O60244 1454 aa30.43■■■□□ 2.46
CRNDE-210ENST00000560912 IQGAP1P46940 1657 aa30.41■■■□□ 2.46
CRNDE-210ENST00000560912 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.41■■■□□ 2.46
CRNDE-210ENST00000560912 CEP152O94986 1710 aa30.39■■■□□ 2.46
CRNDE-210ENST00000560912 MAP3K1Q13233 1512 aa30.37■■■□□ 2.45
CRNDE-210ENST00000560912 TSPY4P0CV99 314 aa30.37■■■□□ 2.45
CRNDE-210ENST00000560912 TSPY10P0CW01 314 aa30.37■■■□□ 2.45
CRNDE-210ENST00000560912 NPHP4O75161 1426 aaPredicted RBP30.36■■■□□ 2.45
CRNDE-210ENST00000560912 STRCP1A6NGW2 1772 aa30.35■■■□□ 2.45
CRNDE-210ENST00000560912 ALKQ9UM73 1620 aa30.34■■■□□ 2.45
CRNDE-210ENST00000560912 ERVK-7P63135 1459 aa30.34■■■□□ 2.45
CRNDE-210ENST00000560912 ANKLE2Q86XL3 938 aa30.34■■■□□ 2.45
CRNDE-210ENST00000560912 THEMISQ8N1K5 641 aaPredicted RBP30.34■■■□□ 2.45
CRNDE-210ENST00000560912 UBR1Q8IWV7 1749 aa30.32■■■□□ 2.44
CRNDE-210ENST00000560912 CROCC2H7BZ55 1655 aa30.32■■■□□ 2.44
CRNDE-210ENST00000560912 CFAP65Q6ZU64 1925 aaKnown RBP30.32■■■□□ 2.44
CRNDE-210ENST00000560912 MYOM3Q5VTT5 1437 aa30.3■■■□□ 2.44
CRNDE-210ENST00000560912 MED1Q15648 1581 aaPredicted RBP30.3■■■□□ 2.44
CRNDE-210ENST00000560912 SYNMO15061 1565 aa30.29■■■□□ 2.44
CRNDE-210ENST00000560912 DUOX2Q9NRD8 1548 aa30.28■■■□□ 2.44
CRNDE-210ENST00000560912 PRDM15P57071 1507 aaPredicted RBP30.27■■■□□ 2.44
CRNDE-210ENST00000560912 TOM1O60784 492 aa30.25■■■□□ 2.43
CRNDE-210ENST00000560912 HSPA1LP34931 641 aa30.25■■■□□ 2.43
CRNDE-210ENST00000560912 KANK4Q5T7N3 995 aaPredicted RBP30.23■■■□□ 2.43
CRNDE-210ENST00000560912 SCAF1Q9H7N4 1312 aaKnown RBP30.22■■■□□ 2.43
CRNDE-210ENST00000560912 PIP4K2BP78356 416 aa30.21■■■□□ 2.43
CRNDE-210ENST00000560912 LRRC7Q96NW7 1537 aa30.19■■■□□ 2.42
CRNDE-210ENST00000560912 PTPN23Q9H3S7 1636 aa30.17■■■□□ 2.42
CRNDE-210ENST00000560912 SLIT1O75093 1534 aa30.17■■■□□ 2.42
CRNDE-210ENST00000560912 ARHGAP31Q2M1Z3 1444 aa30.16■■■□□ 2.42
CRNDE-210ENST00000560912 ERBINQ96RT1 1412 aa30.16■■■□□ 2.42
CRNDE-210ENST00000560912 ARHGAP23Q9P227 1491 aa30.16■■■□□ 2.42
CRNDE-210ENST00000560912 SCAF11Q99590 1463 aaKnown RBP30.15■■■□□ 2.42
CRNDE-210ENST00000560912 XIRP1Q702N8 1843 aaKnown RBP30.13■■■□□ 2.41
CRNDE-210ENST00000560912 LOC105371045A0A1W2PR82 267 aa30.13■■■□□ 2.41
CRNDE-210ENST00000560912 KIF15Q9NS87 1388 aa30.13■■■□□ 2.41
CRNDE-210ENST00000560912 ABCC5O15440 1437 aa30.12■■■□□ 2.41
CRNDE-210ENST00000560912 PIK3C2BO00750 1634 aa30.11■■■□□ 2.41
CRNDE-210ENST00000560912 KDM5AP29375 1690 aaKnown RBP30.1■■■□□ 2.41
CRNDE-210ENST00000560912 DAPK1P53355 1430 aa30.06■■■□□ 2.4
CRNDE-210ENST00000560912 LMTK2Q8IWU2 1503 aa30.02■■■□□ 2.4
CRNDE-210ENST00000560912 LTKP29376 864 aa30.01■■■□□ 2.39
CRNDE-210ENST00000560912 FGD6Q6ZV73 1430 aa30■■■□□ 2.39
CRNDE-210ENST00000560912 RRP7BPQ9NSQ0 103 aa29.98■■■□□ 2.39
CRNDE-210ENST00000560912 EFCAB6Q5THR3 1501 aa29.96■■■□□ 2.39
CRNDE-210ENST00000560912 TMEM2Q9UHN6 1383 aa29.95■■■□□ 2.39
CRNDE-210ENST00000560912 TXNDC2Q86VQ3 553 aa29.95■■■□□ 2.39
CRNDE-210ENST00000560912 KANK1Q14678 1352 aa29.93■■■□□ 2.38
CRNDE-210ENST00000560912 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.9■■■□□ 2.38
CRNDE-210ENST00000560912 ADGRB3O60242 1522 aa29.9■■■□□ 2.38
CRNDE-210ENST00000560912 ANKRD30AQ9BXX3 1397 aa29.9■■■□□ 2.38
CRNDE-210ENST00000560912 TET3O43151 1660 aa29.89■■■□□ 2.38
CRNDE-210ENST00000560912 EID1Q9Y6B2 187 aa29.89■■■□□ 2.38
CRNDE-210ENST00000560912 NOS1P29475 1434 aa29.88■■■□□ 2.37
CRNDE-210ENST00000560912 ADGRL2O95490 1459 aa29.88■■■□□ 2.37
CRNDE-210ENST00000560912 PHF23Q9BUL5 403 aaPredicted RBP29.87■■■□□ 2.37
CRNDE-210ENST00000560912 NWD1Q149M9 1564 aa29.86■■■□□ 2.37
CRNDE-210ENST00000560912 APLP2Q06481 763 aa29.84■■■□□ 2.37
CRNDE-210ENST00000560912 MYO5BQ9ULV0 1848 aa29.84■■■□□ 2.37
CRNDE-210ENST00000560912 SENP3Q9H4L4 574 aaPredicted RBP29.83■■■□□ 2.37
CRNDE-210ENST00000560912 IDI1Q13907 227 aa29.82■■■□□ 2.36
CRNDE-210ENST00000560912 STAG3Q9UJ98 1225 aa29.8■■■□□ 2.36
CRNDE-210ENST00000560912 CHIC2Q9UKJ5 165 aa29.8■■■□□ 2.36
CRNDE-210ENST00000560912 FAM135BQ49AJ0 1406 aa29.79■■■□□ 2.36
CRNDE-210ENST00000560912 ROBO1Q9Y6N7 1651 aa29.79■■■□□ 2.36
CRNDE-210ENST00000560912 NKTRP30414 1462 aaKnown RBP29.79■■■□□ 2.36
CRNDE-210ENST00000560912 TMEM94Q12767 1356 aa29.78■■■□□ 2.36
CRNDE-210ENST00000560912 RPRD2Q5VT52 1461 aaKnown RBP29.78■■■□□ 2.36
CRNDE-210ENST00000560912 GCC2Q8IWJ2 1684 aa29.78■■■□□ 2.36
CRNDE-210ENST00000560912 KCNA6P17658 529 aa29.74■■■□□ 2.35
CRNDE-210ENST00000560912 CHD2O14647 1828 aaKnown RBP29.73■■■□□ 2.35
CRNDE-210ENST00000560912 UNC13BO14795 1591 aa29.72■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms