RNA–Protein interactions for RNA: ENST00000559243.1

CCDC33-207, Transcript of coiled-coil domain containing 33, humanhuman

TSL 4

Gene CCDC33, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-207ENST00000559243 ARHGEF5Q12774 1597 aa16.94■□□□□ 0.3
CCDC33-207ENST00000559243 LTBP4Q8N2S1 1624 aa16.93■□□□□ 0.3
CCDC33-207ENST00000559243 PKD2Q13563 968 aa16.93■□□□□ 0.3
CCDC33-207ENST00000559243 PLA2R1Q13018 1463 aa16.93■□□□□ 0.3
CCDC33-207ENST00000559243 KANK4Q5T7N3 995 aaPredicted RBP16.91■□□□□ 0.3
CCDC33-207ENST00000559243 WASHC2CQ9Y4E1 1318 aa16.91■□□□□ 0.3
CCDC33-207ENST00000559243 KDM5DQ9BY66 1539 aa16.91■□□□□ 0.3
CCDC33-207ENST00000559243 FBXO31Q5XUX0 539 aaPredicted RBP16.9■□□□□ 0.3
CCDC33-207ENST00000559243 A2ML1A8K2U0 1454 aa16.9■□□□□ 0.3
CCDC33-207ENST00000559243 MAP3K1Q13233 1512 aa16.9■□□□□ 0.3
CCDC33-207ENST00000559243 FAM135AQ9P2D6 1515 aa16.9■□□□□ 0.3
CCDC33-207ENST00000559243 TCOF1Q13428 1488 aaKnown RBP16.89■□□□□ 0.29
CCDC33-207ENST00000559243 TNRQ92752 1358 aa16.88■□□□□ 0.29
CCDC33-207ENST00000559243 PZPP20742 1482 aa16.87■□□□□ 0.29
CCDC33-207ENST00000559243 IQSEC2Q5JU85 1478 aa16.87■□□□□ 0.29
CCDC33-207ENST00000559243 DNMT1P26358 1616 aaKnown RBP16.87■□□□□ 0.29
CCDC33-207ENST00000559243 ZNF335Q9H4Z2 1342 aaPredicted RBP16.87■□□□□ 0.29
CCDC33-207ENST00000559243 MYOM3Q5VTT5 1437 aa16.86■□□□□ 0.29
CCDC33-207ENST00000559243 MIA2Q96PC5 1412 aa16.86■□□□□ 0.29
CCDC33-207ENST00000559243 MAST1Q9Y2H9 1570 aa16.85■□□□□ 0.29
CCDC33-207ENST00000559243 APLP2Q06481 763 aa16.83■□□□□ 0.28
CCDC33-207ENST00000559243 RNF17Q9BXT8 1623 aaKnown RBP16.81■□□□□ 0.28
CCDC33-207ENST00000559243 THEMISQ8N1K5 641 aaPredicted RBP16.8■□□□□ 0.28
CCDC33-207ENST00000559243 NLRP1Q9C000 1473 aa16.8■□□□□ 0.28
CCDC33-207ENST00000559243 POLR1AO95602 1720 aaPredicted RBP16.79■□□□□ 0.28
CCDC33-207ENST00000559243 EIF2AK4Q9P2K8 1649 aaKnown RBP16.79■□□□□ 0.28
CCDC33-207ENST00000559243 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.78■□□□□ 0.28
CCDC33-207ENST00000559243 UBAP1LF5GYI3 381 aa16.78■□□□□ 0.28
CCDC33-207ENST00000559243 ANKLE2Q86XL3 938 aa16.78■□□□□ 0.28
CCDC33-207ENST00000559243 ABCC3O15438 1527 aa16.78■□□□□ 0.28
CCDC33-207ENST00000559243 ZC3H13Q5T200 1668 aaKnown RBP16.78■□□□□ 0.28
CCDC33-207ENST00000559243 UGGT1Q9NYU2 1555 aa16.77■□□□□ 0.28
CCDC33-207ENST00000559243 NEURL4Q96JN8 1562 aa16.77■□□□□ 0.27
CCDC33-207ENST00000559243 DUOX2Q9NRD8 1548 aa16.76■□□□□ 0.27
CCDC33-207ENST00000559243 MROH1Q8NDA8 1641 aa16.74■□□□□ 0.27
CCDC33-207ENST00000559243 PTPN23Q9H3S7 1636 aa16.74■□□□□ 0.27
CCDC33-207ENST00000559243 ABCC5O15440 1437 aa16.74■□□□□ 0.27
CCDC33-207ENST00000559243 CFAP65Q6ZU64 1925 aaKnown RBP16.74■□□□□ 0.27
CCDC33-207ENST00000559243 KIF15Q9NS87 1388 aa16.74■□□□□ 0.27
CCDC33-207ENST00000559243 RRP7BPQ9NSQ0 103 aa16.73■□□□□ 0.27
CCDC33-207ENST00000559243 CEP152O94986 1710 aa16.73■□□□□ 0.27
CCDC33-207ENST00000559243 ERVK-7P63135 1459 aa16.73■□□□□ 0.27
CCDC33-207ENST00000559243 SHANK2Q9UPX8 1470 aa16.73■□□□□ 0.27
CCDC33-207ENST00000559243 CROCC2H7BZ55 1655 aa16.72■□□□□ 0.27
CCDC33-207ENST00000559243 NPHP4O75161 1426 aaPredicted RBP16.71■□□□□ 0.27
CCDC33-207ENST00000559243 MED14O60244 1454 aa16.71■□□□□ 0.27
CCDC33-207ENST00000559243 DAPK1P53355 1430 aa16.7■□□□□ 0.26
CCDC33-207ENST00000559243 FGD6Q6ZV73 1430 aa16.7■□□□□ 0.26
CCDC33-207ENST00000559243 ERBINQ96RT1 1412 aa16.7■□□□□ 0.26
CCDC33-207ENST00000559243 CPS1P31327 1500 aa16.7■□□□□ 0.26
CCDC33-207ENST00000559243 DEPDC5O75140 1603 aa16.7■□□□□ 0.26
CCDC33-207ENST00000559243 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.68■□□□□ 0.26
CCDC33-207ENST00000559243 PRDM15P57071 1507 aaPredicted RBP16.68■□□□□ 0.26
CCDC33-207ENST00000559243 CHIC2Q9UKJ5 165 aa16.67■□□□□ 0.26
CCDC33-207ENST00000559243 VWDEQ8N2E2 1590 aa16.67■□□□□ 0.26
CCDC33-207ENST00000559243 ANKRD30AQ9BXX3 1397 aa16.66■□□□□ 0.26
CCDC33-207ENST00000559243 IQGAP1P46940 1657 aa16.66■□□□□ 0.26
CCDC33-207ENST00000559243 TOM1O60784 492 aa16.66■□□□□ 0.26
CCDC33-207ENST00000559243 MED1Q15648 1581 aaPredicted RBP16.66■□□□□ 0.26
CCDC33-207ENST00000559243 ARHGAP31Q2M1Z3 1444 aa16.66■□□□□ 0.26
CCDC33-207ENST00000559243 SCAF1Q9H7N4 1312 aaKnown RBP16.66■□□□□ 0.26
CCDC33-207ENST00000559243 KANK1Q14678 1352 aa16.65■□□□□ 0.26
CCDC33-207ENST00000559243 UBR1Q8IWV7 1749 aa16.65■□□□□ 0.26
CCDC33-207ENST00000559243 PIP4K2BP78356 416 aa16.64■□□□□ 0.25
CCDC33-207ENST00000559243 SCAF11Q99590 1463 aaKnown RBP16.61■□□□□ 0.25
CCDC33-207ENST00000559243 FAM50AQ14320 339 aaKnown RBP16.6■□□□□ 0.25
CCDC33-207ENST00000559243 TXNDC2Q86VQ3 553 aa16.6■□□□□ 0.25
CCDC33-207ENST00000559243 LTKP29376 864 aa16.59■□□□□ 0.25
CCDC33-207ENST00000559243 HSPA1LP34931 641 aa16.59■□□□□ 0.25
CCDC33-207ENST00000559243 STAG3Q9UJ98 1225 aa16.59■□□□□ 0.25
CCDC33-207ENST00000559243 EID1Q9Y6B2 187 aa16.59■□□□□ 0.25
CCDC33-207ENST00000559243 ARHGAP23Q9P227 1491 aa16.59■□□□□ 0.25
CCDC33-207ENST00000559243 SLIT1O75093 1534 aa16.59■□□□□ 0.25
CCDC33-207ENST00000559243 STRCP1A6NGW2 1772 aa16.59■□□□□ 0.25
CCDC33-207ENST00000559243 LMTK2Q8IWU2 1503 aa16.58■□□□□ 0.24
CCDC33-207ENST00000559243 PIK3C2BO00750 1634 aa16.57■□□□□ 0.24
CCDC33-207ENST00000559243 LRRC7Q96NW7 1537 aa16.57■□□□□ 0.24
CCDC33-207ENST00000559243 ADGRL2O95490 1459 aa16.56■□□□□ 0.24
CCDC33-207ENST00000559243 TMEM2Q9UHN6 1383 aa16.55■□□□□ 0.24
CCDC33-207ENST00000559243 IDI1Q13907 227 aa16.55■□□□□ 0.24
CCDC33-207ENST00000559243 SYNMO15061 1565 aa16.55■□□□□ 0.24
CCDC33-207ENST00000559243 EFCAB6Q5THR3 1501 aa16.53■□□□□ 0.24
CCDC33-207ENST00000559243 ANKRD50Q9ULJ7 1429 aa16.53■□□□□ 0.24
CCDC33-207ENST00000559243 ALKQ9UM73 1620 aa16.52■□□□□ 0.24
CCDC33-207ENST00000559243 KDM5AP29375 1690 aaKnown RBP16.52■□□□□ 0.23
CCDC33-207ENST00000559243 NOS1P29475 1434 aa16.52■□□□□ 0.23
CCDC33-207ENST00000559243 PHF23Q9BUL5 403 aaPredicted RBP16.5■□□□□ 0.23
CCDC33-207ENST00000559243 SLC52A1Q9NWF4 448 aa16.5■□□□□ 0.23
CCDC33-207ENST00000559243 SENP3Q9H4L4 574 aaPredicted RBP16.48■□□□□ 0.23
CCDC33-207ENST00000559243 RPRD2Q5VT52 1461 aaKnown RBP16.48■□□□□ 0.23
CCDC33-207ENST00000559243 ADGRB3O60242 1522 aa16.47■□□□□ 0.23
CCDC33-207ENST00000559243 SLC26A8Q96RN1 970 aa16.46■□□□□ 0.23
CCDC33-207ENST00000559243 XIRP1Q702N8 1843 aaKnown RBP16.45■□□□□ 0.22
CCDC33-207ENST00000559243 TET3O43151 1660 aa16.45■□□□□ 0.22
CCDC33-207ENST00000559243 KCNA6P17658 529 aa16.44■□□□□ 0.22
CCDC33-207ENST00000559243 BCANQ96GW7 911 aa16.44■□□□□ 0.22
CCDC33-207ENST00000559243 TMEM94Q12767 1356 aa16.42■□□□□ 0.22
CCDC33-207ENST00000559243 ROCK1Q13464 1354 aa16.42■□□□□ 0.22
CCDC33-207ENST00000559243 GCC2Q8IWJ2 1684 aa16.42■□□□□ 0.22
CCDC33-207ENST00000559243 UNC13BO14795 1591 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms