RNA–Protein interactions for RNA: ENST00000560314.1

LINC02253-202, Transcript of long intergenic non-protein coding RNA 2253, humanhuman

TSL 5 BASIC

Gene LINC02253, Length 565 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02253-202ENST00000560314 DNMT1P26358 1616 aaKnown RBP17.87■□□□□ 0.45
LINC02253-202ENST00000560314 POLR1AO95602 1720 aaPredicted RBP17.86■□□□□ 0.45
LINC02253-202ENST00000560314 PZPP20742 1482 aa17.85■□□□□ 0.45
LINC02253-202ENST00000560314 SPATA31D1Q6ZQQ2 1576 aa17.84■□□□□ 0.45
LINC02253-202ENST00000560314 NCKAP5LQ9HCH0 1330 aa17.84■□□□□ 0.45
LINC02253-202ENST00000560314 DISP3Q9P2K9 1392 aa17.82■□□□□ 0.44
LINC02253-202ENST00000560314 ZNF335Q9H4Z2 1342 aaPredicted RBP17.82■□□□□ 0.44
LINC02253-202ENST00000560314 VPS8Q8N3P4 1428 aa17.81■□□□□ 0.44
LINC02253-202ENST00000560314 ZC3H13Q5T200 1668 aaKnown RBP17.8■□□□□ 0.44
LINC02253-202ENST00000560314 TNRQ92752 1358 aa17.8■□□□□ 0.44
LINC02253-202ENST00000560314 MAST1Q9Y2H9 1570 aa17.8■□□□□ 0.44
LINC02253-202ENST00000560314 KIF3BO15066 747 aa17.8■□□□□ 0.44
LINC02253-202ENST00000560314 LRRC9Q6ZRR7 1453 aa17.8■□□□□ 0.44
LINC02253-202ENST00000560314 RNF17Q9BXT8 1623 aaKnown RBP17.8■□□□□ 0.44
LINC02253-202ENST00000560314 NLRP1Q9C000 1473 aa17.79■□□□□ 0.44
LINC02253-202ENST00000560314 EIF2AK4Q9P2K8 1649 aaKnown RBP17.79■□□□□ 0.44
LINC02253-202ENST00000560314 MAP3K1Q13233 1512 aa17.78■□□□□ 0.44
LINC02253-202ENST00000560314 NEURL4Q96JN8 1562 aa17.78■□□□□ 0.44
LINC02253-202ENST00000560314 TSPY4P0CV99 314 aa17.77■□□□□ 0.44
LINC02253-202ENST00000560314 TSPY10P0CW01 314 aa17.77■□□□□ 0.44
LINC02253-202ENST00000560314 WASHC2CQ9Y4E1 1318 aa17.76■□□□□ 0.43
LINC02253-202ENST00000560314 CPS1P31327 1500 aa17.76■□□□□ 0.43
LINC02253-202ENST00000560314 DEPDC5O75140 1603 aa17.75■□□□□ 0.43
LINC02253-202ENST00000560314 MIA2Q96PC5 1412 aa17.74■□□□□ 0.43
LINC02253-202ENST00000560314 UGGT1Q9NYU2 1555 aa17.74■□□□□ 0.43
LINC02253-202ENST00000560314 ABCC3O15438 1527 aa17.72■□□□□ 0.43
LINC02253-202ENST00000560314 UBAP1LF5GYI3 381 aa17.72■□□□□ 0.43
LINC02253-202ENST00000560314 FBXO31Q5XUX0 539 aaPredicted RBP17.72■□□□□ 0.43
LINC02253-202ENST00000560314 MED14O60244 1454 aa17.71■□□□□ 0.43
LINC02253-202ENST00000560314 MYOM3Q5VTT5 1437 aa17.71■□□□□ 0.43
LINC02253-202ENST00000560314 THEMISQ8N1K5 641 aaPredicted RBP17.7■□□□□ 0.42
LINC02253-202ENST00000560314 SHANK2Q9UPX8 1470 aa17.69■□□□□ 0.42
LINC02253-202ENST00000560314 MROH1Q8NDA8 1641 aa17.69■□□□□ 0.42
LINC02253-202ENST00000560314 ILDR2Q71H61 639 aa17.69■□□□□ 0.42
LINC02253-202ENST00000560314 ANKLE2Q86XL3 938 aa17.69■□□□□ 0.42
LINC02253-202ENST00000560314 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.68■□□□□ 0.42
LINC02253-202ENST00000560314 DUOX2Q9NRD8 1548 aa17.68■□□□□ 0.42
LINC02253-202ENST00000560314 IQGAP1P46940 1657 aa17.68■□□□□ 0.42
LINC02253-202ENST00000560314 VWDEQ8N2E2 1590 aa17.67■□□□□ 0.42
LINC02253-202ENST00000560314 SOCS7O14512 581 aa17.67■□□□□ 0.42
LINC02253-202ENST00000560314 ERVK-7P63135 1459 aa17.67■□□□□ 0.42
LINC02253-202ENST00000560314 CROCC2H7BZ55 1655 aa17.67■□□□□ 0.42
LINC02253-202ENST00000560314 CEP152O94986 1710 aa17.67■□□□□ 0.42
LINC02253-202ENST00000560314 NPHP4O75161 1426 aaPredicted RBP17.66■□□□□ 0.42
LINC02253-202ENST00000560314 PRDM15P57071 1507 aaPredicted RBP17.65■□□□□ 0.42
LINC02253-202ENST00000560314 SYNMO15061 1565 aa17.63■□□□□ 0.41
LINC02253-202ENST00000560314 ERBINQ96RT1 1412 aa17.63■□□□□ 0.41
LINC02253-202ENST00000560314 UBR1Q8IWV7 1749 aa17.62■□□□□ 0.41
LINC02253-202ENST00000560314 TOM1O60784 492 aa17.62■□□□□ 0.41
LINC02253-202ENST00000560314 KANK4Q5T7N3 995 aaPredicted RBP17.62■□□□□ 0.41
LINC02253-202ENST00000560314 ARHGAP31Q2M1Z3 1444 aa17.61■□□□□ 0.41
LINC02253-202ENST00000560314 PTPN23Q9H3S7 1636 aa17.61■□□□□ 0.41
LINC02253-202ENST00000560314 CFAP65Q6ZU64 1925 aaKnown RBP17.6■□□□□ 0.41
LINC02253-202ENST00000560314 KIF15Q9NS87 1388 aa17.59■□□□□ 0.41
LINC02253-202ENST00000560314 LOC105371045A0A1W2PR82 267 aa17.57■□□□□ 0.4
LINC02253-202ENST00000560314 SLIT1O75093 1534 aa17.57■□□□□ 0.4
LINC02253-202ENST00000560314 SCAF11Q99590 1463 aaKnown RBP17.56■□□□□ 0.4
LINC02253-202ENST00000560314 ABCC5O15440 1437 aa17.56■□□□□ 0.4
LINC02253-202ENST00000560314 STRCP1A6NGW2 1772 aa17.56■□□□□ 0.4
LINC02253-202ENST00000560314 MED1Q15648 1581 aaPredicted RBP17.56■□□□□ 0.4
LINC02253-202ENST00000560314 ARHGAP23Q9P227 1491 aa17.56■□□□□ 0.4
LINC02253-202ENST00000560314 KDM5AP29375 1690 aaKnown RBP17.55■□□□□ 0.4
LINC02253-202ENST00000560314 ALKQ9UM73 1620 aa17.55■□□□□ 0.4
LINC02253-202ENST00000560314 SCAF1Q9H7N4 1312 aaKnown RBP17.55■□□□□ 0.4
LINC02253-202ENST00000560314 DAPK1P53355 1430 aa17.55■□□□□ 0.4
LINC02253-202ENST00000560314 LRRC7Q96NW7 1537 aa17.53■□□□□ 0.4
LINC02253-202ENST00000560314 HSPA1LP34931 641 aa17.53■□□□□ 0.4
LINC02253-202ENST00000560314 PIP4K2BP78356 416 aa17.53■□□□□ 0.4
LINC02253-202ENST00000560314 APLP2Q06481 763 aa17.53■□□□□ 0.4
LINC02253-202ENST00000560314 FGD6Q6ZV73 1430 aa17.53■□□□□ 0.4
LINC02253-202ENST00000560314 KANK1Q14678 1352 aa17.52■□□□□ 0.39
LINC02253-202ENST00000560314 LMTK2Q8IWU2 1503 aa17.52■□□□□ 0.39
LINC02253-202ENST00000560314 PIK3C2BO00750 1634 aa17.5■□□□□ 0.39
LINC02253-202ENST00000560314 ANKRD30AQ9BXX3 1397 aa17.49■□□□□ 0.39
LINC02253-202ENST00000560314 RRP7BPQ9NSQ0 103 aa17.48■□□□□ 0.39
LINC02253-202ENST00000560314 FOXD1Q16676 465 aa17.47■□□□□ 0.39
LINC02253-202ENST00000560314 EFCAB6Q5THR3 1501 aa17.47■□□□□ 0.39
LINC02253-202ENST00000560314 TMEM2Q9UHN6 1383 aa17.46■□□□□ 0.39
LINC02253-202ENST00000560314 EID1Q9Y6B2 187 aa17.46■□□□□ 0.39
LINC02253-202ENST00000560314 ADGRL2O95490 1459 aa17.45■□□□□ 0.38
LINC02253-202ENST00000560314 TXNDC2Q86VQ3 553 aa17.45■□□□□ 0.38
LINC02253-202ENST00000560314 XIRP1Q702N8 1843 aaKnown RBP17.44■□□□□ 0.38
LINC02253-202ENST00000560314 LTKP29376 864 aa17.44■□□□□ 0.38
LINC02253-202ENST00000560314 ADGRB3O60242 1522 aa17.42■□□□□ 0.38
LINC02253-202ENST00000560314 NOS1P29475 1434 aa17.42■□□□□ 0.38
LINC02253-202ENST00000560314 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.42■□□□□ 0.38
LINC02253-202ENST00000560314 STAG3Q9UJ98 1225 aa17.41■□□□□ 0.38
LINC02253-202ENST00000560314 RPRD2Q5VT52 1461 aaKnown RBP17.41■□□□□ 0.38
LINC02253-202ENST00000560314 TET3O43151 1660 aa17.38■□□□□ 0.37
LINC02253-202ENST00000560314 NWD1Q149M9 1564 aa17.37■□□□□ 0.37
LINC02253-202ENST00000560314 NKTRP30414 1462 aaKnown RBP17.37■□□□□ 0.37
LINC02253-202ENST00000560314 IDI1Q13907 227 aa17.36■□□□□ 0.37
LINC02253-202ENST00000560314 SLC52A1Q9NWF4 448 aa17.36■□□□□ 0.37
LINC02253-202ENST00000560314 CHIC2Q9UKJ5 165 aa17.36■□□□□ 0.37
LINC02253-202ENST00000560314 ANKRD50Q9ULJ7 1429 aa17.36■□□□□ 0.37
LINC02253-202ENST00000560314 GCC2Q8IWJ2 1684 aa17.35■□□□□ 0.37
LINC02253-202ENST00000560314 FAM135BQ49AJ0 1406 aa17.34■□□□□ 0.37
LINC02253-202ENST00000560314 UNC13BO14795 1591 aa17.33■□□□□ 0.37
LINC02253-202ENST00000560314 KCNA6P17658 529 aa17.33■□□□□ 0.36
LINC02253-202ENST00000560314 TMEM94Q12767 1356 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms