RNA–Protein interactions for RNA: ENST00000557849.1

INO80-203, Transcript of INO80 complex subunit, humanhuman

TSL 5

Gene INO80, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80-203ENST00000557849 POLR1AO95602 1720 aaPredicted RBP13.96□□□□□ -0.17
INO80-203ENST00000557849 CCDC141Q6ZP82 1450 aa13.96□□□□□ -0.17
INO80-203ENST00000557849 FBXO31Q5XUX0 539 aaPredicted RBP13.96□□□□□ -0.17
INO80-203ENST00000557849 PZPP20742 1482 aa13.94□□□□□ -0.18
INO80-203ENST00000557849 KDM5DQ9BY66 1539 aa13.94□□□□□ -0.18
INO80-203ENST00000557849 ARHGEF5Q12774 1597 aa13.93□□□□□ -0.18
INO80-203ENST00000557849 KIF3BO15066 747 aa13.93□□□□□ -0.18
INO80-203ENST00000557849 TNRQ92752 1358 aa13.92□□□□□ -0.18
INO80-203ENST00000557849 FAM135AQ9P2D6 1515 aa13.91□□□□□ -0.18
INO80-203ENST00000557849 SOCS7O14512 581 aa13.91□□□□□ -0.18
INO80-203ENST00000557849 UBAP1LF5GYI3 381 aa13.9□□□□□ -0.18
INO80-203ENST00000557849 RNF17Q9BXT8 1623 aaKnown RBP13.9□□□□□ -0.19
INO80-203ENST00000557849 VWDEQ8N2E2 1590 aa13.89□□□□□ -0.19
INO80-203ENST00000557849 MROH1Q8NDA8 1641 aa13.89□□□□□ -0.19
INO80-203ENST00000557849 ALKQ9UM73 1620 aa13.89□□□□□ -0.19
INO80-203ENST00000557849 LRRC9Q6ZRR7 1453 aa13.88□□□□□ -0.19
INO80-203ENST00000557849 STRCP1A6NGW2 1772 aa13.88□□□□□ -0.19
INO80-203ENST00000557849 MIA2Q96PC5 1412 aa13.88□□□□□ -0.19
INO80-203ENST00000557849 MAST1Q9Y2H9 1570 aa13.88□□□□□ -0.19
INO80-203ENST00000557849 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.87□□□□□ -0.19
INO80-203ENST00000557849 ABCC3O15438 1527 aa13.87□□□□□ -0.19
INO80-203ENST00000557849 WASHC2CQ9Y4E1 1318 aa13.87□□□□□ -0.19
INO80-203ENST00000557849 SHANK2Q9UPX8 1470 aa13.87□□□□□ -0.19
INO80-203ENST00000557849 CFAP65Q6ZU64 1925 aaKnown RBP13.86□□□□□ -0.19
INO80-203ENST00000557849 KANK4Q5T7N3 995 aaPredicted RBP13.86□□□□□ -0.19
INO80-203ENST00000557849 RSPH4AQ5TD94 716 aa13.86□□□□□ -0.19
INO80-203ENST00000557849 DEPDC5O75140 1603 aa13.86□□□□□ -0.19
INO80-203ENST00000557849 UGGT1Q9NYU2 1555 aa13.85□□□□□ -0.19
INO80-203ENST00000557849 VPS8Q8N3P4 1428 aa13.85□□□□□ -0.19
INO80-203ENST00000557849 LOC105371045A0A1W2PR82 267 aa13.85□□□□□ -0.19
INO80-203ENST00000557849 MED14O60244 1454 aa13.85□□□□□ -0.19
INO80-203ENST00000557849 NLRP1Q9C000 1473 aa13.85□□□□□ -0.19
INO80-203ENST00000557849 CPS1P31327 1500 aa13.85□□□□□ -0.19
INO80-203ENST00000557849 CEP152O94986 1710 aa13.84□□□□□ -0.19
INO80-203ENST00000557849 ZC3H13Q5T200 1668 aaKnown RBP13.84□□□□□ -0.19
INO80-203ENST00000557849 EIF2AK4Q9P2K8 1649 aaKnown RBP13.83□□□□□ -0.2
INO80-203ENST00000557849 IQGAP1P46940 1657 aa13.83□□□□□ -0.2
INO80-203ENST00000557849 NPHP4O75161 1426 aaPredicted RBP13.81□□□□□ -0.2
INO80-203ENST00000557849 ERVK-7P63135 1459 aa13.81□□□□□ -0.2
INO80-203ENST00000557849 TSPY4P0CV99 314 aa13.81□□□□□ -0.2
INO80-203ENST00000557849 TSPY10P0CW01 314 aa13.81□□□□□ -0.2
INO80-203ENST00000557849 HSPA1LP34931 641 aa13.81□□□□□ -0.2
INO80-203ENST00000557849 ANKLE2Q86XL3 938 aa13.81□□□□□ -0.2
INO80-203ENST00000557849 UBR1Q8IWV7 1749 aa13.81□□□□□ -0.2
INO80-203ENST00000557849 MAP3K1Q13233 1512 aa13.8□□□□□ -0.2
INO80-203ENST00000557849 THEMISQ8N1K5 641 aaPredicted RBP13.8□□□□□ -0.2
INO80-203ENST00000557849 MYOM3Q5VTT5 1437 aa13.79□□□□□ -0.2
INO80-203ENST00000557849 MED1Q15648 1581 aaPredicted RBP13.79□□□□□ -0.2
INO80-203ENST00000557849 CROCC2H7BZ55 1655 aa13.79□□□□□ -0.2
INO80-203ENST00000557849 PIP4K2BP78356 416 aa13.78□□□□□ -0.2
INO80-203ENST00000557849 LRRC7Q96NW7 1537 aa13.77□□□□□ -0.21
INO80-203ENST00000557849 XIRP1Q702N8 1843 aaKnown RBP13.76□□□□□ -0.21
INO80-203ENST00000557849 PRDM15P57071 1507 aaPredicted RBP13.76□□□□□ -0.21
INO80-203ENST00000557849 DUOX2Q9NRD8 1548 aa13.76□□□□□ -0.21
INO80-203ENST00000557849 ABCC5O15440 1437 aa13.75□□□□□ -0.21
INO80-203ENST00000557849 ARHGAP23Q9P227 1491 aa13.74□□□□□ -0.21
INO80-203ENST00000557849 SCAF1Q9H7N4 1312 aaKnown RBP13.74□□□□□ -0.21
INO80-203ENST00000557849 TOM1O60784 492 aa13.74□□□□□ -0.21
INO80-203ENST00000557849 LTKP29376 864 aa13.74□□□□□ -0.21
INO80-203ENST00000557849 PTPN23Q9H3S7 1636 aa13.73□□□□□ -0.21
INO80-203ENST00000557849 SYNMO15061 1565 aa13.73□□□□□ -0.21
INO80-203ENST00000557849 SLIT1O75093 1534 aa13.73□□□□□ -0.21
INO80-203ENST00000557849 KIF15Q9NS87 1388 aa13.72□□□□□ -0.21
INO80-203ENST00000557849 SCAF11Q99590 1463 aaKnown RBP13.72□□□□□ -0.21
INO80-203ENST00000557849 ARHGAP31Q2M1Z3 1444 aa13.72□□□□□ -0.21
INO80-203ENST00000557849 PIK3C2BO00750 1634 aa13.72□□□□□ -0.21
INO80-203ENST00000557849 ERBINQ96RT1 1412 aa13.7□□□□□ -0.22
INO80-203ENST00000557849 RRP7BPQ9NSQ0 103 aa13.69□□□□□ -0.22
INO80-203ENST00000557849 DAPK1P53355 1430 aa13.69□□□□□ -0.22
INO80-203ENST00000557849 FGD6Q6ZV73 1430 aa13.66□□□□□ -0.22
INO80-203ENST00000557849 LMTK2Q8IWU2 1503 aa13.66□□□□□ -0.22
INO80-203ENST00000557849 TXNDC2Q86VQ3 553 aa13.66□□□□□ -0.22
INO80-203ENST00000557849 KDM5AP29375 1690 aaKnown RBP13.66□□□□□ -0.22
INO80-203ENST00000557849 SENP3Q9H4L4 574 aaPredicted RBP13.65□□□□□ -0.22
INO80-203ENST00000557849 TMEM2Q9UHN6 1383 aa13.65□□□□□ -0.22
INO80-203ENST00000557849 TET3O43151 1660 aa13.65□□□□□ -0.22
INO80-203ENST00000557849 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.64□□□□□ -0.23
INO80-203ENST00000557849 NOS1P29475 1434 aa13.63□□□□□ -0.23
INO80-203ENST00000557849 MYO5BQ9ULV0 1848 aa13.62□□□□□ -0.23
INO80-203ENST00000557849 IDI1Q13907 227 aa13.62□□□□□ -0.23
INO80-203ENST00000557849 CHIC2Q9UKJ5 165 aa13.62□□□□□ -0.23
INO80-203ENST00000557849 EFCAB6Q5THR3 1501 aa13.62□□□□□ -0.23
INO80-203ENST00000557849 RGS17Q9UGC6 210 aaPredicted RBP13.61□□□□□ -0.23
INO80-203ENST00000557849 ADGRL2O95490 1459 aa13.6□□□□□ -0.23
INO80-203ENST00000557849 ADGRB3O60242 1522 aa13.59□□□□□ -0.23
INO80-203ENST00000557849 ANKRD30AQ9BXX3 1397 aa13.58□□□□□ -0.23
INO80-203ENST00000557849 EID1Q9Y6B2 187 aa13.58□□□□□ -0.24
INO80-203ENST00000557849 NWD1Q149M9 1564 aa13.58□□□□□ -0.24
INO80-203ENST00000557849 TMEM94Q12767 1356 aa13.58□□□□□ -0.24
INO80-203ENST00000557849 KANK1Q14678 1352 aa13.58□□□□□ -0.24
INO80-203ENST00000557849 RBM33Q96EV2 1170 aaKnown RBP13.57□□□□□ -0.24
INO80-203ENST00000557849 ROBO1Q9Y6N7 1651 aa13.56□□□□□ -0.24
INO80-203ENST00000557849 FAM135BQ49AJ0 1406 aa13.56□□□□□ -0.24
INO80-203ENST00000557849 SLC26A8Q96RN1 970 aa13.56□□□□□ -0.24
INO80-203ENST00000557849 GCC2Q8IWJ2 1684 aa13.56□□□□□ -0.24
INO80-203ENST00000557849 ZFYVE9O95405 1425 aa13.56□□□□□ -0.24
INO80-203ENST00000557849 KCNA6P17658 529 aa13.55□□□□□ -0.24
INO80-203ENST00000557849 PHF23Q9BUL5 403 aaPredicted RBP13.55□□□□□ -0.24
INO80-203ENST00000557849 CHD2O14647 1828 aaKnown RBP13.55□□□□□ -0.24
INO80-203ENST00000557849 TMEM131LA2VDJ0 1609 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms