RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 POTEGQ6S5H5 508 aa8.31□□□□□ -1.08
SPG11-220ENST00000559933 MICALL2Q8IY33 904 aa8.31□□□□□ -1.08
SPG11-220ENST00000559933 HS6ST3Q8IZP7 471 aa8.31□□□□□ -1.08
SPG11-220ENST00000559933 TMEM121BQ9BXQ6 578 aaPredicted RBP8.31□□□□□ -1.08
SPG11-220ENST00000559933 MFRPQ9BY79 579 aa8.31□□□□□ -1.08
SPG11-220ENST00000559933 FBXO22Q8NEZ5 403 aa8.3□□□□□ -1.08
SPG11-220ENST00000559933 VPS8Q8N3P4 1428 aa8.29□□□□□ -1.08
SPG11-220ENST00000559933 ARHGEF11O15085 1522 aa8.29□□□□□ -1.08
SPG11-220ENST00000559933 LRRIQ1Q96JM4 1722 aa8.29□□□□□ -1.08
SPG11-220ENST00000559933 RIMBP3CA6NJZ7 1639 aa8.29□□□□□ -1.08
SPG11-220ENST00000559933 RIMBP3BA6NNM3 1639 aa8.29□□□□□ -1.08
SPG11-220ENST00000559933 RIMBP3Q9UFD9 1639 aa8.29□□□□□ -1.08
SPG11-220ENST00000559933 PLB1Q6P1J6 1458 aa8.28□□□□□ -1.08
SPG11-220ENST00000559933 ARID3CA6NKF2 412 aa8.28□□□□□ -1.08
SPG11-220ENST00000559933 CARMIL2Q6F5E8 1435 aa8.28□□□□□ -1.08
SPG11-220ENST00000559933 ST18O60284 1047 aa8.27□□□□□ -1.09
SPG11-220ENST00000559933 RAPGEF6Q8TEU7 1601 aa8.26□□□□□ -1.09
SPG11-220ENST00000559933 PPARGC1BQ86YN6 1023 aaKnown RBP8.26□□□□□ -1.09
SPG11-220ENST00000559933 CDK13Q14004 1512 aaKnown RBP8.25□□□□□ -1.09
SPG11-220ENST00000559933 RYDENQ9NUL5 291 aaKnown RBP8.25□□□□□ -1.09
SPG11-220ENST00000559933 ATP1B4Q9UN42 357 aaPredicted RBP8.25□□□□□ -1.09
SPG11-220ENST00000559933 ABCA8O94911 1581 aa8.25□□□□□ -1.09
SPG11-220ENST00000559933 PTPRGP23470 1445 aa8.24□□□□□ -1.09
SPG11-220ENST00000559933 FMN1Q68DA7 1419 aa8.24□□□□□ -1.09
SPG11-220ENST00000559933 ZNF710Q8N1W2 664 aa8.24□□□□□ -1.09
SPG11-220ENST00000559933 ADCY10Q96PN6 1610 aa8.24□□□□□ -1.09
SPG11-220ENST00000559933 NUP153P49790 1475 aaKnown RBP8.24□□□□□ -1.09
SPG11-220ENST00000559933 FYCO1Q9BQS8 1478 aa8.24□□□□□ -1.09
SPG11-220ENST00000559933 CASKIN1Q8WXD9 1431 aa8.23□□□□□ -1.09
SPG11-220ENST00000559933 HECW1Q76N89 1606 aa8.23□□□□□ -1.09
SPG11-220ENST00000559933 DOK7Q18PE1 504 aa8.23□□□□□ -1.09
SPG11-220ENST00000559933 LCE2DQ5TA82 110 aaPredicted RBP8.23□□□□□ -1.09
SPG11-220ENST00000559933 CFAP43Q8NDM7 1665 aa8.23□□□□□ -1.09
SPG11-220ENST00000559933 RIMBP2O15034 1052 aa8.22□□□□□ -1.09
SPG11-220ENST00000559933 PCDH10Q9P2E7 1040 aa8.22□□□□□ -1.09
SPG11-220ENST00000559933 MAGI3Q5TCQ9 1506 aa8.21□□□□□ -1.1
SPG11-220ENST00000559933 AMER1Q5JTC6 1135 aaPredicted RBP8.21□□□□□ -1.1
SPG11-220ENST00000559933 TIAM1Q13009 1591 aa8.21□□□□□ -1.1
SPG11-220ENST00000559933 UACAQ9BZF9 1416 aa8.2□□□□□ -1.1
SPG11-220ENST00000559933 ABCC2Q92887 1545 aa8.2□□□□□ -1.1
SPG11-220ENST00000559933 EPRSP07814 1512 aaKnown RBP8.19□□□□□ -1.1
SPG11-220ENST00000559933 ZCCHC11Q5TAX3 1644 aaKnown RBP8.19□□□□□ -1.1
SPG11-220ENST00000559933 TMC2Q8TDI7 906 aa8.19□□□□□ -1.1
SPG11-220ENST00000559933 EMP3P54852 163 aa8.18□□□□□ -1.1
SPG11-220ENST00000559933 KANK4Q5T7N3 995 aaPredicted RBP8.18□□□□□ -1.1
SPG11-220ENST00000559933 CYB5RLQ6IPT4 315 aa8.18□□□□□ -1.1
SPG11-220ENST00000559933 MARVELD3Q96A59 401 aa8.18□□□□□ -1.1
SPG11-220ENST00000559933 TMEM92Q6UXU6 159 aa8.17□□□□□ -1.1
SPG11-220ENST00000559933 ATP10BO94823 1461 aa8.17□□□□□ -1.1
SPG11-220ENST00000559933 UHRF1BP1LA0JNW5 1464 aa8.16□□□□□ -1.1
SPG11-220ENST00000559933 PPP1R37O75864 691 aa8.16□□□□□ -1.1
SPG11-220ENST00000559933 CCDC18Q5T9S5 1454 aa8.16□□□□□ -1.1
SPG11-220ENST00000559933 LRRC9Q6ZRR7 1453 aa8.15□□□□□ -1.1
SPG11-220ENST00000559933 HOXB3P14651 431 aaPredicted RBP8.15□□□□□ -1.1
SPG11-220ENST00000559933 KIF14Q15058 1648 aa8.14□□□□□ -1.11
SPG11-220ENST00000559933 C2orf72A6NCS6 295 aa8.14□□□□□ -1.11
SPG11-220ENST00000559933 CDAN1Q8IWY9 1227 aa8.14□□□□□ -1.11
SPG11-220ENST00000559933 PLSCR2Q9NRY7 297 aa8.14□□□□□ -1.11
SPG11-220ENST00000559933 KDM5BQ9UGL1 1544 aa8.13□□□□□ -1.11
SPG11-220ENST00000559933 NKX1-1Q15270 411 aaPredicted RBP8.13□□□□□ -1.11
SPG11-220ENST00000559933 ZSWIM6Q9HCJ5 1215 aa8.13□□□□□ -1.11
SPG11-220ENST00000559933 MAP3K1Q13233 1512 aa8.13□□□□□ -1.11
SPG11-220ENST00000559933 EHBP1L1Q8N3D4 1523 aa8.13□□□□□ -1.11
SPG11-220ENST00000559933 HOXB1P14653 301 aaPredicted RBP8.12□□□□□ -1.11
SPG11-220ENST00000559933 MTUS2Q5JR59 1369 aa8.11□□□□□ -1.11
SPG11-220ENST00000559933 TTC37Q6PGP7 1564 aa8.11□□□□□ -1.11
SPG11-220ENST00000559933 ASXL2Q76L83 1435 aa8.11□□□□□ -1.11
SPG11-220ENST00000559933 SUPT6HQ7KZ85 1726 aaKnown RBP8.1□□□□□ -1.11
SPG11-220ENST00000559933 FAM205CA6NFA0 338 aa8.1□□□□□ -1.11
SPG11-220ENST00000559933 TROQ12816 1431 aaPredicted RBP8.1□□□□□ -1.11
SPG11-220ENST00000559933 PHLDB1Q86UU1 1377 aa8.1□□□□□ -1.11
SPG11-220ENST00000559933 ERBB3P21860 1342 aa8.09□□□□□ -1.11
SPG11-220ENST00000559933 NCOA2Q15596 1464 aa8.09□□□□□ -1.11
SPG11-220ENST00000559933 RTN4Q9NQC3 1192 aaKnown RBP8.09□□□□□ -1.11
SPG11-220ENST00000559933 WDR7Q9Y4E6 1490 aa8.08□□□□□ -1.12
SPG11-220ENST00000559933 KIF3CO14782 793 aa8.08□□□□□ -1.12
SPG11-220ENST00000559933 KCNH8Q96L42 1107 aa8.08□□□□□ -1.12
SPG11-220ENST00000559933 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.08□□□□□ -1.12
SPG11-220ENST00000559933 HS3ST6Q96QI5 342 aa8.07□□□□□ -1.12
SPG11-220ENST00000559933 MAPKBP1O60336 1514 aa8.07□□□□□ -1.12
SPG11-220ENST00000559933 ABCC10Q5T3U5 1492 aa8.06□□□□□ -1.12
SPG11-220ENST00000559933 GPHNQ9NQX3 736 aaPredicted RBP8.06□□□□□ -1.12
SPG11-220ENST00000559933 CDC42BPAQ5VT25 1732 aa8.06□□□□□ -1.12
SPG11-220ENST00000559933 PLEKHD1A6NEE1 506 aa8.05□□□□□ -1.12
SPG11-220ENST00000559933 GTPBP6O43824 516 aaPredicted RBP8.05□□□□□ -1.12
SPG11-220ENST00000559933 ARSIQ5FYB1 569 aa8.05□□□□□ -1.12
SPG11-220ENST00000559933 DIP2BQ9P265 1576 aa8.05□□□□□ -1.12
SPG11-220ENST00000559933 GPR153Q6NV75 609 aa8.04□□□□□ -1.12
SPG11-220ENST00000559933 BBXQ8WY36 941 aaPredicted RBP8.04□□□□□ -1.12
SPG11-220ENST00000559933 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.04□□□□□ -1.12
SPG11-220ENST00000559933 PREX2Q70Z35 1606 aa8.03□□□□□ -1.12
SPG11-220ENST00000559933 CCNB3Q8WWL7 1395 aa8.03□□□□□ -1.12
SPG11-220ENST00000559933 FOXK1P85037 733 aa8.03□□□□□ -1.12
SPG11-220ENST00000559933 CDK11AQ9UQ88 783 aaPredicted RBP8.03□□□□□ -1.12
SPG11-220ENST00000559933 MYO5CQ9NQX4 1742 aa8.03□□□□□ -1.12
SPG11-220ENST00000559933 CDC42BPBQ9Y5S2 1711 aa8.03□□□□□ -1.12
SPG11-220ENST00000559933 ABCA9Q8IUA7 1624 aa8.03□□□□□ -1.12
SPG11-220ENST00000559933 GPATCH8Q9UKJ3 1502 aaKnown RBP8.03□□□□□ -1.12
SPG11-220ENST00000559933 MYOM3Q5VTT5 1437 aa8.03□□□□□ -1.12
SPG11-220ENST00000559933 FGD6Q6ZV73 1430 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms