RNA–Protein interactions for RNA: ENST00000560220.5

KNSTRN-209, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 5

Gene KNSTRN, Length 903 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-209ENST00000560220 RGS12O14924 1447 aa17.04■□□□□ 0.32
KNSTRN-209ENST00000560220 PHLPP1O60346 1717 aa17.04■□□□□ 0.32
KNSTRN-209ENST00000560220 ATAD2Q6PL18 1390 aa17.04■□□□□ 0.32
KNSTRN-209ENST00000560220 LRP5O75197 1615 aa17.03■□□□□ 0.32
KNSTRN-209ENST00000560220 XIRP1Q702N8 1843 aaKnown RBP17.03■□□□□ 0.32
KNSTRN-209ENST00000560220 ITSN2Q9NZM3 1697 aa17.03■□□□□ 0.32
KNSTRN-209ENST00000560220 ARHGAP5Q13017 1502 aa17.01■□□□□ 0.31
KNSTRN-209ENST00000560220 GGT6Q6P531 493 aa17.01■□□□□ 0.31
KNSTRN-209ENST00000560220 TNRQ92752 1358 aa17■□□□□ 0.31
KNSTRN-209ENST00000560220 KIDINS220Q9ULH0 1771 aa17■□□□□ 0.31
KNSTRN-209ENST00000560220 SENP3-EIF4A1A0A087X0R7 540 aa16.98■□□□□ 0.31
KNSTRN-209ENST00000560220 RBM6P78332 1123 aaKnown RBP16.98■□□□□ 0.31
KNSTRN-209ENST00000560220 SAMD9Q5K651 1589 aa16.98■□□□□ 0.31
KNSTRN-209ENST00000560220 FAM135AQ9P2D6 1515 aa16.97■□□□□ 0.31
KNSTRN-209ENST00000560220 KDM5DQ9BY66 1539 aa16.96■□□□□ 0.31
KNSTRN-209ENST00000560220 LRRC9Q6ZRR7 1453 aa16.96■□□□□ 0.31
KNSTRN-209ENST00000560220 AFF2P51816 1311 aa16.96■□□□□ 0.3
KNSTRN-209ENST00000560220 CCDC125Q86Z20 511 aa16.95■□□□□ 0.3
KNSTRN-209ENST00000560220 UGGT1Q9NYU2 1555 aa16.94■□□□□ 0.3
KNSTRN-209ENST00000560220 FBXO31Q5XUX0 539 aaPredicted RBP16.94■□□□□ 0.3
KNSTRN-209ENST00000560220 QTRT2Q9H974 415 aaKnown RBP16.94■□□□□ 0.3
KNSTRN-209ENST00000560220 FGD6Q6ZV73 1430 aa16.93■□□□□ 0.3
KNSTRN-209ENST00000560220 COL16A1Q07092 1604 aaPredicted RBP16.9■□□□□ 0.3
KNSTRN-209ENST00000560220 TMEM94Q12767 1356 aa16.89■□□□□ 0.3
KNSTRN-209ENST00000560220 NGLY1Q96IV0 654 aa16.89■□□□□ 0.29
KNSTRN-209ENST00000560220 SLAIN2Q9P270 581 aa16.89■□□□□ 0.29
KNSTRN-209ENST00000560220 ZC3H13Q5T200 1668 aaKnown RBP16.88■□□□□ 0.29
KNSTRN-209ENST00000560220 NLRP1Q9C000 1473 aa16.86■□□□□ 0.29
KNSTRN-209ENST00000560220 ATP7AQ04656 1500 aa16.85■□□□□ 0.29
KNSTRN-209ENST00000560220 SHPRHQ149N8 1683 aa16.84■□□□□ 0.29
KNSTRN-209ENST00000560220 MIA2Q96PC5 1412 aa16.83■□□□□ 0.28
KNSTRN-209ENST00000560220 KIF14Q15058 1648 aa16.82■□□□□ 0.28
KNSTRN-209ENST00000560220 A2MP01023 1474 aa16.82■□□□□ 0.28
KNSTRN-209ENST00000560220 SPAG9O60271 1321 aaKnown RBP16.82■□□□□ 0.28
KNSTRN-209ENST00000560220 PROSER2Q86WR7 435 aaPredicted RBP16.82■□□□□ 0.28
KNSTRN-209ENST00000560220 RANGAP1P46060 587 aaPredicted RBP16.81■□□□□ 0.28
KNSTRN-209ENST00000560220 CDK11AQ9UQ88 783 aaPredicted RBP16.81■□□□□ 0.28
KNSTRN-209ENST00000560220 CDC42BPBQ9Y5S2 1711 aa16.81■□□□□ 0.28
KNSTRN-209ENST00000560220 PLXNC1O60486 1568 aa16.8■□□□□ 0.28
KNSTRN-209ENST00000560220 PZPP20742 1482 aa16.8■□□□□ 0.28
KNSTRN-209ENST00000560220 C8orf37Q96NL8 207 aa16.79■□□□□ 0.28
KNSTRN-209ENST00000560220 SAMD9LQ8IVG5 1584 aa16.79■□□□□ 0.28
KNSTRN-209ENST00000560220 MAP3K1Q13233 1512 aa16.79■□□□□ 0.28
KNSTRN-209ENST00000560220 PRXQ9BXM0 1461 aa16.79■□□□□ 0.28
KNSTRN-209ENST00000560220 MSH6P52701 1360 aa16.78■□□□□ 0.28
KNSTRN-209ENST00000560220 NHSL1Q5SYE7 1610 aa16.78■□□□□ 0.28
KNSTRN-209ENST00000560220 HRCP23327 699 aa16.78■□□□□ 0.28
KNSTRN-209ENST00000560220 NWD1Q149M9 1564 aa16.77■□□□□ 0.28
KNSTRN-209ENST00000560220 PSDA5PKW4 1024 aaPredicted RBP16.76■□□□□ 0.27
KNSTRN-209ENST00000560220 SCAF11Q99590 1463 aaKnown RBP16.74■□□□□ 0.27
KNSTRN-209ENST00000560220 ATP1B4Q9UN42 357 aaPredicted RBP16.74■□□□□ 0.27
KNSTRN-209ENST00000560220 KCNA6P17658 529 aa16.73■□□□□ 0.27
KNSTRN-209ENST00000560220 TXNDC2Q86VQ3 553 aa16.73■□□□□ 0.27
KNSTRN-209ENST00000560220 EP400Q96L91 3159 aa16.73■□□□□ 0.27
KNSTRN-209ENST00000560220 C1QTNF8P60827 252 aa16.72■□□□□ 0.27
KNSTRN-209ENST00000560220 DEFB132Q7Z7B7 95 aa16.72■□□□□ 0.27
KNSTRN-209ENST00000560220 CLIP1P30622 1438 aa16.7■□□□□ 0.26
KNSTRN-209ENST00000560220 LTKP29376 864 aa16.7■□□□□ 0.26
KNSTRN-209ENST00000560220 PREX2Q70Z35 1606 aa16.69■□□□□ 0.26
KNSTRN-209ENST00000560220 BLMP54132 1417 aaPredicted RBP16.69■□□□□ 0.26
KNSTRN-209ENST00000560220 TROQ12816 1431 aaPredicted RBP16.69■□□□□ 0.26
KNSTRN-209ENST00000560220 TIAM1Q13009 1591 aa16.68■□□□□ 0.26
KNSTRN-209ENST00000560220 AHDC1Q5TGY3 1603 aaPredicted RBP16.68■□□□□ 0.26
KNSTRN-209ENST00000560220 DCAF8L1A6NGE4 600 aa16.68■□□□□ 0.26
KNSTRN-209ENST00000560220 PRDM15P57071 1507 aaPredicted RBP16.68■□□□□ 0.26
KNSTRN-209ENST00000560220 WASHC2CQ9Y4E1 1318 aa16.68■□□□□ 0.26
KNSTRN-209ENST00000560220 SF3B2Q13435 895 aaKnown RBP16.67■□□□□ 0.26
KNSTRN-209ENST00000560220 ZNF777Q9ULD5 760 aaPredicted RBP16.67■□□□□ 0.26
KNSTRN-209ENST00000560220 ABCC3O15438 1527 aa16.66■□□□□ 0.26
KNSTRN-209ENST00000560220 HNRNPMP52272 730 aaKnown RBP eCLIP16.66■□□□□ 0.26
KNSTRN-209ENST00000560220 TRPC5Q9UL62 973 aaPredicted RBP16.66■□□□□ 0.26
KNSTRN-209ENST00000560220 EID1Q9Y6B2 187 aa16.66■□□□□ 0.26
KNSTRN-209ENST00000560220 ZNF784Q8NCA9 323 aaPredicted RBP16.65■□□□□ 0.26
KNSTRN-209ENST00000560220 DIP2AQ14689 1571 aa16.64■□□□□ 0.25
KNSTRN-209ENST00000560220 ADGBQ8N7X0 1667 aa16.62■□□□□ 0.25
KNSTRN-209ENST00000560220 BCL9LQ86UU0 1499 aa16.62■□□□□ 0.25
KNSTRN-209ENST00000560220 EHMT2Q96KQ7 1210 aa16.62■□□□□ 0.25
KNSTRN-209ENST00000560220 USP21Q9UK80 565 aa16.62■□□□□ 0.25
KNSTRN-209ENST00000560220 INO80Q9ULG1 1556 aaPredicted RBP16.62■□□□□ 0.25
KNSTRN-209ENST00000560220 SYCP2Q9BX26 1530 aa16.6■□□□□ 0.25
KNSTRN-209ENST00000560220 UBR1Q8IWV7 1749 aa16.59■□□□□ 0.25
KNSTRN-209ENST00000560220 KIF3BO15066 747 aa16.59■□□□□ 0.25
KNSTRN-209ENST00000560220 NKTRP30414 1462 aaKnown RBP16.59■□□□□ 0.25
KNSTRN-209ENST00000560220 NCOA2Q15596 1464 aa16.59■□□□□ 0.25
KNSTRN-209ENST00000560220 KDM5AP29375 1690 aaKnown RBP16.59■□□□□ 0.25
KNSTRN-209ENST00000560220 ADAMTS2O95450 1211 aa16.58■□□□□ 0.24
KNSTRN-209ENST00000560220 ARHGAP23Q9P227 1491 aa16.58■□□□□ 0.24
KNSTRN-209ENST00000560220 SLIT1O75093 1534 aa16.57■□□□□ 0.24
KNSTRN-209ENST00000560220 LOC105371045A0A1W2PR82 267 aa16.56■□□□□ 0.24
KNSTRN-209ENST00000560220 SLC26A8Q96RN1 970 aa16.56■□□□□ 0.24
KNSTRN-209ENST00000560220 EEA1Q15075 1411 aa16.55■□□□□ 0.24
KNSTRN-209ENST00000560220 LRRC59Q96AG4 307 aaKnown RBP16.55■□□□□ 0.24
KNSTRN-209ENST00000560220 SETD5Q9C0A6 1442 aa16.53■□□□□ 0.24
KNSTRN-209ENST00000560220 DHX29Q7Z478 1369 aaKnown RBP16.53■□□□□ 0.24
KNSTRN-209ENST00000560220 C14orf37Q86TY3 774 aa16.53■□□□□ 0.24
KNSTRN-209ENST00000560220 CADPS2Q86UW7 1296 aa16.53■□□□□ 0.24
KNSTRN-209ENST00000560220 R3HDM1Q15032 1099 aaKnown RBP16.52■□□□□ 0.24
KNSTRN-209ENST00000560220 CDC42BPAQ5VT25 1732 aa16.52■□□□□ 0.24
KNSTRN-209ENST00000560220 ATRNO75882 1429 aa16.52■□□□□ 0.23
KNSTRN-209ENST00000560220 ATF3P18847 181 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms