RNA–Protein interactions for RNA: ENST00000558933.5

IDH3A-210, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 3

Gene IDH3A, Length 878 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-210ENST00000558933 NCOA1Q15788 1441 aa21.53■■□□□ 1.04
IDH3A-210ENST00000558933 ZC3H13Q5T200 1668 aaKnown RBP21.53■■□□□ 1.04
IDH3A-210ENST00000558933 CAMSAP1Q5T5Y3 1602 aa21.52■■□□□ 1.04
IDH3A-210ENST00000558933 KIF3BO15066 747 aa21.52■■□□□ 1.04
IDH3A-210ENST00000558933 KANK4Q5T7N3 995 aaPredicted RBP21.52■■□□□ 1.04
IDH3A-210ENST00000558933 CROCC2H7BZ55 1655 aa21.52■■□□□ 1.04
IDH3A-210ENST00000558933 RNF17Q9BXT8 1623 aaKnown RBP21.51■■□□□ 1.03
IDH3A-210ENST00000558933 PTPN23Q9H3S7 1636 aa21.5■■□□□ 1.03
IDH3A-210ENST00000558933 PZPP20742 1482 aa21.48■■□□□ 1.03
IDH3A-210ENST00000558933 PLA2R1Q13018 1463 aa21.48■■□□□ 1.03
IDH3A-210ENST00000558933 SHANK2Q9UPX8 1470 aa21.48■■□□□ 1.03
IDH3A-210ENST00000558933 CERKQ8TCT0 537 aa21.47■■□□□ 1.03
IDH3A-210ENST00000558933 DUOX2Q9NRD8 1548 aa21.46■■□□□ 1.03
IDH3A-210ENST00000558933 WASHC2CQ9Y4E1 1318 aa21.46■■□□□ 1.03
IDH3A-210ENST00000558933 A2ML1A8K2U0 1454 aa21.45■■□□□ 1.02
IDH3A-210ENST00000558933 DNMT1P26358 1616 aaKnown RBP21.44■■□□□ 1.02
IDH3A-210ENST00000558933 FGD6Q6ZV73 1430 aa21.42■■□□□ 1.02
IDH3A-210ENST00000558933 TNRQ92752 1358 aa21.42■■□□□ 1.02
IDH3A-210ENST00000558933 POLR1AO95602 1720 aaPredicted RBP21.41■■□□□ 1.02
IDH3A-210ENST00000558933 PKD2Q13563 968 aa21.4■■□□□ 1.02
IDH3A-210ENST00000558933 ABCC3O15438 1527 aa21.39■■□□□ 1.02
IDH3A-210ENST00000558933 TCOF1Q13428 1488 aaKnown RBP21.39■■□□□ 1.02
IDH3A-210ENST00000558933 NLRP1Q9C000 1473 aa21.39■■□□□ 1.01
IDH3A-210ENST00000558933 ERBINQ96RT1 1412 aa21.38■■□□□ 1.01
IDH3A-210ENST00000558933 CEP152O94986 1710 aa21.38■■□□□ 1.01
IDH3A-210ENST00000558933 DAPK1P53355 1430 aa21.38■■□□□ 1.01
IDH3A-210ENST00000558933 KIF15Q9NS87 1388 aa21.37■■□□□ 1.01
IDH3A-210ENST00000558933 IQSEC2Q5JU85 1478 aa21.37■■□□□ 1.01
IDH3A-210ENST00000558933 MROH1Q8NDA8 1641 aa21.37■■□□□ 1.01
IDH3A-210ENST00000558933 PRDM15P57071 1507 aaPredicted RBP21.36■■□□□ 1.01
IDH3A-210ENST00000558933 ABCC5O15440 1437 aa21.36■■□□□ 1.01
IDH3A-210ENST00000558933 SPATA31D1Q6ZQQ2 1576 aa21.33■■□□□ 1.01
IDH3A-210ENST00000558933 DEPDC5O75140 1603 aa21.33■■□□□ 1
IDH3A-210ENST00000558933 LTBP4Q8N2S1 1624 aa21.33■■□□□ 1
IDH3A-210ENST00000558933 UGGT1Q9NYU2 1555 aa21.32■■□□□ 1
IDH3A-210ENST00000558933 ANKRD30AQ9BXX3 1397 aa21.32■■□□□ 1
IDH3A-210ENST00000558933 NCKAP5LQ9HCH0 1330 aa21.31■■□□□ 1
IDH3A-210ENST00000558933 FBXO31Q5XUX0 539 aaPredicted RBP21.3■■□□□ 1
IDH3A-210ENST00000558933 ERVK-7P63135 1459 aa21.29■■□□□ 1
IDH3A-210ENST00000558933 KANK1Q14678 1352 aa21.29■■□□□ 1
IDH3A-210ENST00000558933 THEMISQ8N1K5 641 aaPredicted RBP21.27■■□□□ 1
IDH3A-210ENST00000558933 RRP7BPQ9NSQ0 103 aa21.26■□□□□ 0.99
IDH3A-210ENST00000558933 NEURL4Q96JN8 1562 aa21.25■□□□□ 0.99
IDH3A-210ENST00000558933 ADGRL2O95490 1459 aa21.25■□□□□ 0.99
IDH3A-210ENST00000558933 ARHGAP31Q2M1Z3 1444 aa21.24■□□□□ 0.99
IDH3A-210ENST00000558933 CFAP65Q6ZU64 1925 aaKnown RBP21.23■□□□□ 0.99
IDH3A-210ENST00000558933 FAM50AQ14320 339 aaKnown RBP21.22■□□□□ 0.99
IDH3A-210ENST00000558933 ANKLE2Q86XL3 938 aa21.22■□□□□ 0.99
IDH3A-210ENST00000558933 ZNF335Q9H4Z2 1342 aaPredicted RBP21.22■□□□□ 0.99
IDH3A-210ENST00000558933 UBR1Q8IWV7 1749 aa21.21■□□□□ 0.99
IDH3A-210ENST00000558933 IQGAP1P46940 1657 aa21.21■□□□□ 0.99
IDH3A-210ENST00000558933 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.21■□□□□ 0.99
IDH3A-210ENST00000558933 CPS1P31327 1500 aa21.19■□□□□ 0.98
IDH3A-210ENST00000558933 LMTK2Q8IWU2 1503 aa21.19■□□□□ 0.98
IDH3A-210ENST00000558933 CHIC2Q9UKJ5 165 aa21.19■□□□□ 0.98
IDH3A-210ENST00000558933 MED14O60244 1454 aa21.19■□□□□ 0.98
IDH3A-210ENST00000558933 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.18■□□□□ 0.987e-8■■■■□ 25
IDH3A-210ENST00000558933 NPHP4O75161 1426 aaPredicted RBP21.17■□□□□ 0.98
IDH3A-210ENST00000558933 VWDEQ8N2E2 1590 aa21.17■□□□□ 0.98
IDH3A-210ENST00000558933 KDM5AP29375 1690 aaKnown RBP21.15■□□□□ 0.98
IDH3A-210ENST00000558933 EFCAB6Q5THR3 1501 aa21.15■□□□□ 0.98
IDH3A-210ENST00000558933 ANKRD50Q9ULJ7 1429 aa21.13■□□□□ 0.97
IDH3A-210ENST00000558933 PIK3C2BO00750 1634 aa21.12■□□□□ 0.97
IDH3A-210ENST00000558933 SCAF11Q99590 1463 aaKnown RBP21.11■□□□□ 0.97
IDH3A-210ENST00000558933 SYNMO15061 1565 aa21.1■□□□□ 0.97
IDH3A-210ENST00000558933 SLIT1O75093 1534 aa21.1■□□□□ 0.97
IDH3A-210ENST00000558933 TET3O43151 1660 aa21.09■□□□□ 0.97
IDH3A-210ENST00000558933 GCC2Q8IWJ2 1684 aa21.09■□□□□ 0.97
IDH3A-210ENST00000558933 RPRD2Q5VT52 1461 aaKnown RBP21.09■□□□□ 0.97
IDH3A-210ENST00000558933 UNC13BO14795 1591 aa21.09■□□□□ 0.97
IDH3A-210ENST00000558933 UBAP1LF5GYI3 381 aa21.08■□□□□ 0.97
IDH3A-210ENST00000558933 STAG3Q9UJ98 1225 aa21.08■□□□□ 0.97
IDH3A-210ENST00000558933 ARHGAP23Q9P227 1491 aa21.07■□□□□ 0.96
IDH3A-210ENST00000558933 ROCK1Q13464 1354 aa21.07■□□□□ 0.96
IDH3A-210ENST00000558933 EID1Q9Y6B2 187 aa21.06■□□□□ 0.96
IDH3A-210ENST00000558933 ADGRB3O60242 1522 aa21.05■□□□□ 0.96
IDH3A-210ENST00000558933 NOS1P29475 1434 aa21.03■□□□□ 0.96
IDH3A-210ENST00000558933 TMEM2Q9UHN6 1383 aa21.01■□□□□ 0.95
IDH3A-210ENST00000558933 IQGAP3Q86VI3 1631 aa21■□□□□ 0.95
IDH3A-210ENST00000558933 TOM1O60784 492 aa21■□□□□ 0.95
IDH3A-210ENST00000558933 TXNDC2Q86VQ3 553 aa21■□□□□ 0.95
IDH3A-210ENST00000558933 SLC52A1Q9NWF4 448 aa20.99■□□□□ 0.95
IDH3A-210ENST00000558933 STRCP1A6NGW2 1772 aa20.97■□□□□ 0.95
IDH3A-210ENST00000558933 SCAF1Q9H7N4 1312 aaKnown RBP20.95■□□□□ 0.94
IDH3A-210ENST00000558933 E9PCH4 1651 aa20.95■□□□□ 0.94
IDH3A-210ENST00000558933 IDI1Q13907 227 aa20.94■□□□□ 0.94
IDH3A-210ENST00000558933 DISP3Q9P2K9 1392 aa20.94■□□□□ 0.94
IDH3A-210ENST00000558933 LRRC7Q96NW7 1537 aa20.94■□□□□ 0.94
IDH3A-210ENST00000558933 LTKP29376 864 aa20.93■□□□□ 0.94
IDH3A-210ENST00000558933 ITGAEP38570 1179 aa20.93■□□□□ 0.94
IDH3A-210ENST00000558933 MYO5BQ9ULV0 1848 aa20.92■□□□□ 0.94
IDH3A-210ENST00000558933 TMEM131LA2VDJ0 1609 aa20.89■□□□□ 0.94
IDH3A-210ENST00000558933 RRBP1Q9P2E9 1410 aaKnown RBP20.89■□□□□ 0.94
IDH3A-210ENST00000558933 HDGFP51858 240 aaKnown RBP20.89■□□□□ 0.93
IDH3A-210ENST00000558933 PIP4K2BP78356 416 aa20.89■□□□□ 0.93
IDH3A-210ENST00000558933 NUP155O75694 1391 aa20.88■□□□□ 0.93
IDH3A-210ENST00000558933 PPARGC1BQ86YN6 1023 aaKnown RBP20.88■□□□□ 0.93
IDH3A-210ENST00000558933 SPHKAPQ2M3C7 1700 aa20.86■□□□□ 0.93
IDH3A-210ENST00000558933 PPP1R15AO75807 674 aaPredicted RBP20.85■□□□□ 0.93
IDH3A-210ENST00000558933 NKTRP30414 1462 aaKnown RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms