RNA–Protein interactions for RNA: ENST00000559485.2

RGPD1-204, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-204ENST00000559485 ZNF622Q969S3 477 aaKnown RBP eCLIP3.02□□□□□ -1.93
RGPD1-204ENST00000559485 CLSTN1O94985 981 aa3.02□□□□□ -1.93
RGPD1-204ENST00000559485 MRE11P49959 708 aa3.02□□□□□ -1.93
RGPD1-204ENST00000559485 IRX3P78415 501 aaPredicted RBP3.02□□□□□ -1.93
RGPD1-204ENST00000559485 NGEFQ8N5V2 710 aa3.02□□□□□ -1.93
RGPD1-204ENST00000559485 CWC15Q9P013 229 aaKnown RBP3.02□□□□□ -1.93
RGPD1-204ENST00000559485 PCF11O94913 1555 aaKnown RBP3.01□□□□□ -1.93
RGPD1-204ENST00000559485 BRD4O60885 1362 aaPredicted RBP3.01□□□□□ -1.93
RGPD1-204ENST00000559485 CARMIL1Q5VZK9 1371 aa3.01□□□□□ -1.93
RGPD1-204ENST00000559485 CADPSQ9ULU8 1353 aa3.01□□□□□ -1.93
RGPD1-204ENST00000559485 TULP1O00294 542 aaPredicted RBP3.01□□□□□ -1.93
RGPD1-204ENST00000559485 TPM3P06753 285 aa3.01□□□□□ -1.93
RGPD1-204ENST00000559485 CTR9Q6PD62 1173 aa3.01□□□□□ -1.93
RGPD1-204ENST00000559485 C14orf37Q86TY3 774 aa3.01□□□□□ -1.93
RGPD1-204ENST00000559485 GBP4Q96PP9 640 aa3.01□□□□□ -1.93
RGPD1-204ENST00000559485 CCDC7Q96M83 1385 aa3.01□□□□□ -1.93
RGPD1-204ENST00000559485 PDCL2Q8N4E4 241 aa3.01□□□□□ -1.93
RGPD1-204ENST00000559485 CTTNBP2Q8WZ74 1663 aa3.01□□□□□ -1.93
RGPD1-204ENST00000559485 TCOF1Q13428 1488 aaKnown RBP3.01□□□□□ -1.93
RGPD1-204ENST00000559485 ROCK1Q13464 1354 aa3.01□□□□□ -1.93
RGPD1-204ENST00000559485 ANKRD30AQ9BXX3 1397 aa3.01□□□□□ -1.93
RGPD1-204ENST00000559485 NCOA1Q15788 1441 aa3.01□□□□□ -1.93
RGPD1-204ENST00000559485 CCDC173Q0VFZ6 552 aa3.01□□□□□ -1.93
RGPD1-204ENST00000559485 CREBRFQ8IUR6 639 aa3.01□□□□□ -1.93
RGPD1-204ENST00000559485 ZMYM3Q14202 1370 aa3□□□□□ -1.93
RGPD1-204ENST00000559485 FTSJ3Q8IY81 847 aaKnown RBP3□□□□□ -1.93
RGPD1-204ENST00000559485 KDM2AQ9Y2K7 1162 aa3□□□□□ -1.93
RGPD1-204ENST00000559485 KIF20AO95235 890 aa3□□□□□ -1.93
RGPD1-204ENST00000559485 TMC1Q8TDI8 760 aa3□□□□□ -1.93
RGPD1-204ENST00000559485 CCDC9Q9Y3X0 531 aaKnown RBP3□□□□□ -1.93
RGPD1-204ENST00000559485 CFTRP13569 1480 aa3□□□□□ -1.93
RGPD1-204ENST00000559485 HSPA5P11021 654 aaKnown RBP3□□□□□ -1.93
RGPD1-204ENST00000559485 MCM5P33992 734 aa3□□□□□ -1.93
RGPD1-204ENST00000559485 CLCN1P35523 988 aa3□□□□□ -1.93
RGPD1-204ENST00000559485 HMGN5P82970 282 aaKnown RBP3□□□□□ -1.93
RGPD1-204ENST00000559485 KANK4Q5T7N3 995 aaPredicted RBP3□□□□□ -1.93
RGPD1-204ENST00000559485 CENPQQ7L2Z9 268 aaPredicted RBP3□□□□□ -1.93
RGPD1-204ENST00000559485 MNS1Q8NEH6 495 aa3□□□□□ -1.93
RGPD1-204ENST00000559485 TMEM132AQ24JP5 1023 aa3□□□□□ -1.93
RGPD1-204ENST00000559485 TPRNQ4KMQ1 711 aa3□□□□□ -1.93
RGPD1-204ENST00000559485 TEX35Q5T0J7 233 aa3□□□□□ -1.93
RGPD1-204ENST00000559485 RSPH4AQ5TD94 716 aa3□□□□□ -1.93
RGPD1-204ENST00000559485 FAM9BQ8IZU0 186 aa3□□□□□ -1.93
RGPD1-204ENST00000559485 PRKRIP1Q9H875 184 aaPredicted RBP3□□□□□ -1.93
RGPD1-204ENST00000559485 KIF14Q15058 1648 aa3□□□□□ -1.93
RGPD1-204ENST00000559485 MYBBP1AQ9BQG0 1328 aaKnown RBP2.99□□□□□ -1.93
RGPD1-204ENST00000559485 PDS5BQ9NTI5 1447 aa2.99□□□□□ -1.93
RGPD1-204ENST00000559485 KIAA2012Q0VF49 1180 aa2.99□□□□□ -1.93
RGPD1-204ENST00000559485 CAVIN1Q6NZI2 390 aaKnown RBP2.99□□□□□ -1.93
RGPD1-204ENST00000559485 CCDC39Q9UFE4 941 aa2.99□□□□□ -1.93
RGPD1-204ENST00000559485 RRP1P56182 461 aaKnown RBP2.99□□□□□ -1.93
RGPD1-204ENST00000559485 RNF20Q5VTR2 975 aa2.99□□□□□ -1.93
RGPD1-204ENST00000559485 ZNF771Q7L3S4 317 aaPredicted RBP2.99□□□□□ -1.93
RGPD1-204ENST00000559485 NAP1L2Q9ULW6 460 aaPredicted RBP2.99□□□□□ -1.93
RGPD1-204ENST00000559485 RNF123Q5XPI4 1314 aa2.99□□□□□ -1.93
RGPD1-204ENST00000559485 DYNC1I1O14576 645 aa2.99□□□□□ -1.93
RGPD1-204ENST00000559485 PLEKHG5O94827 1062 aa2.99□□□□□ -1.93
RGPD1-204ENST00000559485 MCCP23508 829 aa2.99□□□□□ -1.93
RGPD1-204ENST00000559485 CDCA8Q53HL2 280 aa2.99□□□□□ -1.93
RGPD1-204ENST00000559485 B4GALNT3Q6L9W6 998 aa2.99□□□□□ -1.93
RGPD1-204ENST00000559485 TEX2Q8IWB9 1127 aa2.99□□□□□ -1.93
RGPD1-204ENST00000559485 CALCOCO1Q9P1Z2 691 aa2.99□□□□□ -1.93
RGPD1-204ENST00000559485 MAPK8IP3Q9UPT6 1336 aa2.99□□□□□ -1.93
RGPD1-204ENST00000559485 FAM161AQ3B820 660 aa2.98□□□□□ -1.93
RGPD1-204ENST00000559485 CEP120Q8N960 986 aa2.98□□□□□ -1.93
RGPD1-204ENST00000559485 SYAP1Q96A49 352 aaPredicted RBP2.98□□□□□ -1.93
RGPD1-204ENST00000559485 MYH16Q9H6N6 1097 aa2.98□□□□□ -1.93
RGPD1-204ENST00000559485 ARHGEF12Q9NZN5 1544 aa2.98□□□□□ -1.93
RGPD1-204ENST00000559485 PHF14O94880 888 aa2.98□□□□□ -1.93
RGPD1-204ENST00000559485 PDE4AP27815 886 aa2.98□□□□□ -1.93
RGPD1-204ENST00000559485 SSR1P43307 286 aaKnown RBP2.98□□□□□ -1.93
RGPD1-204ENST00000559485 P3H3Q8IVL6 736 aa2.98□□□□□ -1.93
RGPD1-204ENST00000559485 IL27Q8NEV9 243 aa2.98□□□□□ -1.93
RGPD1-204ENST00000559485 FANCD2Q9BXW9 1451 aa2.98□□□□□ -1.93
RGPD1-204ENST00000559485 SCAPERQ9BY12 1400 aa2.98□□□□□ -1.93
RGPD1-204ENST00000559485 BBXQ8WY36 941 aaPredicted RBP2.98□□□□□ -1.93
RGPD1-204ENST00000559485 CHMP4BQ9H444 224 aaKnown RBP2.98□□□□□ -1.93
RGPD1-204ENST00000559485 RCAN3Q9UKA8 241 aa2.98□□□□□ -1.93
RGPD1-204ENST00000559485 CAMSAP2Q08AD1 1489 aa2.98□□□□□ -1.93
RGPD1-204ENST00000559485 HMGB1P1B2RPK0 211 aaPredicted RBP2.98□□□□□ -1.93
RGPD1-204ENST00000559485 CC2D1BQ5T0F9 858 aaKnown RBP2.98□□□□□ -1.93
RGPD1-204ENST00000559485 PIAS4Q8N2W9 510 aaPredicted RBP2.98□□□□□ -1.93
RGPD1-204ENST00000559485 DNMBPQ6XZF7 1577 aa2.98□□□□□ -1.93
RGPD1-204ENST00000559485 UGGT2Q9NYU1 1516 aa2.98□□□□□ -1.93
RGPD1-204ENST00000559485 USP8P40818 1118 aa2.97□□□□□ -1.93
RGPD1-204ENST00000559485 GPS2Q13227 327 aa2.97□□□□□ -1.93
RGPD1-204ENST00000559485 DHX8Q14562 1220 aaKnown RBP2.97□□□□□ -1.93
RGPD1-204ENST00000559485 HS1BP3Q53T59 392 aa2.97□□□□□ -1.93
RGPD1-204ENST00000559485 SIN3AQ96ST3 1273 aa2.97□□□□□ -1.93
RGPD1-204ENST00000559485 HSCBQ8IWL3 235 aa2.97□□□□□ -1.93
RGPD1-204ENST00000559485 FRAT1Q92837 279 aaPredicted RBP2.97□□□□□ -1.93
RGPD1-204ENST00000559485 DIAPH3Q9NSV4 1193 aa2.97□□□□□ -1.93
RGPD1-204ENST00000559485 RPRD2Q5VT52 1461 aaKnown RBP2.97□□□□□ -1.93
RGPD1-204ENST00000559485 ITSN2Q9NZM3 1697 aa2.97□□□□□ -1.93
RGPD1-204ENST00000559485 EIF2AK4Q9P2K8 1649 aaKnown RBP2.97□□□□□ -1.93
RGPD1-204ENST00000559485 HTATSF1O43719 755 aaKnown RBP2.97□□□□□ -1.93
RGPD1-204ENST00000559485 TEX14Q8IWB6 1497 aa2.97□□□□□ -1.93
RGPD1-204ENST00000559485 CCDC94Q9BW85 323 aaPredicted RBP2.97□□□□□ -1.93
RGPD1-204ENST00000559485 BACH2Q9BYV9 841 aa2.97□□□□□ -1.93
RGPD1-204ENST00000559485 KNSTRNQ9Y448 316 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms