RNA–Protein interactions for RNA: ENST00000558196.1

SEC11A-204, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 3

Gene SEC11A, Length 540 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-204ENST00000558196 ITSN2Q9NZM3 1697 aa12.59□□□□□ -0.39
SEC11A-204ENST00000558196 CNTLNQ9NXG0 1405 aa12.59□□□□□ -0.39
SEC11A-204ENST00000558196 CDC42BPAQ5VT25 1732 aa12.59□□□□□ -0.39
SEC11A-204ENST00000558196 CCNB3Q8WWL7 1395 aa12.58□□□□□ -0.4
SEC11A-204ENST00000558196 PREX1Q8TCU6 1659 aa12.58□□□□□ -0.4
SEC11A-204ENST00000558196 PLEKHH2Q8IVE3 1493 aa12.58□□□□□ -0.4
SEC11A-204ENST00000558196 ZMYM3Q14202 1370 aa12.57□□□□□ -0.4
SEC11A-204ENST00000558196 MTUS2Q5JR59 1369 aa12.56□□□□□ -0.4
SEC11A-204ENST00000558196 PTPRTO14522 1441 aa12.56□□□□□ -0.4
SEC11A-204ENST00000558196 SYCP2Q9BX26 1530 aa12.56□□□□□ -0.4
SEC11A-204ENST00000558196 ZNF644Q9H582 1327 aaPredicted RBP12.56□□□□□ -0.4
SEC11A-204ENST00000558196 STRCQ7RTU9 1775 aa12.55□□□□□ -0.4
SEC11A-204ENST00000558196 NPATQ14207 1427 aa12.54□□□□□ -0.4
SEC11A-204ENST00000558196 C3P01024 1663 aa12.54□□□□□ -0.4
SEC11A-204ENST00000558196 A2MP01023 1474 aa12.53□□□□□ -0.4
SEC11A-204ENST00000558196 MBD5Q9P267 1494 aa12.53□□□□□ -0.4
SEC11A-204ENST00000558196 CEP162Q5TB80 1403 aa12.53□□□□□ -0.4
SEC11A-204ENST00000558196 ATP7AQ04656 1500 aa12.52□□□□□ -0.4
SEC11A-204ENST00000558196 RTEL1-TNFRSF6BF6WH68 1400 aa12.52□□□□□ -0.41
SEC11A-204ENST00000558196 RSPH4AQ5TD94 716 aa12.51□□□□□ -0.41
SEC11A-204ENST00000558196 GGT6Q6P531 493 aa12.51□□□□□ -0.41
SEC11A-204ENST00000558196 NCOA1Q15788 1441 aa12.51□□□□□ -0.41
SEC11A-204ENST00000558196 PLXNC1O60486 1568 aa12.51□□□□□ -0.41
SEC11A-204ENST00000558196 PITPNM1O00562 1244 aa12.5□□□□□ -0.41
SEC11A-204ENST00000558196 CLEC11AQ9Y240 323 aa12.5□□□□□ -0.41
SEC11A-204ENST00000558196 DHX29Q7Z478 1369 aaKnown RBP12.5□□□□□ -0.41
SEC11A-204ENST00000558196 INO80Q9ULG1 1556 aaPredicted RBP12.49□□□□□ -0.41
SEC11A-204ENST00000558196 PTPRKQ15262 1439 aa12.49□□□□□ -0.41
SEC11A-204ENST00000558196 SPDYE1Q8NFV5 336 aaPredicted RBP12.48□□□□□ -0.41
SEC11A-204ENST00000558196 MROH2AA6NES4 1674 aa12.48□□□□□ -0.41
SEC11A-204ENST00000558196 TIAM1Q13009 1591 aa12.47□□□□□ -0.41
SEC11A-204ENST00000558196 EHBP1L1Q8N3D4 1523 aa12.47□□□□□ -0.41
SEC11A-204ENST00000558196 NCKAP5LQ9HCH0 1330 aa12.46□□□□□ -0.41
SEC11A-204ENST00000558196 PKD2Q13563 968 aa12.46□□□□□ -0.41
SEC11A-204ENST00000558196 LTBP4Q8N2S1 1624 aa12.46□□□□□ -0.41
SEC11A-204ENST00000558196 SUPT6HQ7KZ85 1726 aaKnown RBP12.45□□□□□ -0.42
SEC11A-204ENST00000558196 PLA2R1Q13018 1463 aa12.44□□□□□ -0.42
SEC11A-204ENST00000558196 NCOA2Q15596 1464 aa12.44□□□□□ -0.42
SEC11A-204ENST00000558196 CAMSAP1Q5T5Y3 1602 aa12.44□□□□□ -0.42
SEC11A-204ENST00000558196 IQSEC2Q5JU85 1478 aa12.43□□□□□ -0.42
SEC11A-204ENST00000558196 LOC105371045A0A1W2PR82 267 aa12.43□□□□□ -0.42
SEC11A-204ENST00000558196 KIF3BO15066 747 aa12.43□□□□□ -0.42
SEC11A-204ENST00000558196 TCOF1Q13428 1488 aaKnown RBP12.42□□□□□ -0.42
SEC11A-204ENST00000558196 TSPY4P0CV99 314 aa12.42□□□□□ -0.42
SEC11A-204ENST00000558196 TSPY10P0CW01 314 aa12.42□□□□□ -0.42
SEC11A-204ENST00000558196 CLTCQ00610 1675 aaKnown RBP12.42□□□□□ -0.42
SEC11A-204ENST00000558196 ADGBQ8N7X0 1667 aa12.42□□□□□ -0.42
SEC11A-204ENST00000558196 CCDC141Q6ZP82 1450 aa12.41□□□□□ -0.42
SEC11A-204ENST00000558196 FBXO31Q5XUX0 539 aaPredicted RBP12.41□□□□□ -0.42
SEC11A-204ENST00000558196 FBXO3Q9UK99 471 aa12.4□□□□□ -0.42
SEC11A-204ENST00000558196 A2ML1A8K2U0 1454 aa12.4□□□□□ -0.43
SEC11A-204ENST00000558196 CAMSAP2Q08AD1 1489 aa12.4□□□□□ -0.43
SEC11A-204ENST00000558196 ZNF335Q9H4Z2 1342 aaPredicted RBP12.39□□□□□ -0.43
SEC11A-204ENST00000558196 WASHC2CQ9Y4E1 1318 aa12.39□□□□□ -0.43
SEC11A-204ENST00000558196 KANK4Q5T7N3 995 aaPredicted RBP12.39□□□□□ -0.43
SEC11A-204ENST00000558196 STAG3Q9UJ98 1225 aa12.39□□□□□ -0.43
SEC11A-204ENST00000558196 LRRC9Q6ZRR7 1453 aa12.39□□□□□ -0.43
SEC11A-204ENST00000558196 CEP170BQ9Y4F5 1589 aaPredicted RBP12.39□□□□□ -0.43
SEC11A-204ENST00000558196 VPS8Q8N3P4 1428 aa12.38□□□□□ -0.43
SEC11A-204ENST00000558196 FAM135AQ9P2D6 1515 aa12.37□□□□□ -0.43
SEC11A-204ENST00000558196 TNRQ92752 1358 aa12.37□□□□□ -0.43
SEC11A-204ENST00000558196 PZPP20742 1482 aa12.37□□□□□ -0.43
SEC11A-204ENST00000558196 ARHGEF5Q12774 1597 aa12.37□□□□□ -0.43
SEC11A-204ENST00000558196 ZNF142P52746 1687 aaPredicted RBP12.37□□□□□ -0.43
SEC11A-204ENST00000558196 MYO3AQ8NEV4 1616 aa12.37□□□□□ -0.43
SEC11A-204ENST00000558196 MIA2Q96PC5 1412 aa12.37□□□□□ -0.43
SEC11A-204ENST00000558196 THEMISQ8N1K5 641 aaPredicted RBP12.36□□□□□ -0.43
SEC11A-204ENST00000558196 MAP3K1Q13233 1512 aa12.36□□□□□ -0.43
SEC11A-204ENST00000558196 DNMT1P26358 1616 aaKnown RBP12.35□□□□□ -0.43
SEC11A-204ENST00000558196 KDM5DQ9BY66 1539 aa12.34□□□□□ -0.43
SEC11A-204ENST00000558196 PRR29P0C7W0 189 aa12.34□□□□□ -0.43
SEC11A-204ENST00000558196 CHRDL2Q6WN34 429 aa12.34□□□□□ -0.43
SEC11A-204ENST00000558196 ANKLE2Q86XL3 938 aa12.34□□□□□ -0.43
SEC11A-204ENST00000558196 DISP3Q9P2K9 1392 aa12.33□□□□□ -0.44
SEC11A-204ENST00000558196 UBAP1LF5GYI3 381 aa12.33□□□□□ -0.44
SEC11A-204ENST00000558196 ILDR2Q71H61 639 aa12.33□□□□□ -0.44
SEC11A-204ENST00000558196 VASPP50552 380 aaPredicted RBP12.32□□□□□ -0.44
SEC11A-204ENST00000558196 NLRP1Q9C000 1473 aa12.32□□□□□ -0.44
SEC11A-204ENST00000558196 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.31□□□□□ -0.44
SEC11A-204ENST00000558196 MYOM3Q5VTT5 1437 aa12.31□□□□□ -0.44
SEC11A-204ENST00000558196 MAST1Q9Y2H9 1570 aa12.3□□□□□ -0.44
SEC11A-204ENST00000558196 MED14O60244 1454 aa12.29□□□□□ -0.44
SEC11A-204ENST00000558196 NEURL4Q96JN8 1562 aa12.28□□□□□ -0.44
SEC11A-204ENST00000558196 SHANK2Q9UPX8 1470 aa12.27□□□□□ -0.44
SEC11A-204ENST00000558196 ABCC3O15438 1527 aa12.27□□□□□ -0.44
SEC11A-204ENST00000558196 UGGT1Q9NYU2 1555 aa12.27□□□□□ -0.44
SEC11A-204ENST00000558196 RNF17Q9BXT8 1623 aaKnown RBP12.27□□□□□ -0.44
SEC11A-204ENST00000558196 SOCS7O14512 581 aa12.27□□□□□ -0.45
SEC11A-204ENST00000558196 TOM1O60784 492 aa12.26□□□□□ -0.45
SEC11A-204ENST00000558196 ABCC5O15440 1437 aa12.26□□□□□ -0.45
SEC11A-204ENST00000558196 CPS1P31327 1500 aa12.26□□□□□ -0.45
SEC11A-204ENST00000558196 SPATA31D1Q6ZQQ2 1576 aa12.26□□□□□ -0.45
SEC11A-204ENST00000558196 CHADLQ6NUI6 762 aa12.25□□□□□ -0.45
SEC11A-204ENST00000558196 NPHP4O75161 1426 aaPredicted RBP12.25□□□□□ -0.45
SEC11A-204ENST00000558196 ERVK-7P63135 1459 aa12.24□□□□□ -0.45
SEC11A-204ENST00000558196 ARHGAP31Q2M1Z3 1444 aa12.24□□□□□ -0.45
SEC11A-204ENST00000558196 MIER1Q8N108 512 aa12.24□□□□□ -0.45
SEC11A-204ENST00000558196 DUOX2Q9NRD8 1548 aa12.24□□□□□ -0.45
SEC11A-204ENST00000558196 CREBZFQ9NS37 354 aa12.24□□□□□ -0.45
SEC11A-204ENST00000558196 KIF15Q9NS87 1388 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms