RNA–Protein interactions for RNA: ENST00000560320.1

CRTC3-209, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-209ENST00000560320 TIMELESSQ9UNS1 1208 aa15.38■□□□□ 0.05
CRTC3-209ENST00000560320 DENND4BO75064 1496 aaPredicted RBP15.38■□□□□ 0.05
CRTC3-209ENST00000560320 NUP155O75694 1391 aa15.37■□□□□ 0.05
CRTC3-209ENST00000560320 UNC13BO14795 1591 aa15.37■□□□□ 0.05
CRTC3-209ENST00000560320 POGZQ7Z3K3 1410 aa15.37■□□□□ 0.05
CRTC3-209ENST00000560320 PZPP20742 1482 aa15.36■□□□□ 0.05
CRTC3-209ENST00000560320 KIDINS220Q9ULH0 1771 aa15.36■□□□□ 0.05
CRTC3-209ENST00000560320 KDM5CP41229 1560 aa15.36■□□□□ 0.05
CRTC3-209ENST00000560320 EIF2AK4Q9P2K8 1649 aaKnown RBP15.35■□□□□ 0.05
CRTC3-209ENST00000560320 SIN3AQ96ST3 1273 aa15.34■□□□□ 0.05
CRTC3-209ENST00000560320 TONSLQ96HA7 1378 aa15.34■□□□□ 0.05
CRTC3-209ENST00000560320 RICTORQ6R327 1708 aa15.34■□□□□ 0.05
CRTC3-209ENST00000560320 RIMS1Q86UR5 1692 aaKnown RBP15.33■□□□□ 0.04
CRTC3-209ENST00000560320 MLH3Q9UHC1 1453 aa15.33■□□□□ 0.04
CRTC3-209ENST00000560320 IQGAP3Q86VI3 1631 aa15.32■□□□□ 0.04
CRTC3-209ENST00000560320 FAM135AQ9P2D6 1515 aa15.31■□□□□ 0.04
CRTC3-209ENST00000560320 PKD2Q13563 968 aa15.3■□□□□ 0.04
CRTC3-209ENST00000560320 KANK1Q14678 1352 aa15.3■□□□□ 0.04
CRTC3-209ENST00000560320 DHX29Q7Z478 1369 aaKnown RBP15.3■□□□□ 0.04
CRTC3-209ENST00000560320 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.3■□□□□ 0.04
CRTC3-209ENST00000560320 DEPDC5O75140 1603 aa15.28■□□□□ 0.04
CRTC3-209ENST00000560320 A2MP01023 1474 aa15.28■□□□□ 0.04
CRTC3-209ENST00000560320 MAGI2Q86UL8 1455 aa15.28■□□□□ 0.04
CRTC3-209ENST00000560320 ANKRD30BQ9BXX2 1392 aa15.28■□□□□ 0.04
CRTC3-209ENST00000560320 FOXD1Q16676 465 aa15.27■□□□□ 0.04
CRTC3-209ENST00000560320 ABCA6Q8N139 1617 aa15.27■□□□□ 0.03
CRTC3-209ENST00000560320 KIF3BO15066 747 aa15.25■□□□□ 0.03
CRTC3-209ENST00000560320 RAPGEF3O95398 923 aa15.25■□□□□ 0.03
CRTC3-209ENST00000560320 ZMYM4Q5VZL5 1548 aa15.25■□□□□ 0.03
CRTC3-209ENST00000560320 TET3O43151 1660 aa15.23■□□□□ 0.03
CRTC3-209ENST00000560320 RPRD2Q5VT52 1461 aaKnown RBP15.23■□□□□ 0.03
CRTC3-209ENST00000560320 RNF17Q9BXT8 1623 aaKnown RBP15.23■□□□□ 0.03
CRTC3-209ENST00000560320 FRMPD1Q5SYB0 1578 aa15.23■□□□□ 0.03
CRTC3-209ENST00000560320 DIP2CQ9Y2E4 1556 aa15.23■□□□□ 0.03
CRTC3-209ENST00000560320 ZNF316A6NFI3 1004 aaPredicted RBP15.21■□□□□ 0.03
CRTC3-209ENST00000560320 PPP1R15AO75807 674 aaPredicted RBP15.21■□□□□ 0.03
CRTC3-209ENST00000560320 PRDM15P57071 1507 aaPredicted RBP15.21■□□□□ 0.03
CRTC3-209ENST00000560320 STRCQ7RTU9 1775 aa15.21■□□□□ 0.02
CRTC3-209ENST00000560320 VWDEQ8N2E2 1590 aa15.19■□□□□ 0.02
CRTC3-209ENST00000560320 ARID4BQ4LE39 1312 aaPredicted RBP15.18■□□□□ 0.02
CRTC3-209ENST00000560320 CEP152O94986 1710 aa15.18■□□□□ 0.02
CRTC3-209ENST00000560320 E9PCH4 1651 aa15.18■□□□□ 0.02
CRTC3-209ENST00000560320 SPHKAPQ2M3C7 1700 aa15.17■□□□□ 0.02
CRTC3-209ENST00000560320 MROH1Q8NDA8 1641 aa15.17■□□□□ 0.02
CRTC3-209ENST00000560320 CCDC144AA2RUR9 1427 aa15.17■□□□□ 0.02
CRTC3-209ENST00000560320 YEATS2Q9ULM3 1422 aa15.17■□□□□ 0.02
CRTC3-209ENST00000560320 ATP10AO60312 1499 aa15.16■□□□□ 0.02
CRTC3-209ENST00000560320 IQSEC2Q5JU85 1478 aa15.16■□□□□ 0.02
CRTC3-209ENST00000560320 PREX1Q8TCU6 1659 aa15.15■□□□□ 0.02
CRTC3-209ENST00000560320 ZC3H13Q5T200 1668 aaKnown RBP15.14■□□□□ 0.01
CRTC3-209ENST00000560320 PLPPR3Q6T4P5 718 aa15.14■□□□□ 0.01
CRTC3-209ENST00000560320 REREQ9P2R6 1566 aa15.14■□□□□ 0.01
CRTC3-209ENST00000560320 LMTK2Q8IWU2 1503 aa15.13■□□□□ 0.01
CRTC3-209ENST00000560320 GGT6Q6P531 493 aa15.13■□□□□ 0.01
CRTC3-209ENST00000560320 L3MBTL2Q969R5 705 aa15.13■□□□□ 0.01
CRTC3-209ENST00000560320 DMRT2Q9Y5R5 561 aa15.13■□□□□ 0.01
CRTC3-209ENST00000560320 LTBP4Q8N2S1 1624 aa15.13■□□□□ 0.01
CRTC3-209ENST00000560320 ARHGEF40Q8TER5 1519 aa15.12■□□□□ 0.01
CRTC3-209ENST00000560320 MED1Q15648 1581 aaPredicted RBP15.12■□□□□ 0.01
CRTC3-209ENST00000560320 EFCAB6Q5THR3 1501 aa15.12■□□□□ 0.01
CRTC3-209ENST00000560320 CFAP65Q6ZU64 1925 aaKnown RBP15.11■□□□□ 0.01
CRTC3-209ENST00000560320 TRPM2O94759 1503 aa15.1■□□□□ 0.01
CRTC3-209ENST00000560320 CAMSAP1Q5T5Y3 1602 aa15.1■□□□□ 0.01
CRTC3-209ENST00000560320 AGLP35573 1532 aa15.09■□□□□ 0.01
CRTC3-209ENST00000560320 KIF1BO60333 1816 aa15.09■□□□□ 0.01
CRTC3-209ENST00000560320 WASHC2CQ9Y4E1 1318 aa15.09■□□□□ 0.01
CRTC3-209ENST00000560320 FER1L4A9Z1Z3 1794 aa15.08■□□□□ 0.01
CRTC3-209ENST00000560320 ABCC3O15438 1527 aa15.07■□□□□ 0
CRTC3-209ENST00000560320 PTPRTO14522 1441 aa15.07■□□□□ 0
CRTC3-209ENST00000560320 PLA2R1Q13018 1463 aa15.07■□□□□ 0
CRTC3-209ENST00000560320 SIGLEC1Q9BZZ2 1709 aa15.06■□□□□ 0
CRTC3-209ENST00000560320 PPP6R1Q9UPN7 881 aa15.05■□□□□ -0
CRTC3-209ENST00000560320 CLTCL1P53675 1640 aa15.04■□□□□ -0
CRTC3-209ENST00000560320 DIEXFQ68CQ4 756 aaKnown RBP15.02■□□□□ -0
CRTC3-209ENST00000560320 DCAF11Q8TEB1 546 aa15.02■□□□□ -0
CRTC3-209ENST00000560320 CNTLNQ9NXG0 1405 aa15.01□□□□□ -0.01
CRTC3-209ENST00000560320 RGL3Q3MIN7 710 aa15.01□□□□□ -0.01
CRTC3-209ENST00000560320 ZNF326Q5BKZ1 582 aaKnown RBP15.01□□□□□ -0.01
CRTC3-209ENST00000560320 KDM2AQ9Y2K7 1162 aa15.01□□□□□ -0.01
CRTC3-209ENST00000560320 NEURL4Q96JN8 1562 aa15.01□□□□□ -0.01
CRTC3-209ENST00000560320 ARHGAP31Q2M1Z3 1444 aa15□□□□□ -0.01
CRTC3-209ENST00000560320 UHRF1BP1Q6BDS2 1440 aa15□□□□□ -0.01
CRTC3-209ENST00000560320 ESF1Q9H501 851 aaKnown RBP15□□□□□ -0.01
CRTC3-209ENST00000560320 NPATQ14207 1427 aa15□□□□□ -0.01
CRTC3-209ENST00000560320 CLTCQ00610 1675 aaKnown RBP15□□□□□ -0.01
CRTC3-209ENST00000560320 EIF4G2P78344 907 aaKnown RBP eCLIP14.99□□□□□ -0.01
CRTC3-209ENST00000560320 STAC3Q96MF2 364 aa14.99□□□□□ -0.01
CRTC3-209ENST00000560320 NBPF8Q3BBV2 869 aa14.98□□□□□ -0.01
CRTC3-209ENST00000560320 RALGAPBQ86X10 1494 aa14.96□□□□□ -0.01
CRTC3-209ENST00000560320 UBAP1LF5GYI3 381 aa14.96□□□□□ -0.01
CRTC3-209ENST00000560320 SPATA31E1Q6ZUB1 1445 aa14.96□□□□□ -0.01
CRTC3-209ENST00000560320 MLECQ14165 292 aa14.95□□□□□ -0.02
CRTC3-209ENST00000560320 TRPM1Q7Z4N2 1603 aa14.95□□□□□ -0.02
CRTC3-209ENST00000560320 NOS1P29475 1434 aa14.94□□□□□ -0.02
CRTC3-209ENST00000560320 MROH2AA6NES4 1674 aa14.93□□□□□ -0.02
CRTC3-209ENST00000560320 PRAG1Q86YV5 1406 aa14.93□□□□□ -0.02
CRTC3-209ENST00000560320 SETD1BQ9UPS6 1966 aaKnown RBP14.93□□□□□ -0.02
CRTC3-209ENST00000560320 CHGAP10645 457 aaKnown RBP14.93□□□□□ -0.02
CRTC3-209ENST00000560320 HSPA5P11021 654 aaKnown RBP14.93□□□□□ -0.02
CRTC3-209ENST00000560320 UGGT1Q9NYU2 1555 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms