RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 ADGBQ8N7X0 1667 aa22.99■■□□□ 1.27
IDH3A-219ENST00000560414 MIA2Q96PC5 1412 aa22.99■■□□□ 1.27
IDH3A-219ENST00000560414 ARHGEF5Q12774 1597 aa22.98■■□□□ 1.27
IDH3A-219ENST00000560414 DHX29Q7Z478 1369 aaKnown RBP22.98■■□□□ 1.27
IDH3A-219ENST00000560414 CNTLNQ9NXG0 1405 aa22.97■■□□□ 1.27
IDH3A-219ENST00000560414 C3P01024 1663 aa22.97■■□□□ 1.27
IDH3A-219ENST00000560414 ZMYM3Q14202 1370 aa22.93■■□□□ 1.26
IDH3A-219ENST00000560414 KIF3BO15066 747 aa22.93■■□□□ 1.26
IDH3A-219ENST00000560414 PREX1Q8TCU6 1659 aa22.9■■□□□ 1.26
IDH3A-219ENST00000560414 SETD1BQ9UPS6 1966 aaKnown RBP22.9■■□□□ 1.26
IDH3A-219ENST00000560414 UHRF1BP1Q6BDS2 1440 aa22.9■■□□□ 1.26
IDH3A-219ENST00000560414 CLTCQ00610 1675 aaKnown RBP22.89■■□□□ 1.25
IDH3A-219ENST00000560414 PTPN23Q9H3S7 1636 aa22.87■■□□□ 1.25
IDH3A-219ENST00000560414 FGD6Q6ZV73 1430 aa22.87■■□□□ 1.25
IDH3A-219ENST00000560414 MROH2AA6NES4 1674 aa22.87■■□□□ 1.25
IDH3A-219ENST00000560414 MAST1Q9Y2H9 1570 aa22.86■■□□□ 1.25
IDH3A-219ENST00000560414 ATXN8OSP0DMR3 200 aa22.86■■□□□ 1.25
IDH3A-219ENST00000560414 ABCC5O15440 1437 aa22.84■■□□□ 1.25
IDH3A-219ENST00000560414 NPATQ14207 1427 aa22.82■■□□□ 1.24
IDH3A-219ENST00000560414 TCOF1Q13428 1488 aaKnown RBP22.81■■□□□ 1.24
IDH3A-219ENST00000560414 SAMD1Q6SPF0 538 aaPredicted RBP22.81■■□□□ 1.24
IDH3A-219ENST00000560414 PTPRKQ15262 1439 aa22.8■■□□□ 1.24
IDH3A-219ENST00000560414 WASHC2CQ9Y4E1 1318 aa22.8■■□□□ 1.24
IDH3A-219ENST00000560414 DAPK1P53355 1430 aa22.79■■□□□ 1.24
IDH3A-219ENST00000560414 ILDR1Q86SU0 546 aaPredicted RBP22.78■■□□□ 1.24
IDH3A-219ENST00000560414 RRP7BPQ9NSQ0 103 aa22.78■■□□□ 1.24
IDH3A-219ENST00000560414 CHIC2Q9UKJ5 165 aa22.77■■□□□ 1.24
IDH3A-219ENST00000560414 FAM50AQ14320 339 aaKnown RBP22.76■■□□□ 1.23
IDH3A-219ENST00000560414 PPARGC1BQ86YN6 1023 aaKnown RBP22.76■■□□□ 1.23
IDH3A-219ENST00000560414 SHANK2Q9UPX8 1470 aa22.76■■□□□ 1.23
IDH3A-219ENST00000560414 KIF15Q9NS87 1388 aa22.76■■□□□ 1.23
IDH3A-219ENST00000560414 DNMT1P26358 1616 aaKnown RBP22.75■■□□□ 1.23
IDH3A-219ENST00000560414 FBXO31Q5XUX0 539 aaPredicted RBP22.75■■□□□ 1.23
IDH3A-219ENST00000560414 KDM5DQ9BY66 1539 aa22.75■■□□□ 1.23
IDH3A-219ENST00000560414 CROCC2H7BZ55 1655 aa22.74■■□□□ 1.23
IDH3A-219ENST00000560414 DUOX2Q9NRD8 1548 aa22.73■■□□□ 1.23
IDH3A-219ENST00000560414 STRCQ7RTU9 1775 aa22.73■■□□□ 1.23
IDH3A-219ENST00000560414 RNF17Q9BXT8 1623 aaKnown RBP22.71■■□□□ 1.23
IDH3A-219ENST00000560414 RNF39Q9H2S5 420 aa22.7■■□□□ 1.22
IDH3A-219ENST00000560414 FAM135AQ9P2D6 1515 aa22.7■■□□□ 1.22
IDH3A-219ENST00000560414 EIF2AK4Q9P2K8 1649 aaKnown RBP22.7■■□□□ 1.22
IDH3A-219ENST00000560414 MYO3AQ8NEV4 1616 aa22.69■■□□□ 1.22
IDH3A-219ENST00000560414 PZPP20742 1482 aa22.69■■□□□ 1.22
IDH3A-219ENST00000560414 ANKRD30AQ9BXX3 1397 aa22.68■■□□□ 1.22
IDH3A-219ENST00000560414 CAMSAP1Q5T5Y3 1602 aa22.67■■□□□ 1.22
IDH3A-219ENST00000560414 MROH1Q8NDA8 1641 aa22.67■■□□□ 1.22
IDH3A-219ENST00000560414 ABCC3O15438 1527 aa22.67■■□□□ 1.22
IDH3A-219ENST00000560414 NCOA1Q15788 1441 aa22.66■■□□□ 1.22
IDH3A-219ENST00000560414 TNRQ92752 1358 aa22.66■■□□□ 1.22
IDH3A-219ENST00000560414 ERBINQ96RT1 1412 aa22.65■■□□□ 1.22
IDH3A-219ENST00000560414 CEP170BQ9Y4F5 1589 aaPredicted RBP22.65■■□□□ 1.22
IDH3A-219ENST00000560414 NCKAP5LQ9HCH0 1330 aa22.63■■□□□ 1.21
IDH3A-219ENST00000560414 ZNF142P52746 1687 aaPredicted RBP22.63■■□□□ 1.21
IDH3A-219ENST00000560414 A2ML1A8K2U0 1454 aa22.61■■□□□ 1.21
IDH3A-219ENST00000560414 PTPRTO14522 1441 aa22.61■■□□□ 1.21
IDH3A-219ENST00000560414 ZC3H13Q5T200 1668 aaKnown RBP22.6■■□□□ 1.21
IDH3A-219ENST00000560414 ADGRL2O95490 1459 aa22.6■■□□□ 1.21
IDH3A-219ENST00000560414 CEP152O94986 1710 aa22.6■■□□□ 1.21
IDH3A-219ENST00000560414 CERKQ8TCT0 537 aa22.58■■□□□ 1.21
IDH3A-219ENST00000560414 FBXO41Q8TF61 875 aa22.58■■□□□ 1.21
IDH3A-219ENST00000560414 PRDM15P57071 1507 aaPredicted RBP22.57■■□□□ 1.2
IDH3A-219ENST00000560414 PLA2R1Q13018 1463 aa22.56■■□□□ 1.2
IDH3A-219ENST00000560414 PKD2Q13563 968 aa22.56■■□□□ 1.2
IDH3A-219ENST00000560414 ITGAEP38570 1179 aa22.55■■□□□ 1.2
IDH3A-219ENST00000560414 ATF5Q9Y2D1 282 aaPredicted RBP22.55■■□□□ 1.2
IDH3A-219ENST00000560414 ERVK-7P63135 1459 aa22.54■■□□□ 1.2
IDH3A-219ENST00000560414 DEPDC5O75140 1603 aa22.54■■□□□ 1.2
IDH3A-219ENST00000560414 KANK1Q14678 1352 aa22.54■■□□□ 1.2
IDH3A-219ENST00000560414 CFAP65Q6ZU64 1925 aaKnown RBP22.54■■□□□ 1.2
IDH3A-219ENST00000560414 SPATA31D1Q6ZQQ2 1576 aa22.54■■□□□ 1.2
IDH3A-219ENST00000560414 NLRP1Q9C000 1473 aa22.53■■□□□ 1.2
IDH3A-219ENST00000560414 ANKRD50Q9ULJ7 1429 aa22.52■■□□□ 1.2
IDH3A-219ENST00000560414 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.5■■□□□ 1.19
IDH3A-219ENST00000560414 THEMISQ8N1K5 641 aaPredicted RBP22.5■■□□□ 1.19
IDH3A-219ENST00000560414 ARHGAP31Q2M1Z3 1444 aa22.49■■□□□ 1.19
IDH3A-219ENST00000560414 UGGT1Q9NYU2 1555 aa22.49■■□□□ 1.19
IDH3A-219ENST00000560414 VWDEQ8N2E2 1590 aa22.47■■□□□ 1.19
IDH3A-219ENST00000560414 C1QBPQ07021 282 aaKnown RBP22.47■■□□□ 1.19
IDH3A-219ENST00000560414 ROCK1Q13464 1354 aa22.46■■□□□ 1.19
IDH3A-219ENST00000560414 ANKLE2Q86XL3 938 aa22.45■■□□□ 1.18
IDH3A-219ENST00000560414 ZNF335Q9H4Z2 1342 aaPredicted RBP22.45■■□□□ 1.18
IDH3A-219ENST00000560414 LMTK2Q8IWU2 1503 aa22.45■■□□□ 1.18
IDH3A-219ENST00000560414 LTBP4Q8N2S1 1624 aa22.44■■□□□ 1.18
IDH3A-219ENST00000560414 NEURL4Q96JN8 1562 aa22.42■■□□□ 1.18
IDH3A-219ENST00000560414 RRBP1Q9P2E9 1410 aaKnown RBP22.4■■□□□ 1.18
IDH3A-219ENST00000560414 POLR1AO95602 1720 aaPredicted RBP22.4■■□□□ 1.18
IDH3A-219ENST00000560414 EFCAB6Q5THR3 1501 aa22.38■■□□□ 1.17
IDH3A-219ENST00000560414 IDI1Q13907 227 aa22.37■■□□□ 1.17
IDH3A-219ENST00000560414 UBR1Q8IWV7 1749 aa22.37■■□□□ 1.17
IDH3A-219ENST00000560414 NPHP4O75161 1426 aaPredicted RBP22.36■■□□□ 1.17
IDH3A-219ENST00000560414 NOS1P29475 1434 aa22.35■■□□□ 1.17
IDH3A-219ENST00000560414 UNC13BO14795 1591 aa22.34■■□□□ 1.17
IDH3A-219ENST00000560414 STAG3Q9UJ98 1225 aa22.34■■□□□ 1.17
IDH3A-219ENST00000560414 PIK3C2BO00750 1634 aa22.34■■□□□ 1.17
IDH3A-219ENST00000560414 MED14O60244 1454 aa22.34■■□□□ 1.17
IDH3A-219ENST00000560414 SYNMO15061 1565 aa22.33■■□□□ 1.17
IDH3A-219ENST00000560414 LTKP29376 864 aa22.33■■□□□ 1.17
IDH3A-219ENST00000560414 TXNDC2Q86VQ3 553 aa22.32■■□□□ 1.16
IDH3A-219ENST00000560414 NUP155O75694 1391 aa22.31■■□□□ 1.16
IDH3A-219ENST00000560414 TET3O43151 1660 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms