RNA–Protein interactions for RNA: ENST00000559016.1

COPS2-206, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 4

Gene COPS2, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-206ENST00000559016 C19orf67A6NJJ6 358 aa12.43□□□□□ -0.42
COPS2-206ENST00000559016 PRR29P0C7W0 189 aa12.43□□□□□ -0.42
COPS2-206ENST00000559016 EFCAB2Q5VUJ9 269 aa12.43□□□□□ -0.42
COPS2-206ENST00000559016 NPM1P06748 294 aaKnown RBP eCLIP12.42□□□□□ -0.42
COPS2-206ENST00000559016 PLXNC1O60486 1568 aa12.41□□□□□ -0.42
COPS2-206ENST00000559016 ANKRD50Q9ULJ7 1429 aa12.4□□□□□ -0.42
COPS2-206ENST00000559016 KCNH8Q96L42 1107 aa12.4□□□□□ -0.42
COPS2-206ENST00000559016 ABCC1P33527 1531 aa12.4□□□□□ -0.42
COPS2-206ENST00000559016 SYCP2Q9BX26 1530 aa12.4□□□□□ -0.42
COPS2-206ENST00000559016 ASXL2Q76L83 1435 aa12.39□□□□□ -0.43
COPS2-206ENST00000559016 KDM5DQ9BY66 1539 aa12.39□□□□□ -0.43
COPS2-206ENST00000559016 TRIM52Q96A61 297 aa12.39□□□□□ -0.43
COPS2-206ENST00000559016 MPHOSPH9Q99550 1183 aa12.39□□□□□ -0.43
COPS2-206ENST00000559016 HNRNPMP52272 730 aaKnown RBP eCLIP12.38□□□□□ -0.43
COPS2-206ENST00000559016 DENND4BO75064 1496 aaPredicted RBP12.38□□□□□ -0.43
COPS2-206ENST00000559016 FKBP8Q14318 412 aa12.37□□□□□ -0.43
COPS2-206ENST00000559016 CFAP74Q9C0B2 1584 aa12.37□□□□□ -0.43
COPS2-206ENST00000559016 RTEL1-TNFRSF6BF6WH68 1400 aa12.37□□□□□ -0.43
COPS2-206ENST00000559016 KIF15Q9NS87 1388 aa12.36□□□□□ -0.43
COPS2-206ENST00000559016 SIN3AQ96ST3 1273 aa12.35□□□□□ -0.43
COPS2-206ENST00000559016 DUOX2Q9NRD8 1548 aa12.35□□□□□ -0.43
COPS2-206ENST00000559016 PZPP20742 1482 aa12.34□□□□□ -0.43
COPS2-206ENST00000559016 TONSLQ96HA7 1378 aa12.34□□□□□ -0.43
COPS2-206ENST00000559016 PPP1R15AO75807 674 aaPredicted RBP12.34□□□□□ -0.43
COPS2-206ENST00000559016 ARHGEF12Q9NZN5 1544 aa12.33□□□□□ -0.44
COPS2-206ENST00000559016 NEUROD1Q13562 356 aa12.33□□□□□ -0.44
COPS2-206ENST00000559016 UNC13BO14795 1591 aa12.33□□□□□ -0.44
COPS2-206ENST00000559016 FANCAO15360 1455 aa12.33□□□□□ -0.44
COPS2-206ENST00000559016 ANKRD30BQ9BXX2 1392 aa12.32□□□□□ -0.44
COPS2-206ENST00000559016 ERBINQ96RT1 1412 aa12.32□□□□□ -0.44
COPS2-206ENST00000559016 GABBR2O75899 941 aa12.32□□□□□ -0.44
COPS2-206ENST00000559016 RIMBP3CA6NJZ7 1639 aa12.31□□□□□ -0.44
COPS2-206ENST00000559016 RIMBP3BA6NNM3 1639 aa12.31□□□□□ -0.44
COPS2-206ENST00000559016 RIMBP3Q9UFD9 1639 aa12.31□□□□□ -0.44
COPS2-206ENST00000559016 DIEXFQ68CQ4 756 aaKnown RBP12.31□□□□□ -0.44
COPS2-206ENST00000559016 CHADLQ6NUI6 762 aa12.31□□□□□ -0.44
COPS2-206ENST00000559016 RPRD2Q5VT52 1461 aaKnown RBP12.31□□□□□ -0.44
COPS2-206ENST00000559016 GLI2P10070 1586 aa12.28□□□□□ -0.44
COPS2-206ENST00000559016 INO80Q9ULG1 1556 aaPredicted RBP12.28□□□□□ -0.44
COPS2-206ENST00000559016 IQGAP3Q86VI3 1631 aa12.28□□□□□ -0.44
COPS2-206ENST00000559016 NUP155O75694 1391 aa12.28□□□□□ -0.44
COPS2-206ENST00000559016 TRAPPC8Q9Y2L5 1435 aa12.28□□□□□ -0.44
COPS2-206ENST00000559016 ADGRL1O94910 1474 aa12.27□□□□□ -0.44
COPS2-206ENST00000559016 MAGI2Q86UL8 1455 aa12.27□□□□□ -0.44
COPS2-206ENST00000559016 ZFYVE16Q7Z3T8 1539 aa12.27□□□□□ -0.44
COPS2-206ENST00000559016 CLCN6P51797 869 aa12.27□□□□□ -0.45
COPS2-206ENST00000559016 CD109Q6YHK3 1445 aa12.27□□□□□ -0.45
COPS2-206ENST00000559016 SPAG9O60271 1321 aaKnown RBP12.26□□□□□ -0.45
COPS2-206ENST00000559016 NEO1Q92859 1461 aa12.26□□□□□ -0.45
COPS2-206ENST00000559016 FAM135AQ9P2D6 1515 aa12.26□□□□□ -0.45
COPS2-206ENST00000559016 EIF2AK4Q9P2K8 1649 aaKnown RBP12.26□□□□□ -0.45
COPS2-206ENST00000559016 SCAPERQ9BY12 1400 aa12.25□□□□□ -0.45
COPS2-206ENST00000559016 ZNF518AQ6AHZ1 1483 aa12.25□□□□□ -0.45
COPS2-206ENST00000559016 ATP7AQ04656 1500 aa12.25□□□□□ -0.45
COPS2-206ENST00000559016 MAP3K4Q9Y6R4 1608 aa12.25□□□□□ -0.45
COPS2-206ENST00000559016 DEPDC5O75140 1603 aa12.23□□□□□ -0.45
COPS2-206ENST00000559016 PKD2Q13563 968 aa12.23□□□□□ -0.45
COPS2-206ENST00000559016 KDM5CP41229 1560 aa12.22□□□□□ -0.45
COPS2-206ENST00000559016 LHX8Q68G74 356 aa12.22□□□□□ -0.45
COPS2-206ENST00000559016 TEX14Q8IWB6 1497 aa12.21□□□□□ -0.45
COPS2-206ENST00000559016 ATP10AO60312 1499 aa12.21□□□□□ -0.46
COPS2-206ENST00000559016 MLH3Q9UHC1 1453 aa12.21□□□□□ -0.46
COPS2-206ENST00000559016 KIDINS220Q9ULH0 1771 aa12.2□□□□□ -0.46
COPS2-206ENST00000559016 CD44P16070 742 aaKnown RBP12.2□□□□□ -0.46
COPS2-206ENST00000559016 AMER1Q5JTC6 1135 aaPredicted RBP12.2□□□□□ -0.46
COPS2-206ENST00000559016 CYB5RLQ6IPT4 315 aa12.2□□□□□ -0.46
COPS2-206ENST00000559016 AFAP1Q8N556 730 aa12.2□□□□□ -0.46
COPS2-206ENST00000559016 BCORL1Q5H9F3 1711 aa12.2□□□□□ -0.46
COPS2-206ENST00000559016 POGZQ7Z3K3 1410 aa12.2□□□□□ -0.46
COPS2-206ENST00000559016 DHX29Q7Z478 1369 aaKnown RBP12.18□□□□□ -0.46
COPS2-206ENST00000559016 L3MBTL2Q969R5 705 aa12.18□□□□□ -0.46
COPS2-206ENST00000559016 RTN4Q9NQC3 1192 aaKnown RBP12.18□□□□□ -0.46
COPS2-206ENST00000559016 FARP1Q9Y4F1 1045 aaPredicted RBP12.18□□□□□ -0.46
COPS2-206ENST00000559016 VWDEQ8N2E2 1590 aa12.18□□□□□ -0.46
COPS2-206ENST00000559016 HECW2Q9P2P5 1572 aa12.18□□□□□ -0.46
COPS2-206ENST00000559016 DIP2BQ9P265 1576 aa12.17□□□□□ -0.46
COPS2-206ENST00000559016 TET3O43151 1660 aa12.16□□□□□ -0.46
COPS2-206ENST00000559016 KANK1Q14678 1352 aa12.16□□□□□ -0.46
COPS2-206ENST00000559016 PRDM15P57071 1507 aaPredicted RBP12.16□□□□□ -0.46
COPS2-206ENST00000559016 RICTORQ6R327 1708 aa12.15□□□□□ -0.46
COPS2-206ENST00000559016 UHRF1BP1Q6BDS2 1440 aa12.15□□□□□ -0.46
COPS2-206ENST00000559016 RNF17Q9BXT8 1623 aaKnown RBP12.15□□□□□ -0.47
COPS2-206ENST00000559016 A2MP01023 1474 aa12.14□□□□□ -0.47
COPS2-206ENST00000559016 CCDC144AA2RUR9 1427 aa12.13□□□□□ -0.47
COPS2-206ENST00000559016 STAG3Q9UJ98 1225 aa12.13□□□□□ -0.47
COPS2-206ENST00000559016 E9PCH4 1651 aa12.13□□□□□ -0.47
COPS2-206ENST00000559016 LMTK2Q8IWU2 1503 aa12.12□□□□□ -0.47
COPS2-206ENST00000559016 NEURL4Q96JN8 1562 aa12.12□□□□□ -0.47
COPS2-206ENST00000559016 SPHKAPQ2M3C7 1700 aa12.11□□□□□ -0.47
COPS2-206ENST00000559016 STAC3Q96MF2 364 aa12.11□□□□□ -0.47
COPS2-206ENST00000559016 POLR1AO95602 1720 aaPredicted RBP12.11□□□□□ -0.47
COPS2-206ENST00000559016 MROH1Q8NDA8 1641 aa12.11□□□□□ -0.47
COPS2-206ENST00000559016 PLA2R1Q13018 1463 aa12.1□□□□□ -0.47
COPS2-206ENST00000559016 EIF4G2P78344 907 aaKnown RBP eCLIP12.1□□□□□ -0.47
COPS2-206ENST00000559016 MYT1LQ9UL68 1186 aa12.1□□□□□ -0.47
COPS2-206ENST00000559016 TRPM2O94759 1503 aa12.1□□□□□ -0.47
COPS2-206ENST00000559016 ZMYM4Q5VZL5 1548 aa12.1□□□□□ -0.47
COPS2-206ENST00000559016 PTPRTO14522 1441 aa12.1□□□□□ -0.47
COPS2-206ENST00000559016 CEP152O94986 1710 aa12.09□□□□□ -0.47
COPS2-206ENST00000559016 ABCA6Q8N139 1617 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms