RNA–Protein interactions for RNA: ENST00000560564.1

SPG21-211, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-211ENST00000560564 TCOF1Q13428 1488 aaKnown RBP25.4■■□□□ 1.66
SPG21-211ENST00000560564 FGD6Q6ZV73 1430 aa25.4■■□□□ 1.66
SPG21-211ENST00000560564 EIF2AK4Q9P2K8 1649 aaKnown RBP25.4■■□□□ 1.66
SPG21-211ENST00000560564 SHANK2Q9UPX8 1470 aa25.4■■□□□ 1.66
SPG21-211ENST00000560564 ABCC5O15440 1437 aa25.38■■□□□ 1.65
SPG21-211ENST00000560564 DNMT1P26358 1616 aaKnown RBP25.37■■□□□ 1.65
SPG21-211ENST00000560564 NCOA1Q15788 1441 aa25.37■■□□□ 1.65
SPG21-211ENST00000560564 MROH1Q8NDA8 1641 aa25.36■■□□□ 1.65
SPG21-211ENST00000560564 CEP170BQ9Y4F5 1589 aaPredicted RBP25.35■■□□□ 1.65
SPG21-211ENST00000560564 PZPP20742 1482 aa25.34■■□□□ 1.65
SPG21-211ENST00000560564 CAMSAP1Q5T5Y3 1602 aa25.34■■□□□ 1.65
SPG21-211ENST00000560564 DUOX2Q9NRD8 1548 aa25.33■■□□□ 1.65
SPG21-211ENST00000560564 DAPK1P53355 1430 aa25.33■■□□□ 1.65
SPG21-211ENST00000560564 PTPRTO14522 1441 aa25.31■■□□□ 1.64
SPG21-211ENST00000560564 ZC3H13Q5T200 1668 aaKnown RBP25.31■■□□□ 1.64
SPG21-211ENST00000560564 DMRT2Q9Y5R5 561 aa25.3■■□□□ 1.64
SPG21-211ENST00000560564 ABCC3O15438 1527 aa25.3■■□□□ 1.64
SPG21-211ENST00000560564 FBXO41Q8TF61 875 aa25.29■■□□□ 1.64
SPG21-211ENST00000560564 WASHC2CQ9Y4E1 1318 aa25.29■■□□□ 1.64
SPG21-211ENST00000560564 KIF15Q9NS87 1388 aa25.28■■□□□ 1.64
SPG21-211ENST00000560564 PLA2R1Q13018 1463 aa25.28■■□□□ 1.64
SPG21-211ENST00000560564 A2ML1A8K2U0 1454 aa25.27■■□□□ 1.64
SPG21-211ENST00000560564 FBXO31Q5XUX0 539 aaPredicted RBP25.26■■□□□ 1.63
SPG21-211ENST00000560564 ERBINQ96RT1 1412 aa25.25■■□□□ 1.63
SPG21-211ENST00000560564 CEP152O94986 1710 aa25.24■■□□□ 1.63
SPG21-211ENST00000560564 PRDM15P57071 1507 aaPredicted RBP25.24■■□□□ 1.63
SPG21-211ENST00000560564 TNRQ92752 1358 aa25.24■■□□□ 1.63
SPG21-211ENST00000560564 DEPDC5O75140 1603 aa25.23■■□□□ 1.63
SPG21-211ENST00000560564 CERKQ8TCT0 537 aa25.21■■□□□ 1.63
SPG21-211ENST00000560564 SPATA31D1Q6ZQQ2 1576 aa25.2■■□□□ 1.62
SPG21-211ENST00000560564 RRP7BPQ9NSQ0 103 aa25.19■■□□□ 1.62
SPG21-211ENST00000560564 ADGRL2O95490 1459 aa25.19■■□□□ 1.62
SPG21-211ENST00000560564 LTBP4Q8N2S1 1624 aa25.19■■□□□ 1.62
SPG21-211ENST00000560564 NLRP1Q9C000 1473 aa25.17■■□□□ 1.62
SPG21-211ENST00000560564 NCKAP5LQ9HCH0 1330 aa25.16■■□□□ 1.62
SPG21-211ENST00000560564 ANKRD30AQ9BXX3 1397 aa25.16■■□□□ 1.62
SPG21-211ENST00000560564 CFAP65Q6ZU64 1925 aaKnown RBP25.16■■□□□ 1.62
SPG21-211ENST00000560564 ERVK-7P63135 1459 aa25.15■■□□□ 1.62
SPG21-211ENST00000560564 PKD2Q13563 968 aa25.14■■□□□ 1.62
SPG21-211ENST00000560564 CHIC2Q9UKJ5 165 aa25.14■■□□□ 1.62
SPG21-211ENST00000560564 POLR1AO95602 1720 aaPredicted RBP25.14■■□□□ 1.61
SPG21-211ENST00000560564 ARHGAP31Q2M1Z3 1444 aa25.12■■□□□ 1.61
SPG21-211ENST00000560564 VWDEQ8N2E2 1590 aa25.12■■□□□ 1.61
SPG21-211ENST00000560564 NEURL4Q96JN8 1562 aa25.12■■□□□ 1.61
SPG21-211ENST00000560564 FAM50AQ14320 339 aaKnown RBP25.1■■□□□ 1.61
SPG21-211ENST00000560564 UGGT1Q9NYU2 1555 aa25.1■■□□□ 1.61
SPG21-211ENST00000560564 LMTK2Q8IWU2 1503 aa25.08■■□□□ 1.61
SPG21-211ENST00000560564 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.05■■□□□ 1.6
SPG21-211ENST00000560564 UBR1Q8IWV7 1749 aa25.03■■□□□ 1.6
SPG21-211ENST00000560564 IQSEC2Q5JU85 1478 aa25.02■■□□□ 1.6
SPG21-211ENST00000560564 THEMISQ8N1K5 641 aaPredicted RBP25.02■■□□□ 1.6
SPG21-211ENST00000560564 ZNF335Q9H4Z2 1342 aaPredicted RBP25.02■■□□□ 1.6
SPG21-211ENST00000560564 ANKRD50Q9ULJ7 1429 aa25.02■■□□□ 1.6
SPG21-211ENST00000560564 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.01■■□□□ 1.59
SPG21-211ENST00000560564 KANK1Q14678 1352 aa25.01■■□□□ 1.59
SPG21-211ENST00000560564 MED14O60244 1454 aa25■■□□□ 1.59
SPG21-211ENST00000560564 EFCAB6Q5THR3 1501 aa25■■□□□ 1.59
SPG21-211ENST00000560564 ROCK1Q13464 1354 aa24.97■■□□□ 1.59
SPG21-211ENST00000560564 ANKLE2Q86XL3 938 aa24.96■■□□□ 1.59
SPG21-211ENST00000560564 PPARGC1BQ86YN6 1023 aaKnown RBP24.96■■□□□ 1.59
SPG21-211ENST00000560564 PIK3C2BO00750 1634 aa24.95■■□□□ 1.58
SPG21-211ENST00000560564 UNC13BO14795 1591 aa24.95■■□□□ 1.58
SPG21-211ENST00000560564 SYNMO15061 1565 aa24.95■■□□□ 1.58
SPG21-211ENST00000560564 ARHGAP23Q9P227 1491 aa24.94■■□□□ 1.58
SPG21-211ENST00000560564 IQGAP1P46940 1657 aa24.94■■□□□ 1.58
SPG21-211ENST00000560564 NPHP4O75161 1426 aaPredicted RBP24.93■■□□□ 1.58
SPG21-211ENST00000560564 NOS1P29475 1434 aa24.93■■□□□ 1.58
SPG21-211ENST00000560564 SLIT1O75093 1534 aa24.92■■□□□ 1.58
SPG21-211ENST00000560564 KDM5AP29375 1690 aaKnown RBP24.92■■□□□ 1.58
SPG21-211ENST00000560564 TET3O43151 1660 aa24.91■■□□□ 1.58
SPG21-211ENST00000560564 RPRD2Q5VT52 1461 aaKnown RBP24.89■■□□□ 1.57
SPG21-211ENST00000560564 GCC2Q8IWJ2 1684 aa24.88■■□□□ 1.57
SPG21-211ENST00000560564 RRBP1Q9P2E9 1410 aaKnown RBP24.88■■□□□ 1.57
SPG21-211ENST00000560564 SCAF11Q99590 1463 aaKnown RBP24.86■■□□□ 1.57
SPG21-211ENST00000560564 CPS1P31327 1500 aa24.86■■□□□ 1.57
SPG21-211ENST00000560564 IQGAP3Q86VI3 1631 aa24.85■■□□□ 1.57
SPG21-211ENST00000560564 IDI1Q13907 227 aa24.84■■□□□ 1.57
SPG21-211ENST00000560564 STRCP1A6NGW2 1772 aa24.84■■□□□ 1.57
SPG21-211ENST00000560564 LTKP29376 864 aa24.83■■□□□ 1.57
SPG21-211ENST00000560564 E9PCH4 1651 aa24.81■■□□□ 1.56
SPG21-211ENST00000560564 ADGRB3O60242 1522 aa24.81■■□□□ 1.56
SPG21-211ENST00000560564 TMEM2Q9UHN6 1383 aa24.81■■□□□ 1.56
SPG21-211ENST00000560564 ITGAEP38570 1179 aa24.8■■□□□ 1.56
SPG21-211ENST00000560564 TXNDC2Q86VQ3 553 aa24.77■■□□□ 1.56
SPG21-211ENST00000560564 SLC52A1Q9NWF4 448 aa24.77■■□□□ 1.56
SPG21-211ENST00000560564 MYO5BQ9ULV0 1848 aa24.77■■□□□ 1.56
SPG21-211ENST00000560564 TMEM131LA2VDJ0 1609 aa24.72■■□□□ 1.55
SPG21-211ENST00000560564 NUP155O75694 1391 aa24.72■■□□□ 1.55
SPG21-211ENST00000560564 UBAP1LF5GYI3 381 aa24.72■■□□□ 1.55
SPG21-211ENST00000560564 STAG3Q9UJ98 1225 aa24.72■■□□□ 1.55
SPG21-211ENST00000560564 EID1Q9Y6B2 187 aa24.71■■□□□ 1.55
SPG21-211ENST00000560564 LRRC7Q96NW7 1537 aa24.71■■□□□ 1.55
SPG21-211ENST00000560564 ALKQ9UM73 1620 aa24.7■■□□□ 1.54
SPG21-211ENST00000560564 NAIPQ13075 1403 aa24.69■■□□□ 1.54
SPG21-211ENST00000560564 ZFYVE9O95405 1425 aa24.69■■□□□ 1.54
SPG21-211ENST00000560564 XIRP1Q702N8 1843 aaKnown RBP24.65■■□□□ 1.54
SPG21-211ENST00000560564 SPHKAPQ2M3C7 1700 aa24.63■■□□□ 1.53
SPG21-211ENST00000560564 HFM1A2PYH4 1435 aa24.61■■□□□ 1.53
SPG21-211ENST00000560564 RIMS2Q9UQ26 1411 aa24.61■■□□□ 1.53
SPG21-211ENST00000560564 NWD1Q149M9 1564 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms