RNA–Protein interactions for RNA: ENST00000557820.5

PKNOX1-207, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 4

Gene PKNOX1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-207ENST00000557820 TSPY10P0CW01 314 aa9.82□□□□□ -0.84
PKNOX1-207ENST00000557820 PPP4R3CPQ6ZMV5 832 aa9.82□□□□□ -0.84
PKNOX1-207ENST00000557820 ESF1Q9H501 851 aaKnown RBP9.81□□□□□ -0.84
PKNOX1-207ENST00000557820 RRP7BPQ9NSQ0 103 aa9.81□□□□□ -0.84
PKNOX1-207ENST00000557820 RSPH4AQ5TD94 716 aa9.8□□□□□ -0.84
PKNOX1-207ENST00000557820 SHANK2Q9UPX8 1470 aa9.79□□□□□ -0.84
PKNOX1-207ENST00000557820 KIF15Q9NS87 1388 aa9.79□□□□□ -0.84
PKNOX1-207ENST00000557820 PTPRKQ15262 1439 aa9.79□□□□□ -0.84
PKNOX1-207ENST00000557820 ZMYM3Q14202 1370 aa9.78□□□□□ -0.84
PKNOX1-207ENST00000557820 ITGAEP38570 1179 aa9.78□□□□□ -0.84
PKNOX1-207ENST00000557820 CNTLNQ9NXG0 1405 aa9.78□□□□□ -0.84
PKNOX1-207ENST00000557820 MROH1Q8NDA8 1641 aa9.78□□□□□ -0.84
PKNOX1-207ENST00000557820 MROH2AA6NES4 1674 aa9.77□□□□□ -0.85
PKNOX1-207ENST00000557820 PREX1Q8TCU6 1659 aa9.77□□□□□ -0.85
PKNOX1-207ENST00000557820 KDM5DQ9BY66 1539 aa9.77□□□□□ -0.85
PKNOX1-207ENST00000557820 DUOX2Q9NRD8 1548 aa9.77□□□□□ -0.85
PKNOX1-207ENST00000557820 RNF17Q9BXT8 1623 aaKnown RBP9.76□□□□□ -0.85
PKNOX1-207ENST00000557820 UHRF1BP1Q6BDS2 1440 aa9.75□□□□□ -0.85
PKNOX1-207ENST00000557820 FBXO31Q5XUX0 539 aaPredicted RBP9.75□□□□□ -0.85
PKNOX1-207ENST00000557820 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.75□□□□□ -0.85
PKNOX1-207ENST00000557820 ABCC3O15438 1527 aa9.75□□□□□ -0.85
PKNOX1-207ENST00000557820 ANKRD30AQ9BXX3 1397 aa9.75□□□□□ -0.85
PKNOX1-207ENST00000557820 EIF2AK4Q9P2K8 1649 aaKnown RBP9.74□□□□□ -0.85
PKNOX1-207ENST00000557820 CEP152O94986 1710 aa9.74□□□□□ -0.85
PKNOX1-207ENST00000557820 WASHC2CQ9Y4E1 1318 aa9.74□□□□□ -0.85
PKNOX1-207ENST00000557820 MYO3AQ8NEV4 1616 aa9.74□□□□□ -0.85
PKNOX1-207ENST00000557820 NCOA1Q15788 1441 aa9.73□□□□□ -0.85
PKNOX1-207ENST00000557820 ERBINQ96RT1 1412 aa9.73□□□□□ -0.85
PKNOX1-207ENST00000557820 ADGRL2O95490 1459 aa9.73□□□□□ -0.85
PKNOX1-207ENST00000557820 NPATQ14207 1427 aa9.72□□□□□ -0.85
PKNOX1-207ENST00000557820 PZPP20742 1482 aa9.72□□□□□ -0.85
PKNOX1-207ENST00000557820 PRDM15P57071 1507 aaPredicted RBP9.72□□□□□ -0.85
PKNOX1-207ENST00000557820 CAMSAP1Q5T5Y3 1602 aa9.71□□□□□ -0.85
PKNOX1-207ENST00000557820 TNRQ92752 1358 aa9.71□□□□□ -0.86
PKNOX1-207ENST00000557820 RRBP1Q9P2E9 1410 aaKnown RBP9.7□□□□□ -0.86
PKNOX1-207ENST00000557820 ANKRD50Q9ULJ7 1429 aa9.7□□□□□ -0.86
PKNOX1-207ENST00000557820 CEP170BQ9Y4F5 1589 aaPredicted RBP9.7□□□□□ -0.86
PKNOX1-207ENST00000557820 DEPDC5O75140 1603 aa9.7□□□□□ -0.86
PKNOX1-207ENST00000557820 KCNA4P22459 653 aa9.69□□□□□ -0.86
PKNOX1-207ENST00000557820 ZC3H13Q5T200 1668 aaKnown RBP9.69□□□□□ -0.86
PKNOX1-207ENST00000557820 FAM135AQ9P2D6 1515 aa9.69□□□□□ -0.86
PKNOX1-207ENST00000557820 STRCQ7RTU9 1775 aa9.68□□□□□ -0.86
PKNOX1-207ENST00000557820 ZNF142P52746 1687 aaPredicted RBP9.68□□□□□ -0.86
PKNOX1-207ENST00000557820 ERVK-7P63135 1459 aa9.68□□□□□ -0.86
PKNOX1-207ENST00000557820 NCKAP5LQ9HCH0 1330 aa9.67□□□□□ -0.86
PKNOX1-207ENST00000557820 VWDEQ8N2E2 1590 aa9.67□□□□□ -0.86
PKNOX1-207ENST00000557820 A2ML1A8K2U0 1454 aa9.66□□□□□ -0.86
PKNOX1-207ENST00000557820 ROCK1Q13464 1354 aa9.66□□□□□ -0.86
PKNOX1-207ENST00000557820 SPATA31D1Q6ZQQ2 1576 aa9.66□□□□□ -0.86
PKNOX1-207ENST00000557820 KANK1Q14678 1352 aa9.65□□□□□ -0.86
PKNOX1-207ENST00000557820 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.65□□□□□ -0.86
PKNOX1-207ENST00000557820 SETD1BQ9UPS6 1966 aaKnown RBP9.64□□□□□ -0.87
PKNOX1-207ENST00000557820 CFAP65Q6ZU64 1925 aaKnown RBP9.64□□□□□ -0.87
PKNOX1-207ENST00000557820 UNC13BO14795 1591 aa9.64□□□□□ -0.87
PKNOX1-207ENST00000557820 HOXD11P31277 338 aaPredicted RBP9.64□□□□□ -0.87
PKNOX1-207ENST00000557820 EFCAB6Q5THR3 1501 aa9.64□□□□□ -0.87
PKNOX1-207ENST00000557820 LMTK2Q8IWU2 1503 aa9.63□□□□□ -0.87
PKNOX1-207ENST00000557820 SYNMO15061 1565 aa9.63□□□□□ -0.87
PKNOX1-207ENST00000557820 UGGT1Q9NYU2 1555 aa9.63□□□□□ -0.87
PKNOX1-207ENST00000557820 NLRP1Q9C000 1473 aa9.62□□□□□ -0.87
PKNOX1-207ENST00000557820 CNKSR2Q8WXI2 1034 aa9.62□□□□□ -0.87
PKNOX1-207ENST00000557820 ARHGAP31Q2M1Z3 1444 aa9.62□□□□□ -0.87
PKNOX1-207ENST00000557820 PLA2R1Q13018 1463 aa9.61□□□□□ -0.87
PKNOX1-207ENST00000557820 NAIPQ13075 1403 aa9.61□□□□□ -0.87
PKNOX1-207ENST00000557820 NEURL4Q96JN8 1562 aa9.61□□□□□ -0.87
PKNOX1-207ENST00000557820 NUP155O75694 1391 aa9.61□□□□□ -0.87
PKNOX1-207ENST00000557820 TET3O43151 1660 aa9.61□□□□□ -0.87
PKNOX1-207ENST00000557820 GCC2Q8IWJ2 1684 aa9.61□□□□□ -0.87
PKNOX1-207ENST00000557820 PIK3C2BO00750 1634 aa9.6□□□□□ -0.87
PKNOX1-207ENST00000557820 IQGAP3Q86VI3 1631 aa9.6□□□□□ -0.87
PKNOX1-207ENST00000557820 ZNF335Q9H4Z2 1342 aaPredicted RBP9.59□□□□□ -0.87
PKNOX1-207ENST00000557820 PTPRTO14522 1441 aa9.59□□□□□ -0.87
PKNOX1-207ENST00000557820 E9PCH4 1651 aa9.59□□□□□ -0.87
PKNOX1-207ENST00000557820 ILDR1Q86SU0 546 aaPredicted RBP9.59□□□□□ -0.87
PKNOX1-207ENST00000557820 UBR1Q8IWV7 1749 aa9.59□□□□□ -0.87
PKNOX1-207ENST00000557820 NOS1P29475 1434 aa9.58□□□□□ -0.88
PKNOX1-207ENST00000557820 POLR1AO95602 1720 aaPredicted RBP9.58□□□□□ -0.88
PKNOX1-207ENST00000557820 HFM1A2PYH4 1435 aa9.57□□□□□ -0.88
PKNOX1-207ENST00000557820 IDI1Q13907 227 aa9.57□□□□□ -0.88
PKNOX1-207ENST00000557820 DCAF8L1A6NGE4 600 aa9.56□□□□□ -0.88
PKNOX1-207ENST00000557820 PKD2Q13563 968 aa9.56□□□□□ -0.88
PKNOX1-207ENST00000557820 TRIM52Q96A61 297 aa9.56□□□□□ -0.88
PKNOX1-207ENST00000557820 LTBP4Q8N2S1 1624 aa9.56□□□□□ -0.88
PKNOX1-207ENST00000557820 ADGRB3O60242 1522 aa9.56□□□□□ -0.88
PKNOX1-207ENST00000557820 NPHP4O75161 1426 aaPredicted RBP9.56□□□□□ -0.88
PKNOX1-207ENST00000557820 RPRD2Q5VT52 1461 aaKnown RBP9.55□□□□□ -0.88
PKNOX1-207ENST00000557820 CHGAP10645 457 aaKnown RBP9.55□□□□□ -0.88
PKNOX1-207ENST00000557820 LTKP29376 864 aa9.55□□□□□ -0.88
PKNOX1-207ENST00000557820 ANKLE2Q86XL3 938 aa9.55□□□□□ -0.88
PKNOX1-207ENST00000557820 THEMISQ8N1K5 641 aaPredicted RBP9.55□□□□□ -0.88
PKNOX1-207ENST00000557820 CERKQ8TCT0 537 aa9.55□□□□□ -0.88
PKNOX1-207ENST00000557820 RNF216Q9NWF9 866 aaPredicted RBP9.55□□□□□ -0.88
PKNOX1-207ENST00000557820 STAG3Q9UJ98 1225 aa9.55□□□□□ -0.88
PKNOX1-207ENST00000557820 IQGAP1P46940 1657 aa9.54□□□□□ -0.88
PKNOX1-207ENST00000557820 SCAF11Q99590 1463 aaKnown RBP9.53□□□□□ -0.88
PKNOX1-207ENST00000557820 ARHGAP23Q9P227 1491 aa9.53□□□□□ -0.88
PKNOX1-207ENST00000557820 TMEM2Q9UHN6 1383 aa9.53□□□□□ -0.88
PKNOX1-207ENST00000557820 SLIT1O75093 1534 aa9.53□□□□□ -0.88
PKNOX1-207ENST00000557820 NUTM2DQ5VT03 806 aaPredicted RBP9.53□□□□□ -0.88
PKNOX1-207ENST00000557820 MYO5BQ9ULV0 1848 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms