RNA–Protein interactions for RNA: ENST00000560208.1

CRNDE-209, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-209ENST00000560208 NCOA1Q15788 1441 aa36.2■■■■□ 3.39
CRNDE-209ENST00000560208 ZNF142P52746 1687 aaPredicted RBP36.19■■■■□ 3.38
CRNDE-209ENST00000560208 CAMSAP1Q5T5Y3 1602 aa36.19■■■■□ 3.38
CRNDE-209ENST00000560208 PTPRTO14522 1441 aa36.18■■■■□ 3.38
CRNDE-209ENST00000560208 FGD6Q6ZV73 1430 aa36.17■■■■□ 3.38
CRNDE-209ENST00000560208 CERKQ8TCT0 537 aa36.17■■■■□ 3.38
CRNDE-209ENST00000560208 CEP170BQ9Y4F5 1589 aaPredicted RBP36.16■■■■□ 3.38
CRNDE-209ENST00000560208 ABCC5O15440 1437 aa36.16■■■■□ 3.38
CRNDE-209ENST00000560208 CROCC2H7BZ55 1655 aa36.15■■■■□ 3.38
CRNDE-209ENST00000560208 RNF17Q9BXT8 1623 aaKnown RBP36.15■■■■□ 3.38
CRNDE-209ENST00000560208 FBXO31Q5XUX0 539 aaPredicted RBP36.14■■■■□ 3.38
CRNDE-209ENST00000560208 EIF2AK4Q9P2K8 1649 aaKnown RBP36.14■■■■□ 3.38
CRNDE-209ENST00000560208 PZPP20742 1482 aa36.13■■■■□ 3.37
CRNDE-209ENST00000560208 TCOF1Q13428 1488 aaKnown RBP36.12■■■■□ 3.37
CRNDE-209ENST00000560208 SHANK2Q9UPX8 1470 aa36.11■■■■□ 3.37
CRNDE-209ENST00000560208 DUOX2Q9NRD8 1548 aa36.11■■■■□ 3.37
CRNDE-209ENST00000560208 DNMT1P26358 1616 aaKnown RBP36.09■■■■□ 3.37
CRNDE-209ENST00000560208 DAPK1P53355 1430 aa36.08■■■■□ 3.37
CRNDE-209ENST00000560208 TNRQ92752 1358 aa36.08■■■■□ 3.37
CRNDE-209ENST00000560208 KIF15Q9NS87 1388 aa36.07■■■■□ 3.36
CRNDE-209ENST00000560208 NCKAP5LQ9HCH0 1330 aa36.07■■■■□ 3.36
CRNDE-209ENST00000560208 A2ML1A8K2U0 1454 aa36.06■■■■□ 3.36
CRNDE-209ENST00000560208 RRP7BPQ9NSQ0 103 aa36.05■■■■□ 3.36
CRNDE-209ENST00000560208 PLA2R1Q13018 1463 aa36.05■■■■□ 3.36
CRNDE-209ENST00000560208 ZC3H13Q5T200 1668 aaKnown RBP36.03■■■■□ 3.36
CRNDE-209ENST00000560208 ABCC3O15438 1527 aa36.03■■■■□ 3.36
CRNDE-209ENST00000560208 MROH1Q8NDA8 1641 aa36.03■■■■□ 3.36
CRNDE-209ENST00000560208 PKD2Q13563 968 aa36.01■■■■□ 3.36
CRNDE-209ENST00000560208 CHIC2Q9UKJ5 165 aa35.98■■■■□ 3.35
CRNDE-209ENST00000560208 ERBINQ96RT1 1412 aa35.98■■■■□ 3.35
CRNDE-209ENST00000560208 CEP152O94986 1710 aa35.97■■■■□ 3.35
CRNDE-209ENST00000560208 ANKRD30AQ9BXX3 1397 aa35.94■■■■□ 3.34
CRNDE-209ENST00000560208 CFAP65Q6ZU64 1925 aaKnown RBP35.93■■■■□ 3.34
CRNDE-209ENST00000560208 FAM50AQ14320 339 aaKnown RBP35.93■■■■□ 3.34
CRNDE-209ENST00000560208 NLRP1Q9C000 1473 aa35.92■■■■□ 3.34
CRNDE-209ENST00000560208 LTBP4Q8N2S1 1624 aa35.91■■■■□ 3.34
CRNDE-209ENST00000560208 PRDM15P57071 1507 aaPredicted RBP35.89■■■■□ 3.34
CRNDE-209ENST00000560208 SPATA31D1Q6ZQQ2 1576 aa35.89■■■■□ 3.34
CRNDE-209ENST00000560208 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.87■■■■□ 3.33
CRNDE-209ENST00000560208 ERVK-7P63135 1459 aa35.86■■■■□ 3.33
CRNDE-209ENST00000560208 THEMISQ8N1K5 641 aaPredicted RBP35.85■■■■□ 3.33
CRNDE-209ENST00000560208 DEPDC5O75140 1603 aa35.85■■■■□ 3.33
CRNDE-209ENST00000560208 POLR1AO95602 1720 aaPredicted RBP35.85■■■■□ 3.33
CRNDE-209ENST00000560208 UGGT1Q9NYU2 1555 aa35.85■■■■□ 3.33
CRNDE-209ENST00000560208 ADGRL2O95490 1459 aa35.82■■■■□ 3.32
CRNDE-209ENST00000560208 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.82■■■■□ 3.32
CRNDE-209ENST00000560208 ZNF335Q9H4Z2 1342 aaPredicted RBP35.82■■■■□ 3.32
CRNDE-209ENST00000560208 KANK1Q14678 1352 aa35.8■■■■□ 3.32
CRNDE-209ENST00000560208 ANKLE2Q86XL3 938 aa35.79■■■■□ 3.32
CRNDE-209ENST00000560208 ARHGAP31Q2M1Z3 1444 aa35.78■■■■□ 3.32
CRNDE-209ENST00000560208 NEURL4Q96JN8 1562 aa35.77■■■■□ 3.32
CRNDE-209ENST00000560208 IQSEC2Q5JU85 1478 aa35.73■■■■□ 3.31
CRNDE-209ENST00000560208 PPARGC1BQ86YN6 1023 aaKnown RBP35.71■■■■□ 3.31
CRNDE-209ENST00000560208 VWDEQ8N2E2 1590 aa35.7■■■■□ 3.31
CRNDE-209ENST00000560208 LMTK2Q8IWU2 1503 aa35.68■■■■□ 3.3
CRNDE-209ENST00000560208 ANKRD50Q9ULJ7 1429 aa35.67■■■■□ 3.3
CRNDE-209ENST00000560208 UBR1Q8IWV7 1749 aa35.67■■■■□ 3.3
CRNDE-209ENST00000560208 MED14O60244 1454 aa35.65■■■■□ 3.3
CRNDE-209ENST00000560208 NPHP4O75161 1426 aaPredicted RBP35.64■■■■□ 3.3
CRNDE-209ENST00000560208 IQGAP1P46940 1657 aa35.59■■■■□ 3.29
CRNDE-209ENST00000560208 EFCAB6Q5THR3 1501 aa35.57■■■■□ 3.29
CRNDE-209ENST00000560208 PIK3C2BO00750 1634 aa35.56■■■■□ 3.28
CRNDE-209ENST00000560208 ROCK1Q13464 1354 aa35.55■■■■□ 3.28
CRNDE-209ENST00000560208 ITGAEP38570 1179 aa35.53■■■■□ 3.28
CRNDE-209ENST00000560208 SLIT1O75093 1534 aa35.52■■■■□ 3.28
CRNDE-209ENST00000560208 CPS1P31327 1500 aa35.52■■■■□ 3.28
CRNDE-209ENST00000560208 IDI1Q13907 227 aa35.51■■■■□ 3.28
CRNDE-209ENST00000560208 STAG3Q9UJ98 1225 aa35.51■■■■□ 3.28
CRNDE-209ENST00000560208 SCAF11Q99590 1463 aaKnown RBP35.51■■■■□ 3.28
CRNDE-209ENST00000560208 ARHGAP23Q9P227 1491 aa35.51■■■■□ 3.28
CRNDE-209ENST00000560208 SYNMO15061 1565 aa35.51■■■■□ 3.27
CRNDE-209ENST00000560208 NOS1P29475 1434 aa35.5■■■■□ 3.27
CRNDE-209ENST00000560208 UBAP1LF5GYI3 381 aa35.5■■■■□ 3.27
CRNDE-209ENST00000560208 LTKP29376 864 aa35.49■■■■□ 3.27
CRNDE-209ENST00000560208 TXNDC2Q86VQ3 553 aa35.49■■■■□ 3.27
CRNDE-209ENST00000560208 UNC13BO14795 1591 aa35.47■■■■□ 3.27
CRNDE-209ENST00000560208 TET3O43151 1660 aa35.46■■■■□ 3.27
CRNDE-209ENST00000560208 KDM5AP29375 1690 aaKnown RBP35.46■■■■□ 3.27
CRNDE-209ENST00000560208 RPRD2Q5VT52 1461 aaKnown RBP35.46■■■■□ 3.27
CRNDE-209ENST00000560208 EID1Q9Y6B2 187 aa35.45■■■■□ 3.27
CRNDE-209ENST00000560208 TMEM2Q9UHN6 1383 aa35.43■■■■□ 3.26
CRNDE-209ENST00000560208 SLC52A1Q9NWF4 448 aa35.42■■■■□ 3.26
CRNDE-209ENST00000560208 GCC2Q8IWJ2 1684 aa35.42■■■■□ 3.26
CRNDE-209ENST00000560208 STRCP1A6NGW2 1772 aa35.38■■■■□ 3.25
CRNDE-209ENST00000560208 ADGRB3O60242 1522 aa35.36■■■■□ 3.25
CRNDE-209ENST00000560208 IQGAP3Q86VI3 1631 aa35.35■■■■□ 3.25
CRNDE-209ENST00000560208 RRBP1Q9P2E9 1410 aaKnown RBP35.34■■■■□ 3.25
CRNDE-209ENST00000560208 E9PCH4 1651 aa35.32■■■■□ 3.24
CRNDE-209ENST00000560208 NUP155O75694 1391 aa35.31■■■■□ 3.24
CRNDE-209ENST00000560208 TOM1O60784 492 aa35.3■■■■□ 3.24
CRNDE-209ENST00000560208 MYO5BQ9ULV0 1848 aa35.28■■■■□ 3.24
CRNDE-209ENST00000560208 LRRC7Q96NW7 1537 aa35.27■■■■□ 3.24
CRNDE-209ENST00000560208 PIP4K2BP78356 416 aa35.24■■■■□ 3.23
CRNDE-209ENST00000560208 SCAF1Q9H7N4 1312 aaKnown RBP35.24■■■■□ 3.23
CRNDE-209ENST00000560208 TMEM131LA2VDJ0 1609 aa35.21■■■■□ 3.23
CRNDE-209ENST00000560208 SLC26A8Q96RN1 970 aa35.18■■■■□ 3.22
CRNDE-209ENST00000560208 CHGAP10645 457 aaKnown RBP35.17■■■■□ 3.22
CRNDE-209ENST00000560208 ZFYVE9O95405 1425 aa35.16■■■■□ 3.22
CRNDE-209ENST00000560208 RIMS2Q9UQ26 1411 aa35.15■■■■□ 3.22
CRNDE-209ENST00000560208 ALKQ9UM73 1620 aa35.14■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms