RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 CFAP65Q6ZU64 1925 aaKnown RBP14.74□□□□□ -0.05
RABGGTA-217ENST00000560521 CFDP1Q9UEE9 299 aaPredicted RBP14.73□□□□□ -0.05
RABGGTA-217ENST00000560521 FBXO31Q5XUX0 539 aaPredicted RBP14.72□□□□□ -0.05
RABGGTA-217ENST00000560521 PHF23Q9BUL5 403 aaPredicted RBP14.71□□□□□ -0.05
RABGGTA-217ENST00000560521 DEPDC5O75140 1603 aa14.7□□□□□ -0.06
RABGGTA-217ENST00000560521 IQGAP1P46940 1657 aa14.7□□□□□ -0.06
RABGGTA-217ENST00000560521 TNRQ92752 1358 aa14.7□□□□□ -0.06
RABGGTA-217ENST00000560521 CCNB3Q8WWL7 1395 aa14.69□□□□□ -0.06
RABGGTA-217ENST00000560521 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.69□□□□□ -0.06
RABGGTA-217ENST00000560521 ZNF644Q9H582 1327 aaPredicted RBP14.68□□□□□ -0.06
RABGGTA-217ENST00000560521 ANKLE2Q86XL3 938 aa14.68□□□□□ -0.06
RABGGTA-217ENST00000560521 DHX29Q7Z478 1369 aaKnown RBP14.68□□□□□ -0.06
RABGGTA-217ENST00000560521 XIRP1Q702N8 1843 aaKnown RBP14.68□□□□□ -0.06
RABGGTA-217ENST00000560521 MED14O60244 1454 aa14.68□□□□□ -0.06
RABGGTA-217ENST00000560521 PZPP20742 1482 aa14.68□□□□□ -0.06
RABGGTA-217ENST00000560521 MBD5Q9P267 1494 aa14.68□□□□□ -0.06
RABGGTA-217ENST00000560521 TIAM1Q13009 1591 aa14.67□□□□□ -0.06
RABGGTA-217ENST00000560521 RTEL1-TNFRSF6BF6WH68 1400 aa14.66□□□□□ -0.06
RABGGTA-217ENST00000560521 UGGT1Q9NYU2 1555 aa14.66□□□□□ -0.06
RABGGTA-217ENST00000560521 NPHP4O75161 1426 aaPredicted RBP14.66□□□□□ -0.06
RABGGTA-217ENST00000560521 THEMISQ8N1K5 641 aaPredicted RBP14.65□□□□□ -0.06
RABGGTA-217ENST00000560521 SENP3Q9H4L4 574 aaPredicted RBP14.65□□□□□ -0.06
RABGGTA-217ENST00000560521 KDM5DQ9BY66 1539 aa14.65□□□□□ -0.06
RABGGTA-217ENST00000560521 KIF3BO15066 747 aa14.64□□□□□ -0.07
RABGGTA-217ENST00000560521 LRRC7Q96NW7 1537 aa14.64□□□□□ -0.07
RABGGTA-217ENST00000560521 FAM135AQ9P2D6 1515 aa14.64□□□□□ -0.07
RABGGTA-217ENST00000560521 MIA2Q96PC5 1412 aa14.64□□□□□ -0.07
RABGGTA-217ENST00000560521 ZC3H13Q5T200 1668 aaKnown RBP14.64□□□□□ -0.07
RABGGTA-217ENST00000560521 RNF17Q9BXT8 1623 aaKnown RBP14.63□□□□□ -0.07
RABGGTA-217ENST00000560521 RGS17Q9UGC6 210 aaPredicted RBP14.63□□□□□ -0.07
RABGGTA-217ENST00000560521 NLRP1Q9C000 1473 aa14.63□□□□□ -0.07
RABGGTA-217ENST00000560521 SYNMO15061 1565 aa14.62□□□□□ -0.07
RABGGTA-217ENST00000560521 CHIC1Q5VXU3 224 aa14.62□□□□□ -0.07
RABGGTA-217ENST00000560521 WASHC2CQ9Y4E1 1318 aa14.62□□□□□ -0.07
RABGGTA-217ENST00000560521 MTUS2Q5JR59 1369 aa14.61□□□□□ -0.07
RABGGTA-217ENST00000560521 UBR1Q8IWV7 1749 aa14.59□□□□□ -0.07
RABGGTA-217ENST00000560521 CEP152O94986 1710 aa14.57□□□□□ -0.08
RABGGTA-217ENST00000560521 CCDC141Q6ZP82 1450 aa14.57□□□□□ -0.08
RABGGTA-217ENST00000560521 EHBP1L1Q8N3D4 1523 aa14.56□□□□□ -0.08
RABGGTA-217ENST00000560521 CEP162Q5TB80 1403 aa14.54□□□□□ -0.08
RABGGTA-217ENST00000560521 CAMSAP2Q08AD1 1489 aa14.53□□□□□ -0.08
RABGGTA-217ENST00000560521 ABCC3O15438 1527 aa14.52□□□□□ -0.08
RABGGTA-217ENST00000560521 RSPH4AQ5TD94 716 aa14.52□□□□□ -0.09
RABGGTA-217ENST00000560521 ARHGEF5Q12774 1597 aa14.51□□□□□ -0.09
RABGGTA-217ENST00000560521 POTEAQ6S8J7 498 aa14.51□□□□□ -0.09
RABGGTA-217ENST00000560521 SETD1AO15047 1707 aaKnown RBP14.51□□□□□ -0.09
RABGGTA-217ENST00000560521 ERVK-7P63135 1459 aa14.5□□□□□ -0.09
RABGGTA-217ENST00000560521 MROH1Q8NDA8 1641 aa14.5□□□□□ -0.09
RABGGTA-217ENST00000560521 NCOA2Q15596 1464 aa14.5□□□□□ -0.09
RABGGTA-217ENST00000560521 EIF2AK4Q9P2K8 1649 aaKnown RBP14.49□□□□□ -0.09
RABGGTA-217ENST00000560521 LTKP29376 864 aa14.49□□□□□ -0.09
RABGGTA-217ENST00000560521 ROBO1Q9Y6N7 1651 aa14.49□□□□□ -0.09
RABGGTA-217ENST00000560521 SCAF11Q99590 1463 aaKnown RBP14.48□□□□□ -0.09
RABGGTA-217ENST00000560521 SLIT1O75093 1534 aa14.47□□□□□ -0.09
RABGGTA-217ENST00000560521 ARHGAP23Q9P227 1491 aa14.47□□□□□ -0.09
RABGGTA-217ENST00000560521 FAM135BQ49AJ0 1406 aa14.47□□□□□ -0.09
RABGGTA-217ENST00000560521 MAST1Q9Y2H9 1570 aa14.47□□□□□ -0.09
RABGGTA-217ENST00000560521 TSPY4P0CV99 314 aa14.46□□□□□ -0.09
RABGGTA-217ENST00000560521 TSPY10P0CW01 314 aa14.46□□□□□ -0.09
RABGGTA-217ENST00000560521 TXNDC2Q86VQ3 553 aa14.46□□□□□ -0.09
RABGGTA-217ENST00000560521 PIK3C2BO00750 1634 aa14.44□□□□□ -0.1
RABGGTA-217ENST00000560521 PHLPP1O60346 1717 aa14.42□□□□□ -0.1
RABGGTA-217ENST00000560521 KDM5AP29375 1690 aaKnown RBP14.4□□□□□ -0.1
RABGGTA-217ENST00000560521 TMEM94Q12767 1356 aa14.4□□□□□ -0.1
RABGGTA-217ENST00000560521 MAP3K1Q13233 1512 aa14.4□□□□□ -0.1
RABGGTA-217ENST00000560521 TET3O43151 1660 aa14.39□□□□□ -0.11
RABGGTA-217ENST00000560521 EID1Q9Y6B2 187 aa14.38□□□□□ -0.11
RABGGTA-217ENST00000560521 ARHGAP31Q2M1Z3 1444 aa14.38□□□□□ -0.11
RABGGTA-217ENST00000560521 CHD2O14647 1828 aaKnown RBP14.38□□□□□ -0.11
RABGGTA-217ENST00000560521 MYO5BQ9ULV0 1848 aa14.38□□□□□ -0.11
RABGGTA-217ENST00000560521 RBM33Q96EV2 1170 aaKnown RBP14.37□□□□□ -0.11
RABGGTA-217ENST00000560521 DUOX2Q9NRD8 1548 aa14.36□□□□□ -0.11
RABGGTA-217ENST00000560521 TMEM2Q9UHN6 1383 aa14.36□□□□□ -0.11
RABGGTA-217ENST00000560521 KCNA6P17658 529 aa14.36□□□□□ -0.11
RABGGTA-217ENST00000560521 PRDM15P57071 1507 aaPredicted RBP14.36□□□□□ -0.11
RABGGTA-217ENST00000560521 PROSER2Q86WR7 435 aaPredicted RBP14.35□□□□□ -0.11
RABGGTA-217ENST00000560521 NWD1Q149M9 1564 aa14.34□□□□□ -0.11
RABGGTA-217ENST00000560521 CROCC2H7BZ55 1655 aa14.33□□□□□ -0.11
RABGGTA-217ENST00000560521 LRRC9Q6ZRR7 1453 aa14.33□□□□□ -0.12
RABGGTA-217ENST00000560521 EFCAB6Q5THR3 1501 aa14.33□□□□□ -0.12
RABGGTA-217ENST00000560521 SLC26A8Q96RN1 970 aa14.33□□□□□ -0.12
RABGGTA-217ENST00000560521 COL16A1Q07092 1604 aaPredicted RBP14.33□□□□□ -0.12
RABGGTA-217ENST00000560521 IDI1Q13907 227 aa14.31□□□□□ -0.12
RABGGTA-217ENST00000560521 UPF1Q92900 1129 aaKnown RBP eCLIP14.31□□□□□ -0.12
RABGGTA-217ENST00000560521 STAG3Q9UJ98 1225 aa14.31□□□□□ -0.12
RABGGTA-217ENST00000560521 JCADQ9P266 1359 aa14.31□□□□□ -0.12
RABGGTA-217ENST00000560521 SLAIN2Q9P270 581 aa14.3□□□□□ -0.12
RABGGTA-217ENST00000560521 NKTRP30414 1462 aaKnown RBP14.3□□□□□ -0.12
RABGGTA-217ENST00000560521 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.29□□□□□ -0.123e-8■■□□□ 11.8
RABGGTA-217ENST00000560521 LRP6O75581 1613 aa14.29□□□□□ -0.12
RABGGTA-217ENST00000560521 MSH6P52701 1360 aa14.28□□□□□ -0.12
RABGGTA-217ENST00000560521 SHPRHQ149N8 1683 aa14.28□□□□□ -0.12
RABGGTA-217ENST00000560521 MYOM3Q5VTT5 1437 aa14.28□□□□□ -0.12
RABGGTA-217ENST00000560521 ERBINQ96RT1 1412 aa14.28□□□□□ -0.12
RABGGTA-217ENST00000560521 KIF15Q9NS87 1388 aa14.27□□□□□ -0.12
RABGGTA-217ENST00000560521 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.27□□□□□ -0.13
RABGGTA-217ENST00000560521 KANK4Q5T7N3 995 aaPredicted RBP14.26□□□□□ -0.13
RABGGTA-217ENST00000560521 RRP7BPQ9NSQ0 103 aa14.26□□□□□ -0.13
RABGGTA-217ENST00000560521 ADGRB3O60242 1522 aa14.25□□□□□ -0.13
RABGGTA-217ENST00000560521 LMTK2Q8IWU2 1503 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms