RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 POLR1AO95602 1720 aaPredicted RBP15.65■□□□□ 0.1
CLPX-204ENST00000559152 ZNF326Q5BKZ1 582 aaKnown RBP15.65■□□□□ 0.1
CLPX-204ENST00000559152 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.64■□□□□ 0.09
CLPX-204ENST00000559152 ATP10AO60312 1499 aa15.64■□□□□ 0.09
CLPX-204ENST00000559152 NPM1P06748 294 aaKnown RBP eCLIP15.64■□□□□ 0.09
CLPX-204ENST00000559152 KIF7Q2M1P5 1343 aa15.64■□□□□ 0.09
CLPX-204ENST00000559152 FANCAO15360 1455 aa15.63■□□□□ 0.09
CLPX-204ENST00000559152 C11orf95C9JLR9 678 aaPredicted RBP15.63■□□□□ 0.09
CLPX-204ENST00000559152 DCAF11Q8TEB1 546 aa15.63■□□□□ 0.09
CLPX-204ENST00000559152 ASXL2Q76L83 1435 aa15.62■□□□□ 0.09
CLPX-204ENST00000559152 CARD11Q9BXL7 1154 aa15.62■□□□□ 0.09
CLPX-204ENST00000559152 KDM5CP41229 1560 aa15.61■□□□□ 0.09
CLPX-204ENST00000559152 ZFYVE16Q7Z3T8 1539 aa15.6■□□□□ 0.09
CLPX-204ENST00000559152 ROCK2O75116 1388 aaKnown RBP15.6■□□□□ 0.09
CLPX-204ENST00000559152 PLA2R1Q13018 1463 aa15.59■□□□□ 0.09
CLPX-204ENST00000559152 AFAP1Q8N556 730 aa15.59■□□□□ 0.09
CLPX-204ENST00000559152 KDM2AQ9Y2K7 1162 aa15.59■□□□□ 0.09
CLPX-204ENST00000559152 ADGRL1O94910 1474 aa15.58■□□□□ 0.08
CLPX-204ENST00000559152 PRKRIP1Q9H875 184 aaPredicted RBP15.58■□□□□ 0.08
CLPX-204ENST00000559152 PELP1Q8IZL8 1130 aaKnown RBP15.57■□□□□ 0.08
CLPX-204ENST00000559152 ATP7AQ04656 1500 aa15.56■□□□□ 0.08
CLPX-204ENST00000559152 PRAG1Q86YV5 1406 aa15.56■□□□□ 0.08
CLPX-204ENST00000559152 SCAPERQ9BY12 1400 aa15.56■□□□□ 0.08
CLPX-204ENST00000559152 KANK1Q14678 1352 aa15.56■□□□□ 0.08
CLPX-204ENST00000559152 INO80Q9ULG1 1556 aaPredicted RBP15.55■□□□□ 0.08
CLPX-204ENST00000559152 STAC3Q96MF2 364 aa15.55■□□□□ 0.08
CLPX-204ENST00000559152 DEPDC5O75140 1603 aa15.53■□□□□ 0.08
CLPX-204ENST00000559152 DHX29Q7Z478 1369 aaKnown RBP15.53■□□□□ 0.08
CLPX-204ENST00000559152 EIF2AK4Q9P2K8 1649 aaKnown RBP15.53■□□□□ 0.08
CLPX-204ENST00000559152 A2MP01023 1474 aa15.52■□□□□ 0.08
CLPX-204ENST00000559152 GPRASP1Q5JY77 1395 aa15.52■□□□□ 0.08
CLPX-204ENST00000559152 RGL3Q3MIN7 710 aa15.52■□□□□ 0.07
CLPX-204ENST00000559152 BCORL1Q5H9F3 1711 aa15.51■□□□□ 0.07
CLPX-204ENST00000559152 CFAP74Q9C0B2 1584 aa15.51■□□□□ 0.07
CLPX-204ENST00000559152 MYT1LQ9UL68 1186 aa15.51■□□□□ 0.07
CLPX-204ENST00000559152 TRPM1Q7Z4N2 1603 aa15.51■□□□□ 0.07
CLPX-204ENST00000559152 SUPT16HQ9Y5B9 1047 aaKnown RBP15.51■□□□□ 0.07
CLPX-204ENST00000559152 ZNF518AQ6AHZ1 1483 aa15.5■□□□□ 0.07
CLPX-204ENST00000559152 LAMC1P11047 1609 aa15.5■□□□□ 0.07
CLPX-204ENST00000559152 ST20-MTHFSA0A0A6YYL1 179 aa15.5■□□□□ 0.07
CLPX-204ENST00000559152 PTPRTO14522 1441 aa15.49■□□□□ 0.07
CLPX-204ENST00000559152 TRPM2O94759 1503 aa15.49■□□□□ 0.07
CLPX-204ENST00000559152 CD109Q6YHK3 1445 aa15.48■□□□□ 0.07
CLPX-204ENST00000559152 TET3O43151 1660 aa15.48■□□□□ 0.07
CLPX-204ENST00000559152 VWDEQ8N2E2 1590 aa15.48■□□□□ 0.07
CLPX-204ENST00000559152 HNRNPUQ00839 825 aaKnown RBP eCLIP15.47■□□□□ 0.07
CLPX-204ENST00000559152 MRS2Q9HD23 443 aa15.47■□□□□ 0.07
CLPX-204ENST00000559152 E9PCH4 1651 aa15.47■□□□□ 0.07
CLPX-204ENST00000559152 KIF3BO15066 747 aa15.47■□□□□ 0.07
CLPX-204ENST00000559152 POLR3GLQ9BT43 218 aa15.47■□□□□ 0.07
CLPX-204ENST00000559152 KTN1Q86UP2 1357 aaKnown RBP15.46■□□□□ 0.07
CLPX-204ENST00000559152 PRDM15P57071 1507 aaPredicted RBP15.46■□□□□ 0.07
CLPX-204ENST00000559152 NEFLP07196 543 aa15.45■□□□□ 0.06
CLPX-204ENST00000559152 NEURL4Q96JN8 1562 aa15.44■□□□□ 0.06
CLPX-204ENST00000559152 SPHKAPQ2M3C7 1700 aa15.43■□□□□ 0.06
CLPX-204ENST00000559152 MLH3Q9UHC1 1453 aa15.43■□□□□ 0.06
CLPX-204ENST00000559152 POGZQ7Z3K3 1410 aa15.43■□□□□ 0.06
CLPX-204ENST00000559152 NBPF1Q3BBV0 1214 aa15.42■□□□□ 0.06
CLPX-204ENST00000559152 KIDINS220Q9ULH0 1771 aa15.42■□□□□ 0.06
CLPX-204ENST00000559152 NEO1Q92859 1461 aa15.41■□□□□ 0.06
CLPX-204ENST00000559152 CEP152O94986 1710 aa15.41■□□□□ 0.06
CLPX-204ENST00000559152 LMTK2Q8IWU2 1503 aa15.4■□□□□ 0.06
CLPX-204ENST00000559152 RALBP1Q15311 655 aa15.4■□□□□ 0.06
CLPX-204ENST00000559152 CCDC184Q52MB2 194 aa15.4■□□□□ 0.06
CLPX-204ENST00000559152 FAM9BQ8IZU0 186 aa15.39■□□□□ 0.05
CLPX-204ENST00000559152 MROH1Q8NDA8 1641 aa15.39■□□□□ 0.05
CLPX-204ENST00000559152 RNF17Q9BXT8 1623 aaKnown RBP15.38■□□□□ 0.05
CLPX-204ENST00000559152 TMF1P82094 1093 aa15.38■□□□□ 0.05
CLPX-204ENST00000559152 CLTCL1P53675 1640 aa15.38■□□□□ 0.05
CLPX-204ENST00000559152 EFCAB6Q5THR3 1501 aa15.37■□□□□ 0.05
CLPX-204ENST00000559152 WASHC2CQ9Y4E1 1318 aa15.37■□□□□ 0.05
CLPX-204ENST00000559152 COL17A1Q9UMD9 1497 aaPredicted RBP15.37■□□□□ 0.05
CLPX-204ENST00000559152 HECW2Q9P2P5 1572 aa15.37■□□□□ 0.05
CLPX-204ENST00000559152 ZBED9Q6R2W3 1325 aa15.37■□□□□ 0.05
CLPX-204ENST00000559152 MADDQ8WXG6 1647 aa15.37■□□□□ 0.05
CLPX-204ENST00000559152 FKBP8Q14318 412 aa15.36■□□□□ 0.05
CLPX-204ENST00000559152 TESK2Q96S53 571 aa15.36■□□□□ 0.05
CLPX-204ENST00000559152 SLC24A1O60721 1099 aa15.35■□□□□ 0.05
CLPX-204ENST00000559152 CDCA8Q53HL2 280 aa15.34■□□□□ 0.05
CLPX-204ENST00000559152 TSPOAP1O95153 1857 aa15.34■□□□□ 0.05
CLPX-204ENST00000559152 MYBBP1AQ9BQG0 1328 aaKnown RBP15.33■□□□□ 0.05
CLPX-204ENST00000559152 TMC1Q8TDI8 760 aa15.33■□□□□ 0.05
CLPX-204ENST00000559152 BRD4O60885 1362 aaPredicted RBP15.33■□□□□ 0.04
CLPX-204ENST00000559152 MYOM2P54296 1465 aa15.33■□□□□ 0.04
CLPX-204ENST00000559152 SCAF11Q99590 1463 aaKnown RBP15.33■□□□□ 0.04
CLPX-204ENST00000559152 EIF3AQ14152 1382 aaKnown RBP15.32■□□□□ 0.04
CLPX-204ENST00000559152 KIAA1210Q9ULL0 1709 aa15.32■□□□□ 0.04
CLPX-204ENST00000559152 DIP2BQ9P265 1576 aa15.3■□□□□ 0.04
CLPX-204ENST00000559152 DISP3Q9P2K9 1392 aa15.3■□□□□ 0.04
CLPX-204ENST00000559152 PPRC1Q5VV67 1664 aaKnown RBP15.3■□□□□ 0.04
CLPX-204ENST00000559152 FRMPD1Q5SYB0 1578 aa15.3■□□□□ 0.04
CLPX-204ENST00000559152 GLI2P10070 1586 aa15.29■□□□□ 0.04
CLPX-204ENST00000559152 IQGAP1P46940 1657 aa15.29■□□□□ 0.04
CLPX-204ENST00000559152 FAM69CQ0P6D2 419 aa15.29■□□□□ 0.04
CLPX-204ENST00000559152 PNISRQ8TF01 805 aaKnown RBP15.29■□□□□ 0.04
CLPX-204ENST00000559152 KIF1BO60333 1816 aa15.28■□□□□ 0.04
CLPX-204ENST00000559152 KIF13AQ9H1H9 1805 aa15.28■□□□□ 0.04
CLPX-204ENST00000559152 PER1O15534 1290 aaPredicted RBP15.28■□□□□ 0.04
CLPX-204ENST00000559152 ERICH6BQ5W0A0 696 aa15.28■□□□□ 0.04
CLPX-204ENST00000559152 PARD3Q8TEW0 1356 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms