RNA–Protein interactions for RNA: ENST00000559971.5

APH1B-207, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 1 (best)

Gene APH1B, Length 1,455 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-207ENST00000559971 MYT1Q01538 1121 aa22.32■■□□□ 1.16
APH1B-207ENST00000559971 IQGAP3Q86VI3 1631 aa22.31■■□□□ 1.16
APH1B-207ENST00000559971 RTEL1-TNFRSF6BF6WH68 1400 aa22.31■■□□□ 1.16
APH1B-207ENST00000559971 MRS2Q9HD23 443 aa22.3■■□□□ 1.16
APH1B-207ENST00000559971 MAGI2Q86UL8 1455 aa22.3■■□□□ 1.16
APH1B-207ENST00000559971 ZCCHC11Q5TAX3 1644 aaKnown RBP22.29■■□□□ 1.16
APH1B-207ENST00000559971 STAC3Q96MF2 364 aa22.28■■□□□ 1.16
APH1B-207ENST00000559971 ZNF326Q5BKZ1 582 aaKnown RBP22.28■■□□□ 1.16
APH1B-207ENST00000559971 ZBED9Q6R2W3 1325 aa22.28■■□□□ 1.16
APH1B-207ENST00000559971 ERCC6L2Q5T890 1561 aa22.26■■□□□ 1.15
APH1B-207ENST00000559971 DHX29Q7Z478 1369 aaKnown RBP22.26■■□□□ 1.15
APH1B-207ENST00000559971 DCAF11Q8TEB1 546 aa22.26■■□□□ 1.15
APH1B-207ENST00000559971 ABCC1P33527 1531 aa22.25■■□□□ 1.15
APH1B-207ENST00000559971 LAMC1P11047 1609 aa22.25■■□□□ 1.15
APH1B-207ENST00000559971 GPRASP1Q5JY77 1395 aa22.24■■□□□ 1.15
APH1B-207ENST00000559971 PRAG1Q86YV5 1406 aa22.24■■□□□ 1.15
APH1B-207ENST00000559971 EIF2AK4Q9P2K8 1649 aaKnown RBP22.23■■□□□ 1.15
APH1B-207ENST00000559971 BCORL1Q5H9F3 1711 aa22.21■■□□□ 1.15
APH1B-207ENST00000559971 RALBP1Q15311 655 aa22.2■■□□□ 1.14
APH1B-207ENST00000559971 KDM2AQ9Y2K7 1162 aa22.18■■□□□ 1.14
APH1B-207ENST00000559971 PLA2R1Q13018 1463 aa22.17■■□□□ 1.14
APH1B-207ENST00000559971 TRPM1Q7Z4N2 1603 aa22.16■■□□□ 1.14
APH1B-207ENST00000559971 FAM9BQ8IZU0 186 aa22.16■■□□□ 1.14
APH1B-207ENST00000559971 WDR7Q9Y4E6 1490 aa22.16■■□□□ 1.14
APH1B-207ENST00000559971 SPAG9O60271 1321 aaKnown RBP22.16■■□□□ 1.14
APH1B-207ENST00000559971 WASHC2CQ9Y4E1 1318 aa22.16■■□□□ 1.14
APH1B-207ENST00000559971 ST20-MTHFSA0A0A6YYL1 179 aa22.15■■□□□ 1.14
APH1B-207ENST00000559971 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.14■■□□□ 1.13
APH1B-207ENST00000559971 TSHZ2Q9NRE2 1034 aa22.14■■□□□ 1.13
APH1B-207ENST00000559971 BRD4O60885 1362 aaPredicted RBP22.13■■□□□ 1.13
APH1B-207ENST00000559971 A2MP01023 1474 aa22.12■■□□□ 1.13
APH1B-207ENST00000559971 CCDC184Q52MB2 194 aa22.12■■□□□ 1.13
APH1B-207ENST00000559971 KANK1Q14678 1352 aa22.11■■□□□ 1.13
APH1B-207ENST00000559971 TRAPPC8Q9Y2L5 1435 aa22.1■■□□□ 1.13
APH1B-207ENST00000559971 BCANQ96GW7 911 aa22.09■■□□□ 1.13
APH1B-207ENST00000559971 POLR3GLQ9BT43 218 aa22.09■■□□□ 1.13
APH1B-207ENST00000559971 MYBBP1AQ9BQG0 1328 aaKnown RBP22.09■■□□□ 1.13
APH1B-207ENST00000559971 PRDM15P57071 1507 aaPredicted RBP22.09■■□□□ 1.13
APH1B-207ENST00000559971 TMC1Q8TDI8 760 aa22.08■■□□□ 1.12
APH1B-207ENST00000559971 ZFYVE16Q7Z3T8 1539 aa22.07■■□□□ 1.12
APH1B-207ENST00000559971 ABCA9Q8IUA7 1624 aa22.07■■□□□ 1.12
APH1B-207ENST00000559971 SLC24A1O60721 1099 aa22.07■■□□□ 1.12
APH1B-207ENST00000559971 SMG6Q86US8 1419 aaKnown RBP22.07■■□□□ 1.12
APH1B-207ENST00000559971 NEURL4Q96JN8 1562 aa22.06■■□□□ 1.12
APH1B-207ENST00000559971 E9PCH4 1651 aa22.06■■□□□ 1.12
APH1B-207ENST00000559971 PTPRTO14522 1441 aa22.06■■□□□ 1.12
APH1B-207ENST00000559971 PPP4R2Q9NY27 417 aa22.05■■□□□ 1.12
APH1B-207ENST00000559971 DEPDC5O75140 1603 aa22.04■■□□□ 1.12
APH1B-207ENST00000559971 TRPM2O94759 1503 aa22.04■■□□□ 1.12
APH1B-207ENST00000559971 INSRP06213 1382 aa22.04■■□□□ 1.12
APH1B-207ENST00000559971 FANCAO15360 1455 aa22.03■■□□□ 1.12
APH1B-207ENST00000559971 COL17A1Q9UMD9 1497 aaPredicted RBP22.03■■□□□ 1.12
APH1B-207ENST00000559971 RGL3Q3MIN7 710 aa22.03■■□□□ 1.12
APH1B-207ENST00000559971 TMF1P82094 1093 aa22.03■■□□□ 1.12
APH1B-207ENST00000559971 PNISRQ8TF01 805 aaKnown RBP22.03■■□□□ 1.12
APH1B-207ENST00000559971 ATP7AQ04656 1500 aa22.01■■□□□ 1.11
APH1B-207ENST00000559971 CDCA8Q53HL2 280 aa22.01■■□□□ 1.11
APH1B-207ENST00000559971 INO80Q9ULG1 1556 aaPredicted RBP22.01■■□□□ 1.11
APH1B-207ENST00000559971 TET3O43151 1660 aa22■■□□□ 1.11
APH1B-207ENST00000559971 LRPPRCP42704 1394 aaKnown RBP21.99■■□□□ 1.11
APH1B-207ENST00000559971 NLRP13Q86W25 1043 aa21.99■■□□□ 1.11
APH1B-207ENST00000559971 SCAPERQ9BY12 1400 aa21.99■■□□□ 1.11
APH1B-207ENST00000559971 RNF17Q9BXT8 1623 aaKnown RBP21.99■■□□□ 1.11
APH1B-207ENST00000559971 VWDEQ8N2E2 1590 aa21.99■■□□□ 1.11
APH1B-207ENST00000559971 ZMYM4Q5VZL5 1548 aa21.98■■□□□ 1.11
APH1B-207ENST00000559971 NUDCQ9Y266 331 aa21.98■■□□□ 1.11
APH1B-207ENST00000559971 PARD3Q8TEW0 1356 aa21.97■■□□□ 1.11
APH1B-207ENST00000559971 DNAJC5Q9H3Z4 198 aa21.96■■□□□ 1.11
APH1B-207ENST00000559971 ADGRL1O94910 1474 aa21.96■■□□□ 1.11
APH1B-207ENST00000559971 AFAP1Q8N556 730 aa21.96■■□□□ 1.11
APH1B-207ENST00000559971 TESK2Q96S53 571 aa21.96■■□□□ 1.11
APH1B-207ENST00000559971 NPM1P06748 294 aaKnown RBP eCLIP21.95■■□□□ 1.1
APH1B-207ENST00000559971 NBPF1Q3BBV0 1214 aa21.95■■□□□ 1.1
APH1B-207ENST00000559971 SPHKAPQ2M3C7 1700 aa21.94■■□□□ 1.1
APH1B-207ENST00000559971 ASXL2Q76L83 1435 aa21.93■■□□□ 1.1
APH1B-207ENST00000559971 CEP152O94986 1710 aa21.93■■□□□ 1.1
APH1B-207ENST00000559971 CFAP74Q9C0B2 1584 aa21.93■■□□□ 1.1
APH1B-207ENST00000559971 EIF3AQ14152 1382 aaKnown RBP21.92■■□□□ 1.1
APH1B-207ENST00000559971 PDE3BQ13370 1112 aa21.92■■□□□ 1.1
APH1B-207ENST00000559971 RIMBP3CA6NJZ7 1639 aa21.92■■□□□ 1.1
APH1B-207ENST00000559971 RIMBP3BA6NNM3 1639 aa21.92■■□□□ 1.1
APH1B-207ENST00000559971 RIMBP3Q9UFD9 1639 aa21.92■■□□□ 1.1
APH1B-207ENST00000559971 RNF123Q5XPI4 1314 aa21.91■■□□□ 1.1
APH1B-207ENST00000559971 PER1O15534 1290 aaPredicted RBP21.9■■□□□ 1.1
APH1B-207ENST00000559971 MADDQ8WXG6 1647 aa21.9■■□□□ 1.1
APH1B-207ENST00000559971 KIAA1210Q9ULL0 1709 aa21.9■■□□□ 1.1
APH1B-207ENST00000559971 ZNF518AQ6AHZ1 1483 aa21.89■■□□□ 1.1
APH1B-207ENST00000559971 SCAF11Q99590 1463 aaKnown RBP21.89■■□□□ 1.1
APH1B-207ENST00000559971 LMTK2Q8IWU2 1503 aa21.88■■□□□ 1.09
APH1B-207ENST00000559971 MYOM2P54296 1465 aa21.86■■□□□ 1.09
APH1B-207ENST00000559971 KIF3BO15066 747 aa21.85■■□□□ 1.09
APH1B-207ENST00000559971 IQGAP1P46940 1657 aa21.85■■□□□ 1.09
APH1B-207ENST00000559971 MYT1LQ9UL68 1186 aa21.84■■□□□ 1.09
APH1B-207ENST00000559971 DISP3Q9P2K9 1392 aa21.84■■□□□ 1.09
APH1B-207ENST00000559971 CLTCL1P53675 1640 aa21.84■■□□□ 1.09
APH1B-207ENST00000559971 NPC1L1Q9UHC9 1359 aa21.81■■□□□ 1.08
APH1B-207ENST00000559971 PANK3Q9H999 370 aa21.81■■□□□ 1.08
APH1B-207ENST00000559971 RBM19Q9Y4C8 960 aaKnown RBP21.81■■□□□ 1.08
APH1B-207ENST00000559971 EFCAB6Q5THR3 1501 aa21.8■■□□□ 1.08
APH1B-207ENST00000559971 MLH3Q9UHC1 1453 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms