RNA–Protein interactions for RNA: ENST00000560519.1

HERC1-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-209ENST00000560519 EIF2AK4Q9P2K8 1649 aaKnown RBP15.5■□□□□ 0.07
HERC1-209ENST00000560519 CPS1P31327 1500 aa15.5■□□□□ 0.07
HERC1-209ENST00000560519 NEURL4Q96JN8 1562 aa15.49■□□□□ 0.07
HERC1-209ENST00000560519 RNF17Q9BXT8 1623 aaKnown RBP15.49■□□□□ 0.07
HERC1-209ENST00000560519 NCOA2Q15596 1464 aa15.48■□□□□ 0.07
HERC1-209ENST00000560519 DEPDC5O75140 1603 aa15.48■□□□□ 0.07
HERC1-209ENST00000560519 DHX29Q7Z478 1369 aaKnown RBP15.48■□□□□ 0.07
HERC1-209ENST00000560519 ZNF335Q9H4Z2 1342 aaPredicted RBP15.47■□□□□ 0.07
HERC1-209ENST00000560519 NCKAP5LQ9HCH0 1330 aa15.47■□□□□ 0.07
HERC1-209ENST00000560519 MAST1Q9Y2H9 1570 aa15.47■□□□□ 0.07
HERC1-209ENST00000560519 NLRP1Q9C000 1473 aa15.46■□□□□ 0.07
HERC1-209ENST00000560519 SOCS7O14512 581 aa15.45■□□□□ 0.06
HERC1-209ENST00000560519 TNRQ92752 1358 aa15.45■□□□□ 0.06
HERC1-209ENST00000560519 IQGAP1P46940 1657 aa15.44■□□□□ 0.06
HERC1-209ENST00000560519 RSPH4AQ5TD94 716 aa15.44■□□□□ 0.06
HERC1-209ENST00000560519 SYNMO15061 1565 aa15.44■□□□□ 0.06
HERC1-209ENST00000560519 UGGT1Q9NYU2 1555 aa15.44■□□□□ 0.06
HERC1-209ENST00000560519 ZNF644Q9H582 1327 aaPredicted RBP15.43■□□□□ 0.06
HERC1-209ENST00000560519 UBAP1LF5GYI3 381 aa15.42■□□□□ 0.06
HERC1-209ENST00000560519 ILDR2Q71H61 639 aa15.41■□□□□ 0.06
HERC1-209ENST00000560519 CROCC2H7BZ55 1655 aa15.41■□□□□ 0.06
HERC1-209ENST00000560519 CEP152O94986 1710 aa15.4■□□□□ 0.06
HERC1-209ENST00000560519 SHANK2Q9UPX8 1470 aa15.4■□□□□ 0.06
HERC1-209ENST00000560519 KIF3BO15066 747 aa15.39■□□□□ 0.05
HERC1-209ENST00000560519 VWDEQ8N2E2 1590 aa15.39■□□□□ 0.05
HERC1-209ENST00000560519 MED14O60244 1454 aa15.39■□□□□ 0.05
HERC1-209ENST00000560519 ABCC3O15438 1527 aa15.38■□□□□ 0.05
HERC1-209ENST00000560519 LRRC9Q6ZRR7 1453 aa15.38■□□□□ 0.05
HERC1-209ENST00000560519 WASHC2CQ9Y4E1 1318 aa15.38■□□□□ 0.05
HERC1-209ENST00000560519 MED1Q15648 1581 aaPredicted RBP15.37■□□□□ 0.05
HERC1-209ENST00000560519 MAP3K1Q13233 1512 aa15.37■□□□□ 0.05
HERC1-209ENST00000560519 UBR1Q8IWV7 1749 aa15.37■□□□□ 0.05
HERC1-209ENST00000560519 MROH1Q8NDA8 1641 aa15.36■□□□□ 0.05
HERC1-209ENST00000560519 VPS8Q8N3P4 1428 aa15.36■□□□□ 0.05
HERC1-209ENST00000560519 NPHP4O75161 1426 aaPredicted RBP15.35■□□□□ 0.05
HERC1-209ENST00000560519 MIA2Q96PC5 1412 aa15.35■□□□□ 0.05
HERC1-209ENST00000560519 TSPY4P0CV99 314 aa15.35■□□□□ 0.05
HERC1-209ENST00000560519 TSPY10P0CW01 314 aa15.35■□□□□ 0.05
HERC1-209ENST00000560519 PRDM15P57071 1507 aaPredicted RBP15.34■□□□□ 0.05
HERC1-209ENST00000560519 DUOX2Q9NRD8 1548 aa15.34■□□□□ 0.05
HERC1-209ENST00000560519 THEMISQ8N1K5 641 aaPredicted RBP15.34■□□□□ 0.05
HERC1-209ENST00000560519 ERVK-7P63135 1459 aa15.33■□□□□ 0.05
HERC1-209ENST00000560519 TOM1O60784 492 aa15.33■□□□□ 0.04
HERC1-209ENST00000560519 ANKLE2Q86XL3 938 aa15.33■□□□□ 0.04
HERC1-209ENST00000560519 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.33■□□□□ 0.04
HERC1-209ENST00000560519 KDM5AP29375 1690 aaKnown RBP15.32■□□□□ 0.04
HERC1-209ENST00000560519 FBXO31Q5XUX0 539 aaPredicted RBP15.31■□□□□ 0.04
HERC1-209ENST00000560519 STRCP1A6NGW2 1772 aa15.31■□□□□ 0.04
HERC1-209ENST00000560519 MYOM3Q5VTT5 1437 aa15.3■□□□□ 0.04
HERC1-209ENST00000560519 SCAF1Q9H7N4 1312 aaKnown RBP15.3■□□□□ 0.04
HERC1-209ENST00000560519 ERBINQ96RT1 1412 aa15.28■□□□□ 0.04
HERC1-209ENST00000560519 PTPN23Q9H3S7 1636 aa15.27■□□□□ 0.03
HERC1-209ENST00000560519 ALKQ9UM73 1620 aa15.27■□□□□ 0.03
HERC1-209ENST00000560519 SLIT1O75093 1534 aa15.27■□□□□ 0.03
HERC1-209ENST00000560519 SCAF11Q99590 1463 aaKnown RBP15.27■□□□□ 0.03
HERC1-209ENST00000560519 PIP4K2BP78356 416 aa15.26■□□□□ 0.03
HERC1-209ENST00000560519 PIK3C2BO00750 1634 aa15.25■□□□□ 0.03
HERC1-209ENST00000560519 LRRC7Q96NW7 1537 aa15.24■□□□□ 0.03
HERC1-209ENST00000560519 CFAP65Q6ZU64 1925 aaKnown RBP15.24■□□□□ 0.03
HERC1-209ENST00000560519 ARHGAP31Q2M1Z3 1444 aa15.24■□□□□ 0.03
HERC1-209ENST00000560519 ARHGAP23Q9P227 1491 aa15.23■□□□□ 0.03
HERC1-209ENST00000560519 XIRP1Q702N8 1843 aaKnown RBP15.23■□□□□ 0.03
HERC1-209ENST00000560519 HSPA1LP34931 641 aa15.23■□□□□ 0.03
HERC1-209ENST00000560519 KIF15Q9NS87 1388 aa15.21■□□□□ 0.02
HERC1-209ENST00000560519 LMTK2Q8IWU2 1503 aa15.19■□□□□ 0.02
HERC1-209ENST00000560519 EFCAB6Q5THR3 1501 aa15.18■□□□□ 0.02
HERC1-209ENST00000560519 PHF23Q9BUL5 403 aaPredicted RBP15.18■□□□□ 0.02
HERC1-209ENST00000560519 KANK1Q14678 1352 aa15.18■□□□□ 0.02
HERC1-209ENST00000560519 DAPK1P53355 1430 aa15.17■□□□□ 0.02
HERC1-209ENST00000560519 ADGRB3O60242 1522 aa15.17■□□□□ 0.02
HERC1-209ENST00000560519 ABCC5O15440 1437 aa15.15■□□□□ 0.02
HERC1-209ENST00000560519 EID1Q9Y6B2 187 aa15.14■□□□□ 0.01
HERC1-209ENST00000560519 FGD6Q6ZV73 1430 aa15.14■□□□□ 0.01
HERC1-209ENST00000560519 NWD1Q149M9 1564 aa15.14■□□□□ 0.01
HERC1-209ENST00000560519 KANK4Q5T7N3 995 aaPredicted RBP15.12■□□□□ 0.01
HERC1-209ENST00000560519 NKTRP30414 1462 aaKnown RBP15.12■□□□□ 0.01
HERC1-209ENST00000560519 GCC2Q8IWJ2 1684 aa15.12■□□□□ 0.01
HERC1-209ENST00000560519 ANKRD30AQ9BXX3 1397 aa15.11■□□□□ 0.01
HERC1-209ENST00000560519 TMEM2Q9UHN6 1383 aa15.11■□□□□ 0.01
HERC1-209ENST00000560519 APLP2Q06481 763 aa15.11■□□□□ 0.01
HERC1-209ENST00000560519 ROBO1Q9Y6N7 1651 aa15.11■□□□□ 0.01
HERC1-209ENST00000560519 TET3O43151 1660 aa15.1■□□□□ 0.01
HERC1-209ENST00000560519 ADGRL2O95490 1459 aa15.1■□□□□ 0.01
HERC1-209ENST00000560519 RPRD2Q5VT52 1461 aaKnown RBP15.1■□□□□ 0.01
HERC1-209ENST00000560519 TXNDC2Q86VQ3 553 aa15.1■□□□□ 0.01
HERC1-209ENST00000560519 STAG3Q9UJ98 1225 aa15.09■□□□□ 0.01
HERC1-209ENST00000560519 MYO5BQ9ULV0 1848 aa15.08■□□□□ 0.01
HERC1-209ENST00000560519 RRP7BPQ9NSQ0 103 aa15.08■□□□□ 0
HERC1-209ENST00000560519 NOS1P29475 1434 aa15.07■□□□□ 0
HERC1-209ENST00000560519 LTKP29376 864 aa15.06■□□□□ 0
HERC1-209ENST00000560519 FAM135BQ49AJ0 1406 aa15.06■□□□□ 0
HERC1-209ENST00000560519 UNC13BO14795 1591 aa15.06■□□□□ 0
HERC1-209ENST00000560519 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.05■□□□□ -01e-7■■□□□ 13.9
HERC1-209ENST00000560519 PHLPP1O60346 1717 aa15.05■□□□□ -0
HERC1-209ENST00000560519 CHD2O14647 1828 aaKnown RBP15.05■□□□□ -0
HERC1-209ENST00000560519 DIP2AQ14689 1571 aa15.03■□□□□ -0
HERC1-209ENST00000560519 TMEM131LA2VDJ0 1609 aa15.03■□□□□ -0
HERC1-209ENST00000560519 TMEM94Q12767 1356 aa15.02■□□□□ -0
HERC1-209ENST00000560519 SENP3Q9H4L4 574 aaPredicted RBP15.02■□□□□ -0
HERC1-209ENST00000560519 LOC105371045A0A1W2PR82 267 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms