RNA–Protein interactions for RNA: ENST00000558216.1

CHRNB4-203, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 2

Gene CHRNB4, Length 578 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-203ENST00000558216 MBD5Q9P267 1494 aa20.74■□□□□ 0.91
CHRNB4-203ENST00000558216 MYOM3Q5VTT5 1437 aa20.73■□□□□ 0.91
CHRNB4-203ENST00000558216 UBAP1LF5GYI3 381 aa20.73■□□□□ 0.91
CHRNB4-203ENST00000558216 CAMSAP2Q08AD1 1489 aa20.73■□□□□ 0.91
CHRNB4-203ENST00000558216 PTPRKQ15262 1439 aa20.71■□□□□ 0.91
CHRNB4-203ENST00000558216 RTEL1-TNFRSF6BF6WH68 1400 aa20.7■□□□□ 0.9
CHRNB4-203ENST00000558216 CCDC141Q6ZP82 1450 aa20.69■□□□□ 0.9
CHRNB4-203ENST00000558216 A2MP01023 1474 aa20.68■□□□□ 0.9
CHRNB4-203ENST00000558216 POLR1AO95602 1720 aaPredicted RBP20.67■□□□□ 0.9
CHRNB4-203ENST00000558216 TSPY4P0CV99 314 aa20.67■□□□□ 0.9
CHRNB4-203ENST00000558216 TSPY10P0CW01 314 aa20.67■□□□□ 0.9
CHRNB4-203ENST00000558216 ADGBQ8N7X0 1667 aa20.67■□□□□ 0.9
CHRNB4-203ENST00000558216 PKD2Q13563 968 aa20.66■□□□□ 0.9
CHRNB4-203ENST00000558216 MED1Q15648 1581 aaPredicted RBP20.66■□□□□ 0.9
CHRNB4-203ENST00000558216 DNMT1P26358 1616 aaKnown RBP20.65■□□□□ 0.9
CHRNB4-203ENST00000558216 ARHGEF5Q12774 1597 aa20.65■□□□□ 0.9
CHRNB4-203ENST00000558216 NEURL4Q96JN8 1562 aa20.62■□□□□ 0.89
CHRNB4-203ENST00000558216 PPP6R1Q9UPN7 881 aa20.61■□□□□ 0.89
CHRNB4-203ENST00000558216 A2ML1A8K2U0 1454 aa20.61■□□□□ 0.89
CHRNB4-203ENST00000558216 FGD6Q6ZV73 1430 aa20.6■□□□□ 0.89
CHRNB4-203ENST00000558216 GGT6Q6P531 493 aa20.59■□□□□ 0.89
CHRNB4-203ENST00000558216 DHX29Q7Z478 1369 aaKnown RBP20.58■□□□□ 0.88
CHRNB4-203ENST00000558216 HSPA1LP34931 641 aa20.57■□□□□ 0.88
CHRNB4-203ENST00000558216 CPS1P31327 1500 aa20.56■□□□□ 0.88
CHRNB4-203ENST00000558216 SCAF1Q9H7N4 1312 aaKnown RBP20.54■□□□□ 0.88
CHRNB4-203ENST00000558216 PTPN23Q9H3S7 1636 aa20.54■□□□□ 0.88
CHRNB4-203ENST00000558216 PIP4K2BP78356 416 aa20.53■□□□□ 0.88
CHRNB4-203ENST00000558216 MAST1Q9Y2H9 1570 aa20.53■□□□□ 0.88
CHRNB4-203ENST00000558216 ALKQ9UM73 1620 aa20.53■□□□□ 0.88
CHRNB4-203ENST00000558216 SHANK2Q9UPX8 1470 aa20.52■□□□□ 0.88
CHRNB4-203ENST00000558216 VWDEQ8N2E2 1590 aa20.51■□□□□ 0.87
CHRNB4-203ENST00000558216 ABCC5O15440 1437 aa20.5■□□□□ 0.87
CHRNB4-203ENST00000558216 TNRQ92752 1358 aa20.48■□□□□ 0.87
CHRNB4-203ENST00000558216 DAPK1P53355 1430 aa20.48■□□□□ 0.87
CHRNB4-203ENST00000558216 PZPP20742 1482 aa20.48■□□□□ 0.87
CHRNB4-203ENST00000558216 KDM5DQ9BY66 1539 aa20.48■□□□□ 0.87
CHRNB4-203ENST00000558216 KIF3BO15066 747 aa20.47■□□□□ 0.87
CHRNB4-203ENST00000558216 FAM50AQ14320 339 aaKnown RBP20.47■□□□□ 0.87
CHRNB4-203ENST00000558216 STRCP1A6NGW2 1772 aa20.46■□□□□ 0.87
CHRNB4-203ENST00000558216 TOM1O60784 492 aa20.46■□□□□ 0.87
CHRNB4-203ENST00000558216 FBXO31Q5XUX0 539 aaPredicted RBP20.46■□□□□ 0.87
CHRNB4-203ENST00000558216 DEPDC5O75140 1603 aa20.45■□□□□ 0.86
CHRNB4-203ENST00000558216 FAM135AQ9P2D6 1515 aa20.44■□□□□ 0.86
CHRNB4-203ENST00000558216 IQGAP1P46940 1657 aa20.44■□□□□ 0.86
CHRNB4-203ENST00000558216 ANKRD30AQ9BXX3 1397 aa20.43■□□□□ 0.86
CHRNB4-203ENST00000558216 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.43■□□□□ 0.86
CHRNB4-203ENST00000558216 KIF15Q9NS87 1388 aa20.42■□□□□ 0.86
CHRNB4-203ENST00000558216 DUOX2Q9NRD8 1548 aa20.42■□□□□ 0.86
CHRNB4-203ENST00000558216 MED14O60244 1454 aa20.41■□□□□ 0.86
CHRNB4-203ENST00000558216 UGGT1Q9NYU2 1555 aa20.41■□□□□ 0.86
CHRNB4-203ENST00000558216 CROCC2H7BZ55 1655 aa20.4■□□□□ 0.86
CHRNB4-203ENST00000558216 NLRP1Q9C000 1473 aa20.39■□□□□ 0.85
CHRNB4-203ENST00000558216 NPHP4O75161 1426 aaPredicted RBP20.39■□□□□ 0.85
CHRNB4-203ENST00000558216 PPARGC1BQ86YN6 1023 aaKnown RBP20.39■□□□□ 0.85
CHRNB4-203ENST00000558216 RRP7BPQ9NSQ0 103 aa20.39■□□□□ 0.85
CHRNB4-203ENST00000558216 RNF17Q9BXT8 1623 aaKnown RBP20.38■□□□□ 0.85
CHRNB4-203ENST00000558216 ERBINQ96RT1 1412 aa20.38■□□□□ 0.85
CHRNB4-203ENST00000558216 WASHC2CQ9Y4E1 1318 aa20.37■□□□□ 0.85
CHRNB4-203ENST00000558216 ANKLE2Q86XL3 938 aa20.37■□□□□ 0.85
CHRNB4-203ENST00000558216 CHIC2Q9UKJ5 165 aa20.37■□□□□ 0.85
CHRNB4-203ENST00000558216 EIF2AK4Q9P2K8 1649 aaKnown RBP20.37■□□□□ 0.85
CHRNB4-203ENST00000558216 SYNMO15061 1565 aa20.37■□□□□ 0.85
CHRNB4-203ENST00000558216 LRRC7Q96NW7 1537 aa20.35■□□□□ 0.85
CHRNB4-203ENST00000558216 ADGRL2O95490 1459 aa20.35■□□□□ 0.85
CHRNB4-203ENST00000558216 ZC3H13Q5T200 1668 aaKnown RBP20.35■□□□□ 0.85
CHRNB4-203ENST00000558216 THEMISQ8N1K5 641 aaPredicted RBP20.33■□□□□ 0.85
CHRNB4-203ENST00000558216 CFAP65Q6ZU64 1925 aaKnown RBP20.31■□□□□ 0.84
CHRNB4-203ENST00000558216 XIRP1Q702N8 1843 aaKnown RBP20.31■□□□□ 0.84
CHRNB4-203ENST00000558216 MSH5O43196 834 aa20.3■□□□□ 0.84
CHRNB4-203ENST00000558216 ABCC3O15438 1527 aa20.3■□□□□ 0.84
CHRNB4-203ENST00000558216 UBR1Q8IWV7 1749 aa20.3■□□□□ 0.84
CHRNB4-203ENST00000558216 ROCK1Q13464 1354 aa20.29■□□□□ 0.84
CHRNB4-203ENST00000558216 CEP152O94986 1710 aa20.28■□□□□ 0.84
CHRNB4-203ENST00000558216 KANK1Q14678 1352 aa20.28■□□□□ 0.84
CHRNB4-203ENST00000558216 RRBP1Q9P2E9 1410 aaKnown RBP20.27■□□□□ 0.84
CHRNB4-203ENST00000558216 MROH1Q8NDA8 1641 aa20.26■□□□□ 0.83
CHRNB4-203ENST00000558216 ERVK-7P63135 1459 aa20.25■□□□□ 0.83
CHRNB4-203ENST00000558216 ANKRD50Q9ULJ7 1429 aa20.25■□□□□ 0.83
CHRNB4-203ENST00000558216 PRDM15P57071 1507 aaPredicted RBP20.24■□□□□ 0.83
CHRNB4-203ENST00000558216 ITGAEP38570 1179 aa20.23■□□□□ 0.83
CHRNB4-203ENST00000558216 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.22■□□□□ 0.83
CHRNB4-203ENST00000558216 RGS17Q9UGC6 210 aaPredicted RBP20.22■□□□□ 0.83
CHRNB4-203ENST00000558216 SCAF11Q99590 1463 aaKnown RBP20.2■□□□□ 0.82
CHRNB4-203ENST00000558216 ARHGAP31Q2M1Z3 1444 aa20.19■□□□□ 0.82
CHRNB4-203ENST00000558216 ARHGAP23Q9P227 1491 aa20.17■□□□□ 0.82
CHRNB4-203ENST00000558216 SLIT1O75093 1534 aa20.17■□□□□ 0.82
CHRNB4-203ENST00000558216 LMTK2Q8IWU2 1503 aa20.16■□□□□ 0.82
CHRNB4-203ENST00000558216 LTKP29376 864 aa20.13■□□□□ 0.81
CHRNB4-203ENST00000558216 PIK3C2BO00750 1634 aa20.13■□□□□ 0.81
CHRNB4-203ENST00000558216 SETD1AO15047 1707 aaKnown RBP20.11■□□□□ 0.81
CHRNB4-203ENST00000558216 ROBO1Q9Y6N7 1651 aa20.1■□□□□ 0.81
CHRNB4-203ENST00000558216 TXNDC2Q86VQ3 553 aa20.08■□□□□ 0.81
CHRNB4-203ENST00000558216 POTEAQ6S8J7 498 aa20.07■□□□□ 0.8
CHRNB4-203ENST00000558216 FAM135BQ49AJ0 1406 aa20.07■□□□□ 0.8
CHRNB4-203ENST00000558216 UNC13BO14795 1591 aa20.07■□□□□ 0.8
CHRNB4-203ENST00000558216 EFCAB6Q5THR3 1501 aa20.07■□□□□ 0.8
CHRNB4-203ENST00000558216 RPRD2Q5VT52 1461 aaKnown RBP20.06■□□□□ 0.8
CHRNB4-203ENST00000558216 NUP155O75694 1391 aa20.06■□□□□ 0.8
CHRNB4-203ENST00000558216 KDM5AP29375 1690 aaKnown RBP20.05■□□□□ 0.8
CHRNB4-203ENST00000558216 HFM1A2PYH4 1435 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms