RNA–Protein interactions for RNA: ENST00000557797.5

SHC4-204, Transcript of SHC adaptor protein 4, humanhuman

TSL 3

Gene SHC4, Length 821 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-204ENST00000557797 DIP2BQ9P265 1576 aa13.21□□□□□ -0.29
SHC4-204ENST00000557797 PPP1R15BQ5SWA1 713 aa13.21□□□□□ -0.29
SHC4-204ENST00000557797 HECW2Q9P2P5 1572 aa13.2□□□□□ -0.3
SHC4-204ENST00000557797 MAPKBP1O60336 1514 aa13.2□□□□□ -0.3
SHC4-204ENST00000557797 SLC34A2O95436 690 aa13.2□□□□□ -0.3
SHC4-204ENST00000557797 ZNF710Q8N1W2 664 aa13.2□□□□□ -0.3
SHC4-204ENST00000557797 TSHZ2Q9NRE2 1034 aa13.2□□□□□ -0.3
SHC4-204ENST00000557797 NUP160Q12769 1436 aa13.2□□□□□ -0.3
SHC4-204ENST00000557797 GRIN2AQ12879 1464 aa13.19□□□□□ -0.3
SHC4-204ENST00000557797 FAM69CQ0P6D2 419 aa13.19□□□□□ -0.3
SHC4-204ENST00000557797 GPR153Q6NV75 609 aa13.19□□□□□ -0.3
SHC4-204ENST00000557797 DDX27Q96GQ7 796 aaKnown RBP13.19□□□□□ -0.3
SHC4-204ENST00000557797 ZSWIM6Q9HCJ5 1215 aa13.19□□□□□ -0.3
SHC4-204ENST00000557797 ABCA5Q8WWZ7 1642 aa13.18□□□□□ -0.3
SHC4-204ENST00000557797 POTEMA6NI47 508 aa13.18□□□□□ -0.3
SHC4-204ENST00000557797 HOXB1P14653 301 aaPredicted RBP13.18□□□□□ -0.3
SHC4-204ENST00000557797 POTEGQ6S5H5 508 aa13.18□□□□□ -0.3
SHC4-204ENST00000557797 MARVELD3Q96A59 401 aa13.18□□□□□ -0.3
SHC4-204ENST00000557797 RIMBP2O15034 1052 aa13.17□□□□□ -0.3
SHC4-204ENST00000557797 CUX1P39880 1505 aa13.17□□□□□ -0.3
SHC4-204ENST00000557797 FBXO41Q8TF61 875 aa13.15□□□□□ -0.3
SHC4-204ENST00000557797 ADGRL1O94910 1474 aa13.15□□□□□ -0.3
SHC4-204ENST00000557797 ARSIQ5FYB1 569 aa13.14□□□□□ -0.31
SHC4-204ENST00000557797 KHSRPQ92945 711 aaKnown RBP eCLIP13.14□□□□□ -0.31
SHC4-204ENST00000557797 PTCD2Q8WV60 388 aaKnown RBP13.13□□□□□ -0.31
SHC4-204ENST00000557797 PCDHGA4Q9Y5G9 962 aa13.13□□□□□ -0.31
SHC4-204ENST00000557797 ABCA10Q8WWZ4 1543 aa13.12□□□□□ -0.31
SHC4-204ENST00000557797 ADAMTS12P58397 1594 aa13.11□□□□□ -0.31
SHC4-204ENST00000557797 TSPOAP1O95153 1857 aa13.1□□□□□ -0.31
SHC4-204ENST00000557797 EMP3P54852 163 aa13.1□□□□□ -0.31
SHC4-204ENST00000557797 OXER1Q8TDS5 423 aa13.09□□□□□ -0.31
SHC4-204ENST00000557797 EMILIN3Q9NT22 766 aa13.07□□□□□ -0.32
SHC4-204ENST00000557797 ADCY10Q96PN6 1610 aa13.06□□□□□ -0.32
SHC4-204ENST00000557797 PRG4Q92954 1404 aaPredicted RBP13.06□□□□□ -0.32
SHC4-204ENST00000557797 POTEB3A0JP26 581 aa13.06□□□□□ -0.32
SHC4-204ENST00000557797 CAMK2BQ13554 666 aa13.06□□□□□ -0.32
SHC4-204ENST00000557797 POTEBQ6S5H4 581 aa13.06□□□□□ -0.32
SHC4-204ENST00000557797 UPF1Q92900 1129 aaKnown RBP eCLIP13.06□□□□□ -0.32
SHC4-204ENST00000557797 NUDT7P0C024 238 aa13.05□□□□□ -0.32
SHC4-204ENST00000557797 FAM205CA6NFA0 338 aa13.03□□□□□ -0.32
SHC4-204ENST00000557797 FHAD1B1AJZ9 1412 aa13.03□□□□□ -0.32
SHC4-204ENST00000557797 HS3ST6Q96QI5 342 aa13.02□□□□□ -0.33
SHC4-204ENST00000557797 LMTK3Q96Q04 1460 aa13.01□□□□□ -0.33
SHC4-204ENST00000557797 PPRC1Q5VV67 1664 aaKnown RBP13□□□□□ -0.33
SHC4-204ENST00000557797 ERBB3P21860 1342 aa12.99□□□□□ -0.33
SHC4-204ENST00000557797 JPH4Q96JJ6 628 aa12.99□□□□□ -0.33
SHC4-204ENST00000557797 TBC1D12O60347 775 aa12.98□□□□□ -0.33
SHC4-204ENST00000557797 HAP1P54257 671 aaPredicted RBP12.98□□□□□ -0.33
SHC4-204ENST00000557797 ZNF316A6NFI3 1004 aaPredicted RBP12.97□□□□□ -0.33
SHC4-204ENST00000557797 WDR70Q9NW82 654 aa12.97□□□□□ -0.33
SHC4-204ENST00000557797 LHX6Q9UPM6 363 aa12.97□□□□□ -0.33
SHC4-204ENST00000557797 VARS2Q5ST30 1063 aaKnown RBP12.96□□□□□ -0.33
SHC4-204ENST00000557797 GLI2P10070 1586 aa12.95□□□□□ -0.34
SHC4-204ENST00000557797 ERICH3Q5RHP9 1530 aa12.95□□□□□ -0.34
SHC4-204ENST00000557797 RUSC2Q8N2Y8 1516 aa12.95□□□□□ -0.34
SHC4-204ENST00000557797 E2F4Q16254 413 aa12.94□□□□□ -0.34
SHC4-204ENST00000557797 CDAN1Q8IWY9 1227 aa12.94□□□□□ -0.34
SHC4-204ENST00000557797 TOP2BQ02880 1626 aa12.93□□□□□ -0.34
SHC4-204ENST00000557797 COL17A1Q9UMD9 1497 aaPredicted RBP12.92□□□□□ -0.34
SHC4-204ENST00000557797 SOCS7O14512 581 aa12.92□□□□□ -0.34
SHC4-204ENST00000557797 DPYSL4O14531 572 aa12.92□□□□□ -0.34
SHC4-204ENST00000557797 MAP3K9P80192 1104 aa12.92□□□□□ -0.34
SHC4-204ENST00000557797 EVI5O60447 810 aa12.91□□□□□ -0.34
SHC4-204ENST00000557797 ANO8Q9HCE9 1232 aaPredicted RBP12.91□□□□□ -0.34
SHC4-204ENST00000557797 WRNQ14191 1432 aaPredicted RBP eCLIP12.89□□□□□ -0.35
SHC4-204ENST00000557797 PCDH10Q9P2E7 1040 aa12.89□□□□□ -0.35
SHC4-204ENST00000557797 KDM2AQ9Y2K7 1162 aa12.89□□□□□ -0.35
SHC4-204ENST00000557797 ARIH1Q9Y4X5 557 aaPredicted RBP12.88□□□□□ -0.35
SHC4-204ENST00000557797 ZNF687Q8N1G0 1237 aa12.86□□□□□ -0.35
SHC4-204ENST00000557797 KRTAP3-3Q9BYR6 98 aa12.86□□□□□ -0.35
SHC4-204ENST00000557797 KRTAP3-2Q9BYR7 98 aa12.86□□□□□ -0.35
SHC4-204ENST00000557797 PLB1Q6P1J6 1458 aa12.85□□□□□ -0.35
SHC4-204ENST00000557797 KCNV2Q8TDN2 545 aa12.85□□□□□ -0.35
SHC4-204ENST00000557797 MAP3K4Q9Y6R4 1608 aa12.84□□□□□ -0.35
SHC4-204ENST00000557797 ABCC2Q92887 1545 aa12.84□□□□□ -0.35
SHC4-204ENST00000557797 ASXL2Q76L83 1435 aa12.84□□□□□ -0.35
SHC4-204ENST00000557797 PDIA6Q15084 440 aa12.83□□□□□ -0.36
SHC4-204ENST00000557797 ILDR2Q71H61 639 aa12.83□□□□□ -0.36
SHC4-204ENST00000557797 TEX14Q8IWB6 1497 aa12.83□□□□□ -0.36
SHC4-204ENST00000557797 PSDA5PKW4 1024 aaPredicted RBP12.82□□□□□ -0.36
SHC4-204ENST00000557797 POTEEQ6S8J3 1075 aa12.82□□□□□ -0.36
SHC4-204ENST00000557797 BIVM-ERCC5R4GMW8 1640 aa12.81□□□□□ -0.36
SHC4-204ENST00000557797 FOSBP53539 338 aa12.81□□□□□ -0.36
SHC4-204ENST00000557797 KIAA0586Q9BVV6 1533 aa12.79□□□□□ -0.36
SHC4-204ENST00000557797 ZNF454Q8N9F8 522 aa12.79□□□□□ -0.36
SHC4-204ENST00000557797 PPP4R3BQ5MIZ7 849 aa12.78□□□□□ -0.36
SHC4-204ENST00000557797 VSIG10Q8N0Z9 540 aa12.78□□□□□ -0.36
SHC4-204ENST00000557797 PTPRGP23470 1445 aa12.77□□□□□ -0.37
SHC4-204ENST00000557797 EPRSP07814 1512 aaKnown RBP12.77□□□□□ -0.37
SHC4-204ENST00000557797 CUL7Q14999 1698 aa12.77□□□□□ -0.37
SHC4-204ENST00000557797 SPDYE16A6NNV3 312 aaPredicted RBP12.76□□□□□ -0.37
SHC4-204ENST00000557797 PTGER2P43116 358 aa12.76□□□□□ -0.37
SHC4-204ENST00000557797 ARHGEF1Q92888 912 aaKnown RBP12.76□□□□□ -0.37
SHC4-204ENST00000557797 PCDHGA10Q9Y5H3 936 aa12.76□□□□□ -0.37
SHC4-204ENST00000557797 DISP3Q9P2K9 1392 aa12.76□□□□□ -0.37
SHC4-204ENST00000557797 UHRF1BP1LA0JNW5 1464 aa12.76□□□□□ -0.37
SHC4-204ENST00000557797 AXIN2Q9Y2T1 843 aa12.74□□□□□ -0.37
SHC4-204ENST00000557797 P3H3Q8IVL6 736 aa12.73□□□□□ -0.37
SHC4-204ENST00000557797 PCF11O94913 1555 aaKnown RBP12.73□□□□□ -0.37
SHC4-204ENST00000557797 PBX2P40425 430 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms