RNA–Protein interactions for RNA: ENST00000560631.1

RNF31-222, Transcript of ring finger protein 31, human

TSL 2

Gene RNF31, Length 320 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-222	ENST00000560631	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	12.4	□□□□□ -0.42
RNF31-222	ENST00000560631	MYCN	P04198	464 aa	Predicted RBP	12.39	□□□□□ -0.43
RNF31-222	ENST00000560631	DNMT1	P26358	1616 aa	Known RBP	12.39	□□□□□ -0.43
RNF31-222	ENST00000560631	SHANK2	Q9UPX8	1470 aa		12.39	□□□□□ -0.43
RNF31-222	ENST00000560631	CROCC2	H7BZ55	1655 aa		12.38	□□□□□ -0.43
RNF31-222	ENST00000560631	ABCC5	O15440	1437 aa		12.38	□□□□□ -0.43
RNF31-222	ENST00000560631	PLXNC1	O60486	1568 aa		12.38	□□□□□ -0.43
RNF31-222	ENST00000560631	RBM42	Q9BTD8	480 aa	Known RBP	12.37	□□□□□ -0.43
RNF31-222	ENST00000560631	DHX29	Q7Z478	1369 aa	Known RBP	12.37	□□□□□ -0.43
RNF31-222	ENST00000560631	A2M	P01023	1474 aa		12.37	□□□□□ -0.43
RNF31-222	ENST00000560631	DAPK1	P53355	1430 aa		12.37	□□□□□ -0.43
RNF31-222	ENST00000560631	ARID4B	Q4LE39	1312 aa	Predicted RBP	12.37	□□□□□ -0.43
RNF31-222	ENST00000560631	RRBP1	Q9P2E9	1410 aa	Known RBP	12.36	□□□□□ -0.43
RNF31-222	ENST00000560631	PPARGC1B	Q86YN6	1023 aa	Known RBP	12.35	□□□□□ -0.43
RNF31-222	ENST00000560631	SETD1B	Q9UPS6	1966 aa	Known RBP	12.34	□□□□□ -0.43
RNF31-222	ENST00000560631	FAM50A	Q14320	339 aa	Known RBP	12.33	□□□□□ -0.44
RNF31-222	ENST00000560631	ADGRL2	O95490	1459 aa		12.33	□□□□□ -0.44
RNF31-222	ENST00000560631	FER1L4	A9Z1Z3	1794 aa		12.32	□□□□□ -0.44
RNF31-222	ENST00000560631	MADD	Q8WXG6	1647 aa		12.32	□□□□□ -0.44
RNF31-222	ENST00000560631	NCOA1	Q15788	1441 aa		12.31	□□□□□ -0.44
RNF31-222	ENST00000560631	DUOX2	Q9NRD8	1548 aa		12.31	□□□□□ -0.44
RNF31-222	ENST00000560631	ANKRD30A	Q9BXX3	1397 aa		12.3	□□□□□ -0.44
RNF31-222	ENST00000560631	EIF2AK4	Q9P2K8	1649 aa	Known RBP	12.29	□□□□□ -0.44
RNF31-222	ENST00000560631	PTPRM	P28827	1452 aa		12.29	□□□□□ -0.44
RNF31-222	ENST00000560631	MLEC	Q14165	292 aa		12.29	□□□□□ -0.44
RNF31-222	ENST00000560631	SLC4A1AP	Q9BWU0	796 aa	Known RBP	12.29	□□□□□ -0.44
RNF31-222	ENST00000560631	ROCK1	Q13464	1354 aa		12.29	□□□□□ -0.44
RNF31-222	ENST00000560631	KIF15	Q9NS87	1388 aa		12.29	□□□□□ -0.44
RNF31-222	ENST00000560631	RIMS1	Q86UR5	1692 aa	Known RBP	12.29	□□□□□ -0.44
RNF31-222	ENST00000560631	PTPRK	Q15262	1439 aa		12.28	□□□□□ -0.44
RNF31-222	ENST00000560631	CNTLN	Q9NXG0	1405 aa		12.28	□□□□□ -0.44
RNF31-222	ENST00000560631	FAM135A	Q9P2D6	1515 aa		12.28	□□□□□ -0.44
RNF31-222	ENST00000560631	MROH2A	A6NES4	1674 aa		12.27	□□□□□ -0.45
RNF31-222	ENST00000560631	KIF3B	O15066	747 aa		12.27	□□□□□ -0.45
RNF31-222	ENST00000560631	ERBIN	Q96RT1	1412 aa		12.27	□□□□□ -0.45
RNF31-222	ENST00000560631	RNF17	Q9BXT8	1623 aa	Known RBP	12.26	□□□□□ -0.45
RNF31-222	ENST00000560631	RRP7BP	Q9NSQ0	103 aa		12.26	□□□□□ -0.45
RNF31-222	ENST00000560631	CHIC2	Q9UKJ5	165 aa		12.26	□□□□□ -0.45
RNF31-222	ENST00000560631	GGT6	Q6P531	493 aa		12.25	□□□□□ -0.45
RNF31-222	ENST00000560631	POLA2	Q14181	598 aa		12.24	□□□□□ -0.45
RNF31-222	ENST00000560631	C3	P01024	1663 aa		12.23	□□□□□ -0.45
RNF31-222	ENST00000560631	KDM5D	Q9BY66	1539 aa		12.23	□□□□□ -0.45
RNF31-222	ENST00000560631	ESF1	Q9H501	851 aa	Known RBP	12.23	□□□□□ -0.45
RNF31-222	ENST00000560631	DEPDC5	O75140	1603 aa		12.22	□□□□□ -0.45
RNF31-222	ENST00000560631	MROH1	Q8NDA8	1641 aa		12.22	□□□□□ -0.45
RNF31-222	ENST00000560631	ZMYM3	Q14202	1370 aa		12.22	□□□□□ -0.45
RNF31-222	ENST00000560631	ANKRD50	Q9ULJ7	1429 aa		12.21	□□□□□ -0.45
RNF31-222	ENST00000560631	CHRDL2	Q6WN34	429 aa		12.21	□□□□□ -0.45
RNF31-222	ENST00000560631	FOXD4L1	Q9NU39	408 aa		12.21	□□□□□ -0.45
RNF31-222	ENST00000560631	CLTC	Q00610	1675 aa	Known RBP	12.21	□□□□□ -0.45
RNF31-222	ENST00000560631	ZC3H13	Q5T200	1668 aa	Known RBP	12.2	□□□□□ -0.46
RNF31-222	ENST00000560631	PRDM15	P57071	1507 aa	Predicted RBP	12.2	□□□□□ -0.46
RNF31-222	ENST00000560631	VWDE	Q8N2E2	1590 aa		12.19	□□□□□ -0.46
RNF31-222	ENST00000560631	NPAT	Q14207	1427 aa		12.19	□□□□□ -0.46
RNF31-222	ENST00000560631	WASHC2C	Q9Y4E1	1318 aa		12.18	□□□□□ -0.46
RNF31-222	ENST00000560631	ITGAE	P38570	1179 aa		12.18	□□□□□ -0.46
RNF31-222	ENST00000560631	CFAP65	Q6ZU64	1925 aa	Known RBP	12.17	□□□□□ -0.46
RNF31-222	ENST00000560631	ABCC3	O15438	1527 aa		12.17	□□□□□ -0.46
RNF31-222	ENST00000560631	CEBPA	P49715	358 aa	Predicted RBP	12.17	□□□□□ -0.46
RNF31-222	ENST00000560631	ATF5	Q9Y2D1	282 aa	Predicted RBP	12.17	□□□□□ -0.46
RNF31-222	ENST00000560631	CEP152	O94986	1710 aa		12.17	□□□□□ -0.46
RNF31-222	ENST00000560631	LMTK2	Q8IWU2	1503 aa		12.16	□□□□□ -0.46
RNF31-222	ENST00000560631	PZP	P20742	1482 aa		12.16	□□□□□ -0.46
RNF31-222	ENST00000560631	NAIP	Q13075	1403 aa		12.16	□□□□□ -0.46
RNF31-222	ENST00000560631	ARHGAP31	Q2M1Z3	1444 aa		12.16	□□□□□ -0.46
RNF31-222	ENST00000560631	KANK1	Q14678	1352 aa		12.16	□□□□□ -0.46
RNF31-222	ENST00000560631	GCC2	Q8IWJ2	1684 aa		12.16	□□□□□ -0.46
RNF31-222	ENST00000560631	HFM1	A2PYH4	1435 aa		12.15	□□□□□ -0.46
RNF31-222	ENST00000560631	PREX1	Q8TCU6	1659 aa		12.15	□□□□□ -0.46
RNF31-222	ENST00000560631	UNC13B	O14795	1591 aa		12.14	□□□□□ -0.47
RNF31-222	ENST00000560631	CAMSAP1	Q5T5Y3	1602 aa		12.13	□□□□□ -0.47
RNF31-222	ENST00000560631	LMTK3	Q96Q04	1460 aa		12.12	□□□□□ -0.47
RNF31-222	ENST00000560631	IQGAP3	Q86VI3	1631 aa		12.11	□□□□□ -0.47
RNF31-222	ENST00000560631	UHRF1BP1	Q6BDS2	1440 aa		12.11	□□□□□ -0.47
RNF31-222	ENST00000560631	TET3	O43151	1660 aa		12.1	□□□□□ -0.47
RNF31-222	ENST00000560631	SPATA31D1	Q6ZQQ2	1576 aa		12.1	□□□□□ -0.47
RNF31-222	ENST00000560631	ACIN1	Q9UKV3	1341 aa	Known RBP	12.1	□□□□□ -0.47
RNF31-222	ENST00000560631	FBXO31	Q5XUX0	539 aa	Predicted RBP	12.09	□□□□□ -0.47
RNF31-222	ENST00000560631	ZNF142	P52746	1687 aa	Predicted RBP	12.09	□□□□□ -0.47
RNF31-222	ENST00000560631	ERVK-7	P63135	1459 aa		12.08	□□□□□ -0.47
RNF31-222	ENST00000560631	RPRD2	Q5VT52	1461 aa	Known RBP	12.08	□□□□□ -0.47
RNF31-222	ENST00000560631	TNR	Q92752	1358 aa		12.08	□□□□□ -0.48
RNF31-222	ENST00000560631	EFCAB6	Q5THR3	1501 aa		12.08	□□□□□ -0.48
RNF31-222	ENST00000560631	NUP155	O75694	1391 aa		12.07	□□□□□ -0.48
RNF31-222	ENST00000560631	MYO3A	Q8NEV4	1616 aa		12.07	□□□□□ -0.48
RNF31-222	ENST00000560631	NLRP1	Q9C000	1473 aa		12.07	□□□□□ -0.48
RNF31-222	ENST00000560631	NOS1	P29475	1434 aa		12.06	□□□□□ -0.48
RNF31-222	ENST00000560631	ZBTB22	O15209	634 aa		12.06	□□□□□ -0.48
RNF31-222	ENST00000560631	A2ML1	A8K2U0	1454 aa		12.06	□□□□□ -0.48
RNF31-222	ENST00000560631	SETD5	Q9C0A6	1442 aa		12.05	□□□□□ -0.48
RNF31-222	ENST00000560631	HRC	P23327	699 aa		12.05	□□□□□ -0.48
RNF31-222	ENST00000560631	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	12.05	□□□□□ -0.48
RNF31-222	ENST00000560631		E9PCH4	1651 aa		12.04	□□□□□ -0.48
RNF31-222	ENST00000560631	STRC	Q7RTU9	1775 aa		12.02	□□□□□ -0.48
RNF31-222	ENST00000560631	HSPA2	P54652	639 aa		12.02	□□□□□ -0.49
RNF31-222	ENST00000560631	KDM5A	P29375	1690 aa	Known RBP	12.02	□□□□□ -0.49
RNF31-222	ENST00000560631	PLA2R1	Q13018	1463 aa		12.02	□□□□□ -0.49
RNF31-222	ENST00000560631	SYNM	O15061	1565 aa		12.01	□□□□□ -0.49
RNF31-222	ENST00000560631	SLC52A1	Q9NWF4	448 aa		12.01	□□□□□ -0.49
RNF31-222	ENST00000560631	THEMIS	Q8N1K5	641 aa	Predicted RBP	12	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms