RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 TXNDC2Q86VQ3 553 aa14.05□□□□□ -0.16
CARMIL3-202ENST00000559694 MINK1Q8N4C8 1332 aaPredicted RBP14.05□□□□□ -0.16
CARMIL3-202ENST00000559694 TMEM132EQ6IEE7 984 aa14.04□□□□□ -0.16
CARMIL3-202ENST00000559694 SUPT6HQ7KZ85 1726 aaKnown RBP14.04□□□□□ -0.16
CARMIL3-202ENST00000559694 TERF2IPQ9NYB0 399 aa14.04□□□□□ -0.16
CARMIL3-202ENST00000559694 MAPK8IP3Q9UPT6 1336 aa14.03□□□□□ -0.16
CARMIL3-202ENST00000559694 WDR97A6NE52 1622 aa14.02□□□□□ -0.16
CARMIL3-202ENST00000559694 NUP153P49790 1475 aaKnown RBP14.02□□□□□ -0.16
CARMIL3-202ENST00000559694 FANCAO15360 1455 aa14.02□□□□□ -0.17
CARMIL3-202ENST00000559694 RBM19Q9Y4C8 960 aaKnown RBP14.02□□□□□ -0.17
CARMIL3-202ENST00000559694 UGGT2Q9NYU1 1516 aa14.02□□□□□ -0.17
CARMIL3-202ENST00000559694 CCDC141Q6ZP82 1450 aa14.01□□□□□ -0.17
CARMIL3-202ENST00000559694 SLC52A1Q9NWF4 448 aa14.01□□□□□ -0.17
CARMIL3-202ENST00000559694 CFAP70Q5T0N1 1121 aa14.01□□□□□ -0.17
CARMIL3-202ENST00000559694 THEMISQ8N1K5 641 aaPredicted RBP14.01□□□□□ -0.17
CARMIL3-202ENST00000559694 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14□□□□□ -0.17
CARMIL3-202ENST00000559694 TARBP1Q13395 1621 aaKnown RBP14□□□□□ -0.17
CARMIL3-202ENST00000559694 POGZQ7Z3K3 1410 aa14□□□□□ -0.17
CARMIL3-202ENST00000559694 PBRM1Q86U86 1689 aa14□□□□□ -0.17
CARMIL3-202ENST00000559694 LAS1LQ9Y4W2 734 aaKnown RBP14□□□□□ -0.17
CARMIL3-202ENST00000559694 HFM1A2PYH4 1435 aa14□□□□□ -0.17
CARMIL3-202ENST00000559694 KIF14Q15058 1648 aa13.99□□□□□ -0.17
CARMIL3-202ENST00000559694 DENND4BO75064 1496 aaPredicted RBP13.99□□□□□ -0.17
CARMIL3-202ENST00000559694 CCDC136Q96JN2 1154 aa13.99□□□□□ -0.17
CARMIL3-202ENST00000559694 ABCC5O15440 1437 aa13.99□□□□□ -0.17
CARMIL3-202ENST00000559694 CEBPAP49715 358 aaPredicted RBP13.99□□□□□ -0.17
CARMIL3-202ENST00000559694 STAC3Q96MF2 364 aa13.99□□□□□ -0.17
CARMIL3-202ENST00000559694 CAMSAP2Q08AD1 1489 aa13.98□□□□□ -0.17
CARMIL3-202ENST00000559694 AKNAQ7Z591 1439 aa13.98□□□□□ -0.17
CARMIL3-202ENST00000559694 ARXQ96QS3 562 aa13.97□□□□□ -0.17
CARMIL3-202ENST00000559694 GPATCH8Q9UKJ3 1502 aaKnown RBP13.97□□□□□ -0.17
CARMIL3-202ENST00000559694 SAMD9Q5K651 1589 aa13.96□□□□□ -0.17
CARMIL3-202ENST00000559694 EVC2Q86UK5 1308 aa13.96□□□□□ -0.17
CARMIL3-202ENST00000559694 CSB-PGBD3P0DP91 1061 aa13.96□□□□□ -0.17
CARMIL3-202ENST00000559694 RAPGEF6Q8TEU7 1601 aa13.96□□□□□ -0.17
CARMIL3-202ENST00000559694 NAIPQ13075 1403 aa13.96□□□□□ -0.17
CARMIL3-202ENST00000559694 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.96□□□□□ -0.17
CARMIL3-202ENST00000559694 SLC26A8Q96RN1 970 aa13.96□□□□□ -0.17
CARMIL3-202ENST00000559694 USP47Q96K76 1375 aa13.95□□□□□ -0.18
CARMIL3-202ENST00000559694 KIAA0556O60303 1618 aa13.95□□□□□ -0.18
CARMIL3-202ENST00000559694 DISP1Q96F81 1524 aa13.95□□□□□ -0.18
CARMIL3-202ENST00000559694 FBXO31Q5XUX0 539 aaPredicted RBP13.95□□□□□ -0.18
CARMIL3-202ENST00000559694 KTN1Q86UP2 1357 aaKnown RBP13.95□□□□□ -0.18
CARMIL3-202ENST00000559694 PLCH2O75038 1416 aa13.95□□□□□ -0.18
CARMIL3-202ENST00000559694 PANK3Q9H999 370 aa13.94□□□□□ -0.18
CARMIL3-202ENST00000559694 WDR7Q9Y4E6 1490 aa13.94□□□□□ -0.18
CARMIL3-202ENST00000559694 ROCK1Q13464 1354 aa13.94□□□□□ -0.18
CARMIL3-202ENST00000559694 KIAA1107Q9UPP5 1409 aa13.93□□□□□ -0.18
CARMIL3-202ENST00000559694 CENPJQ9HC77 1338 aaPredicted RBP13.93□□□□□ -0.18
CARMIL3-202ENST00000559694 NCOA1Q15788 1441 aa13.93□□□□□ -0.18
CARMIL3-202ENST00000559694 U2AF1L5P0DN76 240 aaPredicted RBP13.93□□□□□ -0.18
CARMIL3-202ENST00000559694 U2AF1Q01081 240 aaKnown RBP eCLIP13.93□□□□□ -0.18
CARMIL3-202ENST00000559694 NBPF1Q3BBV0 1214 aa13.93□□□□□ -0.18
CARMIL3-202ENST00000559694 ANKLE2Q86XL3 938 aa13.92□□□□□ -0.18
CARMIL3-202ENST00000559694 ABCC2Q92887 1545 aa13.91□□□□□ -0.18
CARMIL3-202ENST00000559694 CEP170Q5SW79 1584 aa13.91□□□□□ -0.18
CARMIL3-202ENST00000559694 PROSER2Q86WR7 435 aaPredicted RBP13.91□□□□□ -0.18
CARMIL3-202ENST00000559694 PNNQ9H307 717 aaKnown RBP13.91□□□□□ -0.18
CARMIL3-202ENST00000559694 LTV1Q96GA3 475 aaPredicted RBP13.9□□□□□ -0.18
CARMIL3-202ENST00000559694 CCDC9Q9Y3X0 531 aaKnown RBP13.9□□□□□ -0.18
CARMIL3-202ENST00000559694 ATF3P18847 181 aa13.9□□□□□ -0.18
CARMIL3-202ENST00000559694 AMPHP49418 695 aa13.9□□□□□ -0.18
CARMIL3-202ENST00000559694 PTPN23Q9H3S7 1636 aa13.89□□□□□ -0.19
CARMIL3-202ENST00000559694 RALBP1Q15311 655 aa13.89□□□□□ -0.19
CARMIL3-202ENST00000559694 IDI1Q13907 227 aa13.89□□□□□ -0.19
CARMIL3-202ENST00000559694 PSME1Q06323 249 aa13.88□□□□□ -0.19
CARMIL3-202ENST00000559694 DHX29Q7Z478 1369 aaKnown RBP13.88□□□□□ -0.19
CARMIL3-202ENST00000559694 NBPF8Q3BBV2 869 aa13.87□□□□□ -0.19
CARMIL3-202ENST00000559694 CABP2Q9NPB3 220 aa13.87□□□□□ -0.19
CARMIL3-202ENST00000559694 DEKP35659 375 aaKnown RBP13.86□□□□□ -0.19
CARMIL3-202ENST00000559694 PRAM1Q96QH2 718 aa13.86□□□□□ -0.19
CARMIL3-202ENST00000559694 TEX14Q8IWB6 1497 aa13.86□□□□□ -0.19
CARMIL3-202ENST00000559694 COG3Q96JB2 828 aa13.85□□□□□ -0.19
CARMIL3-202ENST00000559694 TRAPPC8Q9Y2L5 1435 aa13.85□□□□□ -0.19
CARMIL3-202ENST00000559694 RTF1Q92541 710 aaKnown RBP13.84□□□□□ -0.19
CARMIL3-202ENST00000559694 CCER2I3L3R5 266 aa13.83□□□□□ -0.19
CARMIL3-202ENST00000559694 RTN4Q9NQC3 1192 aaKnown RBP13.83□□□□□ -0.19
CARMIL3-202ENST00000559694 PPP4R2Q9NY27 417 aa13.83□□□□□ -0.19
CARMIL3-202ENST00000559694 ERBINQ96RT1 1412 aa13.83□□□□□ -0.2
CARMIL3-202ENST00000559694 CGNL1Q0VF96 1302 aa13.83□□□□□ -0.2
CARMIL3-202ENST00000559694 NLRP13Q86W25 1043 aa13.83□□□□□ -0.2
CARMIL3-202ENST00000559694 NOP58Q9Y2X3 529 aaKnown RBP13.83□□□□□ -0.2
CARMIL3-202ENST00000559694 PPP6R1Q9UPN7 881 aa13.81□□□□□ -0.2
CARMIL3-202ENST00000559694 RPGRIP1LQ68CZ1 1315 aa13.81□□□□□ -0.2
CARMIL3-202ENST00000559694 FRAT1Q92837 279 aaPredicted RBP13.81□□□□□ -0.2
CARMIL3-202ENST00000559694 B4GALNT3Q6L9W6 998 aa13.81□□□□□ -0.2
CARMIL3-202ENST00000559694 NUTM2GQ5VZR2 741 aa13.8□□□□□ -0.2
CARMIL3-202ENST00000559694 PMFBP1Q8TBY8 1022 aa13.8□□□□□ -0.2
CARMIL3-202ENST00000559694 ESCO1Q5FWF5 840 aa13.8□□□□□ -0.2
CARMIL3-202ENST00000559694 ANKRD30BQ9BXX2 1392 aa13.79□□□□□ -0.2
CARMIL3-202ENST00000559694 PTPRKQ15262 1439 aa13.79□□□□□ -0.2
CARMIL3-202ENST00000559694 TCOF1Q13428 1488 aaKnown RBP13.79□□□□□ -0.2
CARMIL3-202ENST00000559694 ZNF518AQ6AHZ1 1483 aa13.78□□□□□ -0.2
CARMIL3-202ENST00000559694 SYCP2Q9BX26 1530 aa13.78□□□□□ -0.2
CARMIL3-202ENST00000559694 KIF7Q2M1P5 1343 aa13.78□□□□□ -0.2
CARMIL3-202ENST00000559694 CCDC146Q8IYE0 955 aa13.77□□□□□ -0.2
CARMIL3-202ENST00000559694 GGNBP2Q9H3C7 697 aa13.77□□□□□ -0.2
CARMIL3-202ENST00000559694 MYH16Q9H6N6 1097 aa13.77□□□□□ -0.21
CARMIL3-202ENST00000559694 EVA1CP58658 441 aa13.77□□□□□ -0.21
CARMIL3-202ENST00000559694 FTSJ3Q8IY81 847 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms