RNA–Protein interactions for RNA: ENST00000560588.5

RMDN3-209, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 2

Gene RMDN3, Length 2,202 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-209ENST00000560588 HNRNPUQ00839 825 aaKnown RBP eCLIP14.2□□□□□ -0.14
RMDN3-209ENST00000560588 LAMC1P11047 1609 aa14.2□□□□□ -0.14
RMDN3-209ENST00000560588 FKBP8Q14318 412 aa14.19□□□□□ -0.14
RMDN3-209ENST00000560588 RTEL1-TNFRSF6BF6WH68 1400 aa14.19□□□□□ -0.14
RMDN3-209ENST00000560588 ZNF326Q5BKZ1 582 aaKnown RBP14.18□□□□□ -0.14
RMDN3-209ENST00000560588 CARD11Q9BXL7 1154 aa14.18□□□□□ -0.14
RMDN3-209ENST00000560588 EIF2AK4Q9P2K8 1649 aaKnown RBP14.18□□□□□ -0.14
RMDN3-209ENST00000560588 DHX29Q7Z478 1369 aaKnown RBP14.17□□□□□ -0.14
RMDN3-209ENST00000560588 KTN1Q86UP2 1357 aaKnown RBP14.17□□□□□ -0.14
RMDN3-209ENST00000560588 TRPM1Q7Z4N2 1603 aa14.17□□□□□ -0.14
RMDN3-209ENST00000560588 MRS2Q9HD23 443 aa14.17□□□□□ -0.14
RMDN3-209ENST00000560588 PRAG1Q86YV5 1406 aa14.16□□□□□ -0.14
RMDN3-209ENST00000560588 ERICH6BQ5W0A0 696 aa14.16□□□□□ -0.14
RMDN3-209ENST00000560588 DCAF11Q8TEB1 546 aa14.15□□□□□ -0.14
RMDN3-209ENST00000560588 GPRASP1Q5JY77 1395 aa14.14□□□□□ -0.15
RMDN3-209ENST00000560588 PLA2R1Q13018 1463 aa14.14□□□□□ -0.15
RMDN3-209ENST00000560588 ZBED9Q6R2W3 1325 aa14.14□□□□□ -0.15
RMDN3-209ENST00000560588 WDR7Q9Y4E6 1490 aa14.13□□□□□ -0.15
RMDN3-209ENST00000560588 E9PCH4 1651 aa14.12□□□□□ -0.15
RMDN3-209ENST00000560588 KDM2AQ9Y2K7 1162 aa14.11□□□□□ -0.15
RMDN3-209ENST00000560588 ABCA9Q8IUA7 1624 aa14.11□□□□□ -0.15
RMDN3-209ENST00000560588 STAC3Q96MF2 364 aa14.11□□□□□ -0.15
RMDN3-209ENST00000560588 A2MP01023 1474 aa14.11□□□□□ -0.15
RMDN3-209ENST00000560588 SPAG9O60271 1321 aaKnown RBP14.11□□□□□ -0.15
RMDN3-209ENST00000560588 TRAPPC8Q9Y2L5 1435 aa14.1□□□□□ -0.15
RMDN3-209ENST00000560588 ZFYVE16Q7Z3T8 1539 aa14.1□□□□□ -0.15
RMDN3-209ENST00000560588 DEPDC5O75140 1603 aa14.1□□□□□ -0.15
RMDN3-209ENST00000560588 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.1□□□□□ -0.15
RMDN3-209ENST00000560588 PRDM15P57071 1507 aaPredicted RBP14.09□□□□□ -0.15
RMDN3-209ENST00000560588 ST20-MTHFSA0A0A6YYL1 179 aa14.08□□□□□ -0.16
RMDN3-209ENST00000560588 RALBP1Q15311 655 aa14.08□□□□□ -0.16
RMDN3-209ENST00000560588 CCDC184Q52MB2 194 aa14.08□□□□□ -0.16
RMDN3-209ENST00000560588 FAM9BQ8IZU0 186 aa14.08□□□□□ -0.16
RMDN3-209ENST00000560588 INO80Q9ULG1 1556 aaPredicted RBP14.08□□□□□ -0.16
RMDN3-209ENST00000560588 TET3O43151 1660 aa14.07□□□□□ -0.16
RMDN3-209ENST00000560588 TRPM2O94759 1503 aa14.07□□□□□ -0.16
RMDN3-209ENST00000560588 NEURL4Q96JN8 1562 aa14.06□□□□□ -0.16
RMDN3-209ENST00000560588 KANK1Q14678 1352 aa14.06□□□□□ -0.16
RMDN3-209ENST00000560588 RNF17Q9BXT8 1623 aaKnown RBP14.06□□□□□ -0.16
RMDN3-209ENST00000560588 ATP7AQ04656 1500 aa14.06□□□□□ -0.16
RMDN3-209ENST00000560588 POLR3GLQ9BT43 218 aa14.06□□□□□ -0.16
RMDN3-209ENST00000560588 TSHZ2Q9NRE2 1034 aa14.05□□□□□ -0.16
RMDN3-209ENST00000560588 BRD4O60885 1362 aaPredicted RBP14.05□□□□□ -0.16
RMDN3-209ENST00000560588 FANCAO15360 1455 aa14.05□□□□□ -0.16
RMDN3-209ENST00000560588 BCANQ96GW7 911 aa14.05□□□□□ -0.16
RMDN3-209ENST00000560588 CEP152O94986 1710 aa14.04□□□□□ -0.16
RMDN3-209ENST00000560588 SPHKAPQ2M3C7 1700 aa14.04□□□□□ -0.16
RMDN3-209ENST00000560588 WASHC2CQ9Y4E1 1318 aa14.04□□□□□ -0.16
RMDN3-209ENST00000560588 PTPRTO14522 1441 aa14.04□□□□□ -0.16
RMDN3-209ENST00000560588 COL17A1Q9UMD9 1497 aaPredicted RBP14.04□□□□□ -0.16
RMDN3-209ENST00000560588 MYT1Q01538 1121 aa14.04□□□□□ -0.16
RMDN3-209ENST00000560588 VWDEQ8N2E2 1590 aa14.04□□□□□ -0.16
RMDN3-209ENST00000560588 MYBBP1AQ9BQG0 1328 aaKnown RBP14.03□□□□□ -0.16
RMDN3-209ENST00000560588 CFAP74Q9C0B2 1584 aa14.02□□□□□ -0.17
RMDN3-209ENST00000560588 SMG6Q86US8 1419 aaKnown RBP14.02□□□□□ -0.17
RMDN3-209ENST00000560588 RGL3Q3MIN7 710 aa14.01□□□□□ -0.17
RMDN3-209ENST00000560588 ADGRL1O94910 1474 aa14.01□□□□□ -0.17
RMDN3-209ENST00000560588 TMC1Q8TDI8 760 aa14□□□□□ -0.17
RMDN3-209ENST00000560588 MADDQ8WXG6 1647 aa14□□□□□ -0.17
RMDN3-209ENST00000560588 ASXL2Q76L83 1435 aa14□□□□□ -0.17
RMDN3-209ENST00000560588 KIAA1210Q9ULL0 1709 aa13.99□□□□□ -0.17
RMDN3-209ENST00000560588 SCAPERQ9BY12 1400 aa13.99□□□□□ -0.17
RMDN3-209ENST00000560588 AFAP1Q8N556 730 aa13.99□□□□□ -0.17
RMDN3-209ENST00000560588 PNISRQ8TF01 805 aaKnown RBP13.99□□□□□ -0.17
RMDN3-209ENST00000560588 TMF1P82094 1093 aa13.98□□□□□ -0.17
RMDN3-209ENST00000560588 INSRP06213 1382 aa13.98□□□□□ -0.17
RMDN3-209ENST00000560588 LRPPRCP42704 1394 aaKnown RBP13.98□□□□□ -0.17
RMDN3-209ENST00000560588 PPP4R2Q9NY27 417 aa13.98□□□□□ -0.17
RMDN3-209ENST00000560588 IQGAP1P46940 1657 aa13.98□□□□□ -0.17
RMDN3-209ENST00000560588 PARD3Q8TEW0 1356 aa13.97□□□□□ -0.17
RMDN3-209ENST00000560588 NBPF1Q3BBV0 1214 aa13.97□□□□□ -0.17
RMDN3-209ENST00000560588 ZMYM4Q5VZL5 1548 aa13.97□□□□□ -0.17
RMDN3-209ENST00000560588 CLTCL1P53675 1640 aa13.97□□□□□ -0.17
RMDN3-209ENST00000560588 NLRP13Q86W25 1043 aa13.96□□□□□ -0.17
RMDN3-209ENST00000560588 TESK2Q96S53 571 aa13.96□□□□□ -0.17
RMDN3-209ENST00000560588 LMTK2Q8IWU2 1503 aa13.96□□□□□ -0.18
RMDN3-209ENST00000560588 ZNF518AQ6AHZ1 1483 aa13.95□□□□□ -0.18
RMDN3-209ENST00000560588 SLC24A1O60721 1099 aa13.95□□□□□ -0.18
RMDN3-209ENST00000560588 NPM1P06748 294 aaKnown RBP eCLIP13.95□□□□□ -0.18
RMDN3-209ENST00000560588 CDCA8Q53HL2 280 aa13.95□□□□□ -0.18
RMDN3-209ENST00000560588 NUDCQ9Y266 331 aa13.95□□□□□ -0.18
RMDN3-209ENST00000560588 MROH1Q8NDA8 1641 aa13.94□□□□□ -0.18
RMDN3-209ENST00000560588 SCAF11Q99590 1463 aaKnown RBP13.93□□□□□ -0.18
RMDN3-209ENST00000560588 EFCAB6Q5THR3 1501 aa13.93□□□□□ -0.18
RMDN3-209ENST00000560588 EIF3AQ14152 1382 aaKnown RBP13.93□□□□□ -0.18
RMDN3-209ENST00000560588 KIDINS220Q9ULH0 1771 aa13.93□□□□□ -0.18
RMDN3-209ENST00000560588 MYOM2P54296 1465 aa13.92□□□□□ -0.18
RMDN3-209ENST00000560588 DISP3Q9P2K9 1392 aa13.92□□□□□ -0.18
RMDN3-209ENST00000560588 KIF1BO60333 1816 aa13.92□□□□□ -0.18
RMDN3-209ENST00000560588 OSCARQ8IYS5 282 aa13.92□□□□□ -0.18
RMDN3-209ENST00000560588 PER1O15534 1290 aaPredicted RBP13.91□□□□□ -0.18
RMDN3-209ENST00000560588 KIF3BO15066 747 aa13.91□□□□□ -0.18
RMDN3-209ENST00000560588 RNF123Q5XPI4 1314 aa13.9□□□□□ -0.18
RMDN3-209ENST00000560588 SYNMO15061 1565 aa13.9□□□□□ -0.18
RMDN3-209ENST00000560588 MYT1LQ9UL68 1186 aa13.9□□□□□ -0.18
RMDN3-209ENST00000560588 MLH3Q9UHC1 1453 aa13.89□□□□□ -0.19
RMDN3-209ENST00000560588 PDE3BQ13370 1112 aa13.89□□□□□ -0.19
RMDN3-209ENST00000560588 MAP3K4Q9Y6R4 1608 aa13.88□□□□□ -0.19
RMDN3-209ENST00000560588 POGZQ7Z3K3 1410 aa13.88□□□□□ -0.19
RMDN3-209ENST00000560588 IFT172Q9UG01 1749 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms