RNA–Protein interactions for RNA: ENST00000559035.5

HMG20A-207, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-207ENST00000559035 RTEL1-TNFRSF6BF6WH68 1400 aa12.42□□□□□ -0.42
HMG20A-207ENST00000559035 SYNMO15061 1565 aa12.41□□□□□ -0.42
HMG20A-207ENST00000559035 EHMT2Q96KQ7 1210 aa12.41□□□□□ -0.42
HMG20A-207ENST00000559035 ZNF777Q9ULD5 760 aaPredicted RBP12.4□□□□□ -0.42
HMG20A-207ENST00000559035 TNRQ92752 1358 aa12.4□□□□□ -0.42
HMG20A-207ENST00000559035 RNF17Q9BXT8 1623 aaKnown RBP12.4□□□□□ -0.42
HMG20A-207ENST00000559035 STRCP1A6NGW2 1772 aa12.39□□□□□ -0.43
HMG20A-207ENST00000559035 EHBP1L1Q8N3D4 1523 aa12.39□□□□□ -0.43
HMG20A-207ENST00000559035 CCNB3Q8WWL7 1395 aa12.39□□□□□ -0.43
HMG20A-207ENST00000559035 NLRP1Q9C000 1473 aa12.39□□□□□ -0.43
HMG20A-207ENST00000559035 GGT6Q6P531 493 aa12.38□□□□□ -0.43
HMG20A-207ENST00000559035 DHX29Q7Z478 1369 aaKnown RBP12.38□□□□□ -0.43
HMG20A-207ENST00000559035 IQGAP1P46940 1657 aa12.38□□□□□ -0.43
HMG20A-207ENST00000559035 CFDP1Q9UEE9 299 aaPredicted RBP12.37□□□□□ -0.43
HMG20A-207ENST00000559035 ZC3H13Q5T200 1668 aaKnown RBP12.36□□□□□ -0.43
HMG20A-207ENST00000559035 UGGT1Q9NYU2 1555 aa12.36□□□□□ -0.43
HMG20A-207ENST00000559035 NPHP4O75161 1426 aaPredicted RBP12.36□□□□□ -0.43
HMG20A-207ENST00000559035 CEP162Q5TB80 1403 aa12.36□□□□□ -0.43
HMG20A-207ENST00000559035 CCDC141Q6ZP82 1450 aa12.35□□□□□ -0.43
HMG20A-207ENST00000559035 TOM1O60784 492 aa12.35□□□□□ -0.43
HMG20A-207ENST00000559035 LRRC7Q96NW7 1537 aa12.35□□□□□ -0.43
HMG20A-207ENST00000559035 ZNF644Q9H582 1327 aaPredicted RBP12.35□□□□□ -0.43
HMG20A-207ENST00000559035 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.34□□□□□ -0.43
HMG20A-207ENST00000559035 PIP4K2BP78356 416 aa12.34□□□□□ -0.43
HMG20A-207ENST00000559035 MIA2Q96PC5 1412 aa12.34□□□□□ -0.43
HMG20A-207ENST00000559035 MTUS2Q5JR59 1369 aa12.33□□□□□ -0.44
HMG20A-207ENST00000559035 FBXO31Q5XUX0 539 aaPredicted RBP12.33□□□□□ -0.44
HMG20A-207ENST00000559035 CAMSAP2Q08AD1 1489 aa12.33□□□□□ -0.44
HMG20A-207ENST00000559035 MROH1Q8NDA8 1641 aa12.33□□□□□ -0.44
HMG20A-207ENST00000559035 ARHGEF5Q12774 1597 aa12.32□□□□□ -0.44
HMG20A-207ENST00000559035 SCAF1Q9H7N4 1312 aaKnown RBP12.32□□□□□ -0.44
HMG20A-207ENST00000559035 ABCC3O15438 1527 aa12.32□□□□□ -0.44
HMG20A-207ENST00000559035 CHIC1Q5VXU3 224 aa12.31□□□□□ -0.44
HMG20A-207ENST00000559035 ERVK-7P63135 1459 aa12.3□□□□□ -0.44
HMG20A-207ENST00000559035 XIRP1Q702N8 1843 aaKnown RBP12.3□□□□□ -0.44
HMG20A-207ENST00000559035 EIF2AK4Q9P2K8 1649 aaKnown RBP12.29□□□□□ -0.44
HMG20A-207ENST00000559035 UBR1Q8IWV7 1749 aa12.29□□□□□ -0.44
HMG20A-207ENST00000559035 MAST1Q9Y2H9 1570 aa12.29□□□□□ -0.44
HMG20A-207ENST00000559035 ANKLE2Q86XL3 938 aa12.28□□□□□ -0.44
HMG20A-207ENST00000559035 ARHGAP23Q9P227 1491 aa12.27□□□□□ -0.44
HMG20A-207ENST00000559035 KIF3BO15066 747 aa12.27□□□□□ -0.45
HMG20A-207ENST00000559035 THEMISQ8N1K5 641 aaPredicted RBP12.27□□□□□ -0.45
HMG20A-207ENST00000559035 NCOA2Q15596 1464 aa12.27□□□□□ -0.45
HMG20A-207ENST00000559035 SLIT1O75093 1534 aa12.27□□□□□ -0.45
HMG20A-207ENST00000559035 PHF23Q9BUL5 403 aaPredicted RBP12.26□□□□□ -0.45
HMG20A-207ENST00000559035 RGS17Q9UGC6 210 aaPredicted RBP12.26□□□□□ -0.45
HMG20A-207ENST00000559035 SCAF11Q99590 1463 aaKnown RBP12.25□□□□□ -0.45
HMG20A-207ENST00000559035 WASHC2CQ9Y4E1 1318 aa12.24□□□□□ -0.45
HMG20A-207ENST00000559035 CEP152O94986 1710 aa12.23□□□□□ -0.45
HMG20A-207ENST00000559035 PRDM15P57071 1507 aaPredicted RBP12.23□□□□□ -0.45
HMG20A-207ENST00000559035 MAP3K1Q13233 1512 aa12.21□□□□□ -0.45
HMG20A-207ENST00000559035 RSPH4AQ5TD94 716 aa12.2□□□□□ -0.46
HMG20A-207ENST00000559035 ARHGAP31Q2M1Z3 1444 aa12.2□□□□□ -0.46
HMG20A-207ENST00000559035 FAM135BQ49AJ0 1406 aa12.2□□□□□ -0.46
HMG20A-207ENST00000559035 KDM5AP29375 1690 aaKnown RBP12.19□□□□□ -0.46
HMG20A-207ENST00000559035 NWD1Q149M9 1564 aa12.18□□□□□ -0.46
HMG20A-207ENST00000559035 PIK3C2BO00750 1634 aa12.18□□□□□ -0.46
HMG20A-207ENST00000559035 ROBO1Q9Y6N7 1651 aa12.17□□□□□ -0.46
HMG20A-207ENST00000559035 SETD1AO15047 1707 aaKnown RBP12.17□□□□□ -0.46
HMG20A-207ENST00000559035 DUOX2Q9NRD8 1548 aa12.16□□□□□ -0.46
HMG20A-207ENST00000559035 CROCC2H7BZ55 1655 aa12.16□□□□□ -0.46
HMG20A-207ENST00000559035 LTKP29376 864 aa12.15□□□□□ -0.46
HMG20A-207ENST00000559035 TET3O43151 1660 aa12.15□□□□□ -0.46
HMG20A-207ENST00000559035 LRRC9Q6ZRR7 1453 aa12.14□□□□□ -0.47
HMG20A-207ENST00000559035 POTEAQ6S8J7 498 aa12.14□□□□□ -0.47
HMG20A-207ENST00000559035 NKTRP30414 1462 aaKnown RBP12.14□□□□□ -0.47
HMG20A-207ENST00000559035 SENP3Q9H4L4 574 aaPredicted RBP12.13□□□□□ -0.47
HMG20A-207ENST00000559035 TMEM2Q9UHN6 1383 aa12.13□□□□□ -0.47
HMG20A-207ENST00000559035 ERBINQ96RT1 1412 aa12.12□□□□□ -0.47
HMG20A-207ENST00000559035 EFCAB6Q5THR3 1501 aa12.12□□□□□ -0.47
HMG20A-207ENST00000559035 LMTK2Q8IWU2 1503 aa12.12□□□□□ -0.47
HMG20A-207ENST00000559035 TMEM94Q12767 1356 aa12.12□□□□□ -0.47
HMG20A-207ENST00000559035 CFAP65Q6ZU64 1925 aaKnown RBP12.1□□□□□ -0.47
HMG20A-207ENST00000559035 TSPY4P0CV99 314 aa12.1□□□□□ -0.47
HMG20A-207ENST00000559035 TSPY10P0CW01 314 aa12.1□□□□□ -0.47
HMG20A-207ENST00000559035 COL16A1Q07092 1604 aaPredicted RBP12.1□□□□□ -0.47
HMG20A-207ENST00000559035 ADGRB3O60242 1522 aa12.1□□□□□ -0.47
HMG20A-207ENST00000559035 MYOM3Q5VTT5 1437 aa12.1□□□□□ -0.47
HMG20A-207ENST00000559035 KIF15Q9NS87 1388 aa12.08□□□□□ -0.48
HMG20A-207ENST00000559035 SRCAPQ6ZRS2 3230 aa12.08□□□□□ -0.48
HMG20A-207ENST00000559035 TXNDC2Q86VQ3 553 aa12.08□□□□□ -0.48
HMG20A-207ENST00000559035 PHLPP1O60346 1717 aa12.08□□□□□ -0.48
HMG20A-207ENST00000559035 NOS1P29475 1434 aa12.07□□□□□ -0.48
HMG20A-207ENST00000559035 VPS8Q8N3P4 1428 aa12.07□□□□□ -0.48
HMG20A-207ENST00000559035 LRP6O75581 1613 aa12.07□□□□□ -0.48
HMG20A-207ENST00000559035 ABCC5O15440 1437 aa12.05□□□□□ -0.48
HMG20A-207ENST00000559035 KCNA6P17658 529 aa12.05□□□□□ -0.48
HMG20A-207ENST00000559035 ZFYVE9O95405 1425 aa12.04□□□□□ -0.48
HMG20A-207ENST00000559035 EID1Q9Y6B2 187 aa12.04□□□□□ -0.48
HMG20A-207ENST00000559035 AHDC1Q5TGY3 1603 aaPredicted RBP12.04□□□□□ -0.48
HMG20A-207ENST00000559035 JCADQ9P266 1359 aa12.04□□□□□ -0.48
HMG20A-207ENST00000559035 SHPRHQ149N8 1683 aa12.03□□□□□ -0.48
HMG20A-207ENST00000559035 CHD2O14647 1828 aaKnown RBP12.03□□□□□ -0.48
HMG20A-207ENST00000559035 FGD6Q6ZV73 1430 aa12.03□□□□□ -0.48
HMG20A-207ENST00000559035 PTPN23Q9H3S7 1636 aa12.02□□□□□ -0.49
HMG20A-207ENST00000559035 DAPK1P53355 1430 aa12.02□□□□□ -0.49
HMG20A-207ENST00000559035 DIP2AQ14689 1571 aa12.01□□□□□ -0.49
HMG20A-207ENST00000559035 MSH6P52701 1360 aa12.01□□□□□ -0.49
HMG20A-207ENST00000559035 IDI1Q13907 227 aa12□□□□□ -0.49
HMG20A-207ENST00000559035 KANK4Q5T7N3 995 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms