RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 ATXN8OSP0DMR3 200 aa11.46□□□□□ -0.57
HERC1-208ENST00000560462 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.45□□□□□ -0.58
HERC1-208ENST00000560462 NUTM2BA6NNL0 878 aaPredicted RBP11.45□□□□□ -0.58
HERC1-208ENST00000560462 NUTM2EB1AL46 878 aaPredicted RBP11.45□□□□□ -0.58
HERC1-208ENST00000560462 YY1P25490 414 aa11.45□□□□□ -0.58
HERC1-208ENST00000560462 NUTM2DQ5VT03 806 aaPredicted RBP11.45□□□□□ -0.58
HERC1-208ENST00000560462 NUTM2AQ8IVF1 878 aaPredicted RBP11.45□□□□□ -0.58
HERC1-208ENST00000560462 STRCP1A6NGW2 1772 aa11.45□□□□□ -0.58
HERC1-208ENST00000560462 MLH3Q9UHC1 1453 aa11.44□□□□□ -0.58
HERC1-208ENST00000560462 HOXD11P31277 338 aaPredicted RBP11.44□□□□□ -0.58
HERC1-208ENST00000560462 MED14O60244 1454 aa11.44□□□□□ -0.58
HERC1-208ENST00000560462 LRP5O75197 1615 aa11.42□□□□□ -0.58
HERC1-208ENST00000560462 LRP6O75581 1613 aa11.42□□□□□ -0.58
HERC1-208ENST00000560462 ROBO1Q9Y6N7 1651 aa11.42□□□□□ -0.58
HERC1-208ENST00000560462 RGS12O14924 1447 aa11.42□□□□□ -0.58
HERC1-208ENST00000560462 ATAD2Q6PL18 1390 aa11.41□□□□□ -0.58
HERC1-208ENST00000560462 CLTCQ00610 1675 aaKnown RBP11.41□□□□□ -0.58
HERC1-208ENST00000560462 SPATA31A6Q5VVP1 1343 aa11.4□□□□□ -0.58
HERC1-208ENST00000560462 DEPDC5O75140 1603 aa11.39□□□□□ -0.59
HERC1-208ENST00000560462 SENP3-EIF4A1A0A087X0R7 540 aa11.39□□□□□ -0.59
HERC1-208ENST00000560462 SLC4A2P04920 1241 aa11.39□□□□□ -0.59
HERC1-208ENST00000560462 IQGAP1P46940 1657 aa11.39□□□□□ -0.59
HERC1-208ENST00000560462 THEMISQ8N1K5 641 aaPredicted RBP11.38□□□□□ -0.59
HERC1-208ENST00000560462 ABCC1P33527 1531 aa11.38□□□□□ -0.59
HERC1-208ENST00000560462 PHLPP1O60346 1717 aa11.36□□□□□ -0.59
HERC1-208ENST00000560462 MYCNP04198 464 aaPredicted RBP11.35□□□□□ -0.59
HERC1-208ENST00000560462 KDM5DQ9BY66 1539 aa11.35□□□□□ -0.59
HERC1-208ENST00000560462 LRRC9Q6ZRR7 1453 aa11.34□□□□□ -0.59
HERC1-208ENST00000560462 TNRQ92752 1358 aa11.34□□□□□ -0.59
HERC1-208ENST00000560462 RBM6P78332 1123 aaKnown RBP11.34□□□□□ -0.59
HERC1-208ENST00000560462 MYO5CQ9NQX4 1742 aa11.34□□□□□ -0.59
HERC1-208ENST00000560462 ITSN2Q9NZM3 1697 aa11.33□□□□□ -0.6
HERC1-208ENST00000560462 CCDC125Q86Z20 511 aa11.33□□□□□ -0.6
HERC1-208ENST00000560462 ARHGAP5Q13017 1502 aa11.33□□□□□ -0.6
HERC1-208ENST00000560462 EP400Q96L91 3159 aa11.33□□□□□ -0.6
HERC1-208ENST00000560462 FGD6Q6ZV73 1430 aa11.33□□□□□ -0.6
HERC1-208ENST00000560462 AFF2P51816 1311 aa11.33□□□□□ -0.6
HERC1-208ENST00000560462 XIRP1Q702N8 1843 aaKnown RBP11.32□□□□□ -0.6
HERC1-208ENST00000560462 FAM135AQ9P2D6 1515 aa11.32□□□□□ -0.6
HERC1-208ENST00000560462 FKBP8Q14318 412 aa11.3□□□□□ -0.6
HERC1-208ENST00000560462 GGT6Q6P531 493 aa11.3□□□□□ -0.6
HERC1-208ENST00000560462 QTRT2Q9H974 415 aaKnown RBP11.3□□□□□ -0.6
HERC1-208ENST00000560462 KIDINS220Q9ULH0 1771 aa11.3□□□□□ -0.6
HERC1-208ENST00000560462 UGGT1Q9NYU2 1555 aa11.29□□□□□ -0.6
HERC1-208ENST00000560462 COL16A1Q07092 1604 aaPredicted RBP11.29□□□□□ -0.6
HERC1-208ENST00000560462 TMEM94Q12767 1356 aa11.28□□□□□ -0.6
HERC1-208ENST00000560462 SAMD9Q5K651 1589 aa11.28□□□□□ -0.6
HERC1-208ENST00000560462 FBXO31Q5XUX0 539 aaPredicted RBP11.28□□□□□ -0.6
HERC1-208ENST00000560462 NGLY1Q96IV0 654 aa11.28□□□□□ -0.6
HERC1-208ENST00000560462 NHSL1Q5SYE7 1610 aa11.27□□□□□ -0.61
HERC1-208ENST00000560462 NLRP1Q9C000 1473 aa11.26□□□□□ -0.61
HERC1-208ENST00000560462 ATP7AQ04656 1500 aa11.26□□□□□ -0.61
HERC1-208ENST00000560462 SLAIN2Q9P270 581 aa11.26□□□□□ -0.61
HERC1-208ENST00000560462 ZC3H13Q5T200 1668 aaKnown RBP11.25□□□□□ -0.61
HERC1-208ENST00000560462 NWD1Q149M9 1564 aa11.24□□□□□ -0.61
HERC1-208ENST00000560462 SHPRHQ149N8 1683 aa11.24□□□□□ -0.61
HERC1-208ENST00000560462 HRCP23327 699 aa11.23□□□□□ -0.61
HERC1-208ENST00000560462 PLXNC1O60486 1568 aa11.22□□□□□ -0.61
HERC1-208ENST00000560462 MAP3K1Q13233 1512 aa11.22□□□□□ -0.61
HERC1-208ENST00000560462 MIA2Q96PC5 1412 aa11.22□□□□□ -0.61
HERC1-208ENST00000560462 CEP350Q5VT06 3117 aa11.22□□□□□ -0.61
HERC1-208ENST00000560462 KIF14Q15058 1648 aa11.21□□□□□ -0.61
HERC1-208ENST00000560462 C8orf37Q96NL8 207 aa11.21□□□□□ -0.61
HERC1-208ENST00000560462 A2MP01023 1474 aa11.2□□□□□ -0.62
HERC1-208ENST00000560462 PZPP20742 1482 aa11.2□□□□□ -0.62
HERC1-208ENST00000560462 MSH6P52701 1360 aa11.2□□□□□ -0.62
HERC1-208ENST00000560462 PSDA5PKW4 1024 aaPredicted RBP11.2□□□□□ -0.62
HERC1-208ENST00000560462 SUPT5HO00267 1087 aaKnown RBP11.2□□□□□ -0.62
HERC1-208ENST00000560462 C1QTNF8P60827 252 aa11.2□□□□□ -0.62
HERC1-208ENST00000560462 PROSER2Q86WR7 435 aaPredicted RBP11.2□□□□□ -0.62
HERC1-208ENST00000560462 SPAG9O60271 1321 aaKnown RBP11.19□□□□□ -0.62
HERC1-208ENST00000560462 SAMD9LQ8IVG5 1584 aa11.18□□□□□ -0.62
HERC1-208ENST00000560462 SCAF11Q99590 1463 aaKnown RBP11.18□□□□□ -0.62
HERC1-208ENST00000560462 DEFB132Q7Z7B7 95 aa11.17□□□□□ -0.62
HERC1-208ENST00000560462 BLMP54132 1417 aaPredicted RBP11.17□□□□□ -0.62
HERC1-208ENST00000560462 ZNF784Q8NCA9 323 aaPredicted RBP11.16□□□□□ -0.62
HERC1-208ENST00000560462 CDK11AQ9UQ88 783 aaPredicted RBP11.16□□□□□ -0.62
HERC1-208ENST00000560462 PRXQ9BXM0 1461 aa11.16□□□□□ -0.62
HERC1-208ENST00000560462 TIAM1Q13009 1591 aa11.16□□□□□ -0.62
HERC1-208ENST00000560462 BCL9LQ86UU0 1499 aa11.15□□□□□ -0.62
HERC1-208ENST00000560462 PRDM15P57071 1507 aaPredicted RBP11.14□□□□□ -0.63
HERC1-208ENST00000560462 AHDC1Q5TGY3 1603 aaPredicted RBP11.14□□□□□ -0.63
HERC1-208ENST00000560462 DCAF8L1A6NGE4 600 aa11.14□□□□□ -0.63
HERC1-208ENST00000560462 KCNA6P17658 529 aa11.14□□□□□ -0.63
HERC1-208ENST00000560462 CDC42BPBQ9Y5S2 1711 aa11.14□□□□□ -0.63
HERC1-208ENST00000560462 ABCC3O15438 1527 aa11.14□□□□□ -0.63
HERC1-208ENST00000560462 SF3B2Q13435 895 aaKnown RBP11.13□□□□□ -0.63
HERC1-208ENST00000560462 SLC34A2O95436 690 aa11.12□□□□□ -0.63
HERC1-208ENST00000560462 LTKP29376 864 aa11.12□□□□□ -0.63
HERC1-208ENST00000560462 RANGAP1P46060 587 aaPredicted RBP11.12□□□□□ -0.63
HERC1-208ENST00000560462 TXNDC2Q86VQ3 553 aa11.12□□□□□ -0.63
HERC1-208ENST00000560462 DIP2AQ14689 1571 aa11.11□□□□□ -0.63
HERC1-208ENST00000560462 CLIP1P30622 1438 aa11.11□□□□□ -0.63
HERC1-208ENST00000560462 TRPC5Q9UL62 973 aaPredicted RBP11.11□□□□□ -0.63
HERC1-208ENST00000560462 TROQ12816 1431 aaPredicted RBP11.1□□□□□ -0.63
HERC1-208ENST00000560462 NKTRP30414 1462 aaKnown RBP11.1□□□□□ -0.63
HERC1-208ENST00000560462 PREX2Q70Z35 1606 aa11.09□□□□□ -0.63
HERC1-208ENST00000560462 USP21Q9UK80 565 aa11.09□□□□□ -0.63
HERC1-208ENST00000560462 EID1Q9Y6B2 187 aa11.09□□□□□ -0.63
HERC1-208ENST00000560462 WASHC2CQ9Y4E1 1318 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms