RNA–Protein interactions for RNA: ENST00000557750.1

RCCD1-209, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 1,696 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-209ENST00000557750 NCKAP5LQ9HCH0 1330 aa18.63■□□□□ 0.57
RCCD1-209ENST00000557750 ITGAEP38570 1179 aa18.63■□□□□ 0.57
RCCD1-209ENST00000557750 DNMT1P26358 1616 aaKnown RBP18.62■□□□□ 0.57
RCCD1-209ENST00000557750 INO80Q9ULG1 1556 aaPredicted RBP18.62■□□□□ 0.57
RCCD1-209ENST00000557750 CHIC2Q9UKJ5 165 aa18.61■□□□□ 0.57
RCCD1-209ENST00000557750 IQSEC2Q5JU85 1478 aa18.61■□□□□ 0.57
RCCD1-209ENST00000557750 SOCS7O14512 581 aa18.6■□□□□ 0.57
RCCD1-209ENST00000557750 A2MP01023 1474 aa18.59■□□□□ 0.57
RCCD1-209ENST00000557750 SHANK2Q9UPX8 1470 aa18.59■□□□□ 0.57
RCCD1-209ENST00000557750 CLTCQ00610 1675 aaKnown RBP18.58■□□□□ 0.57
RCCD1-209ENST00000557750 GGT6Q6P531 493 aa18.58■□□□□ 0.57
RCCD1-209ENST00000557750 PLXNC1O60486 1568 aa18.58■□□□□ 0.56
RCCD1-209ENST00000557750 ZNF335Q9H4Z2 1342 aaPredicted RBP18.57■□□□□ 0.56
RCCD1-209ENST00000557750 SPATA31D1Q6ZQQ2 1576 aa18.57■□□□□ 0.56
RCCD1-209ENST00000557750 MAST1Q9Y2H9 1570 aa18.57■□□□□ 0.56
RCCD1-209ENST00000557750 PTPRKQ15262 1439 aa18.57■□□□□ 0.56
RCCD1-209ENST00000557750 CROCC2H7BZ55 1655 aa18.55■□□□□ 0.56
RCCD1-209ENST00000557750 RRP7BPQ9NSQ0 103 aa18.55■□□□□ 0.56
RCCD1-209ENST00000557750 PKD2Q13563 968 aa18.54■□□□□ 0.56
RCCD1-209ENST00000557750 ANKRD30AQ9BXX3 1397 aa18.54■□□□□ 0.56
RCCD1-209ENST00000557750 MYO3AQ8NEV4 1616 aa18.54■□□□□ 0.56
RCCD1-209ENST00000557750 PLA2R1Q13018 1463 aa18.53■□□□□ 0.56
RCCD1-209ENST00000557750 KIF15Q9NS87 1388 aa18.53■□□□□ 0.56
RCCD1-209ENST00000557750 UBAP1LF5GYI3 381 aa18.52■□□□□ 0.56
RCCD1-209ENST00000557750 ZNF142P52746 1687 aaPredicted RBP18.52■□□□□ 0.55
RCCD1-209ENST00000557750 CEP170BQ9Y4F5 1589 aaPredicted RBP18.52■□□□□ 0.55
RCCD1-209ENST00000557750 DHX29Q7Z478 1369 aaKnown RBP18.51■□□□□ 0.55
RCCD1-209ENST00000557750 PPP6R1Q9UPN7 881 aa18.51■□□□□ 0.55
RCCD1-209ENST00000557750 ADGRL2O95490 1459 aa18.5■□□□□ 0.55
RCCD1-209ENST00000557750 ADGBQ8N7X0 1667 aa18.49■□□□□ 0.55
RCCD1-209ENST00000557750 ROCK1Q13464 1354 aa18.48■□□□□ 0.55
RCCD1-209ENST00000557750 DUOX2Q9NRD8 1548 aa18.47■□□□□ 0.55
RCCD1-209ENST00000557750 KIF3BO15066 747 aa18.47■□□□□ 0.55
RCCD1-209ENST00000557750 A2ML1A8K2U0 1454 aa18.45■□□□□ 0.54
RCCD1-209ENST00000557750 FBXO31Q5XUX0 539 aaPredicted RBP18.44■□□□□ 0.54
RCCD1-209ENST00000557750 ERBINQ96RT1 1412 aa18.43■□□□□ 0.54
RCCD1-209ENST00000557750 ANKRD50Q9ULJ7 1429 aa18.42■□□□□ 0.54
RCCD1-209ENST00000557750 TNRQ92752 1358 aa18.41■□□□□ 0.54
RCCD1-209ENST00000557750 EIF2AK4Q9P2K8 1649 aaKnown RBP18.37■□□□□ 0.53
RCCD1-209ENST00000557750 PZPP20742 1482 aa18.36■□□□□ 0.53
RCCD1-209ENST00000557750 WASHC2CQ9Y4E1 1318 aa18.36■□□□□ 0.53
RCCD1-209ENST00000557750 NEURL4Q96JN8 1562 aa18.36■□□□□ 0.53
RCCD1-209ENST00000557750 HFM1A2PYH4 1435 aa18.36■□□□□ 0.53
RCCD1-209ENST00000557750 NAIPQ13075 1403 aa18.36■□□□□ 0.53
RCCD1-209ENST00000557750 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.36■□□□□ 0.538e-7■■■□□ 14.6
RCCD1-209ENST00000557750 KDM5DQ9BY66 1539 aa18.35■□□□□ 0.53
RCCD1-209ENST00000557750 PIP4K2BP78356 416 aa18.35■□□□□ 0.53
RCCD1-209ENST00000557750 SCAF1Q9H7N4 1312 aaKnown RBP18.35■□□□□ 0.53
RCCD1-209ENST00000557750 HSPA1LP34931 641 aa18.34■□□□□ 0.53
RCCD1-209ENST00000557750 POLR1AO95602 1720 aaPredicted RBP18.33■□□□□ 0.52
RCCD1-209ENST00000557750 TRIM26Q12899 539 aaPredicted RBP18.33■□□□□ 0.52
RCCD1-209ENST00000557750 ANKLE2Q86XL3 938 aa18.33■□□□□ 0.52
RCCD1-209ENST00000557750 CPS1P31327 1500 aa18.33■□□□□ 0.52
RCCD1-209ENST00000557750 FAM135AQ9P2D6 1515 aa18.32■□□□□ 0.52
RCCD1-209ENST00000557750 TOM1O60784 492 aa18.32■□□□□ 0.52
RCCD1-209ENST00000557750 THEMISQ8N1K5 641 aaPredicted RBP18.32■□□□□ 0.52
RCCD1-209ENST00000557750 RNF17Q9BXT8 1623 aaKnown RBP18.31■□□□□ 0.52
RCCD1-209ENST00000557750 KANK1Q14678 1352 aa18.3■□□□□ 0.52
RCCD1-209ENST00000557750 NLRP1Q9C000 1473 aa18.29■□□□□ 0.52
RCCD1-209ENST00000557750 VWDEQ8N2E2 1590 aa18.29■□□□□ 0.52
RCCD1-209ENST00000557750 PRDM15P57071 1507 aaPredicted RBP18.28■□□□□ 0.52
RCCD1-209ENST00000557750 MROH1Q8NDA8 1641 aa18.28■□□□□ 0.52
RCCD1-209ENST00000557750 GCC2Q8IWJ2 1684 aa18.28■□□□□ 0.52
RCCD1-209ENST00000557750 NPHP4O75161 1426 aaPredicted RBP18.27■□□□□ 0.52
RCCD1-209ENST00000557750 UGGT1Q9NYU2 1555 aa18.27■□□□□ 0.52
RCCD1-209ENST00000557750 SETD5Q9C0A6 1442 aa18.27■□□□□ 0.51
RCCD1-209ENST00000557750 MED14O60244 1454 aa18.27■□□□□ 0.51
RCCD1-209ENST00000557750 DEPDC5O75140 1603 aa18.26■□□□□ 0.51
RCCD1-209ENST00000557750 NUP155O75694 1391 aa18.25■□□□□ 0.51
RCCD1-209ENST00000557750 MED1Q15648 1581 aaPredicted RBP18.25■□□□□ 0.51
RCCD1-209ENST00000557750 ABCC3O15438 1527 aa18.25■□□□□ 0.51
RCCD1-209ENST00000557750 TRIM52Q96A61 297 aa18.25■□□□□ 0.51
RCCD1-209ENST00000557750 UNC13BO14795 1591 aa18.23■□□□□ 0.51
RCCD1-209ENST00000557750 ALKQ9UM73 1620 aa18.22■□□□□ 0.51
RCCD1-209ENST00000557750 RAB3GAP2Q9H2M9 1393 aa18.22■□□□□ 0.51
RCCD1-209ENST00000557750 ZC3H13Q5T200 1668 aaKnown RBP18.2■□□□□ 0.5
RCCD1-209ENST00000557750 IQGAP1P46940 1657 aa18.19■□□□□ 0.5
RCCD1-209ENST00000557750 LMTK2Q8IWU2 1503 aa18.19■□□□□ 0.5
RCCD1-209ENST00000557750 ERVK-7P63135 1459 aa18.19■□□□□ 0.5
RCCD1-209ENST00000557750 CEP152O94986 1710 aa18.18■□□□□ 0.5
RCCD1-209ENST00000557750 LRRC7Q96NW7 1537 aa18.18■□□□□ 0.5
RCCD1-209ENST00000557750 STRCP1A6NGW2 1772 aa18.17■□□□□ 0.5
RCCD1-209ENST00000557750 SENP3Q9H4L4 574 aaPredicted RBP18.16■□□□□ 0.5
RCCD1-209ENST00000557750 ACIN1Q9UKV3 1341 aaKnown RBP18.16■□□□□ 0.5
RCCD1-209ENST00000557750 ARHGAP31Q2M1Z3 1444 aa18.15■□□□□ 0.5
RCCD1-209ENST00000557750 IQGAP3Q86VI3 1631 aa18.15■□□□□ 0.5
RCCD1-209ENST00000557750 PHF23Q9BUL5 403 aaPredicted RBP18.15■□□□□ 0.5
RCCD1-209ENST00000557750 SLC4A1APQ9BWU0 796 aaKnown RBP18.15■□□□□ 0.5
RCCD1-209ENST00000557750 PCGF6Q9BYE7 350 aa18.14■□□□□ 0.49
RCCD1-209ENST00000557750 EFCAB6Q5THR3 1501 aa18.14■□□□□ 0.49
RCCD1-209ENST00000557750 HRCP23327 699 aa18.12■□□□□ 0.49
RCCD1-209ENST00000557750 LTKP29376 864 aa18.12■□□□□ 0.49
RCCD1-209ENST00000557750 TET3O43151 1660 aa18.11■□□□□ 0.49
RCCD1-209ENST00000557750 UBR1Q8IWV7 1749 aa18.11■□□□□ 0.49
RCCD1-209ENST00000557750 CFAP65Q6ZU64 1925 aaKnown RBP18.11■□□□□ 0.49
RCCD1-209ENST00000557750 SCAF11Q99590 1463 aaKnown RBP18.11■□□□□ 0.49
RCCD1-209ENST00000557750 SYNMO15061 1565 aa18.1■□□□□ 0.49
RCCD1-209ENST00000557750 TXNDC2Q86VQ3 553 aa18.1■□□□□ 0.49
RCCD1-209ENST00000557750 RPRD2Q5VT52 1461 aaKnown RBP18.09■□□□□ 0.49
RCCD1-209ENST00000557750 MPHOSPH9Q99550 1183 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms