RNA–Protein interactions for RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-208ENST00000557702 UBTFP17480 764 aaKnown RBP15.65■□□□□ 0.1
PABPN1-208ENST00000557702 DEPDC5O75140 1603 aa15.65■□□□□ 0.1
PABPN1-208ENST00000557702 UPF1Q92900 1129 aaKnown RBP eCLIP15.64■□□□□ 0.09
PABPN1-208ENST00000557702 ARHGAP35Q9NRY4 1499 aa15.64■□□□□ 0.09
PABPN1-208ENST00000557702 FAM135BQ49AJ0 1406 aa15.63■□□□□ 0.09
PABPN1-208ENST00000557702 KIAA1107Q9UPP5 1409 aa15.63■□□□□ 0.09
PABPN1-208ENST00000557702 CDC42BPAQ5VT25 1732 aa15.63■□□□□ 0.09
PABPN1-208ENST00000557702 UGGT1Q9NYU2 1555 aa15.62■□□□□ 0.09
PABPN1-208ENST00000557702 MIA2Q96PC5 1412 aa15.62■□□□□ 0.09
PABPN1-208ENST00000557702 PZPP20742 1482 aa15.62■□□□□ 0.09
PABPN1-208ENST00000557702 NLRP1Q9C000 1473 aa15.62■□□□□ 0.09
PABPN1-208ENST00000557702 STRCP1A6NGW2 1772 aa15.62■□□□□ 0.09
PABPN1-208ENST00000557702 SYNMO15061 1565 aa15.62■□□□□ 0.09
PABPN1-208ENST00000557702 IQGAP1P46940 1657 aa15.61■□□□□ 0.09
PABPN1-208ENST00000557702 PLEKHH2Q8IVE3 1493 aa15.61■□□□□ 0.09
PABPN1-208ENST00000557702 CFDP1Q9UEE9 299 aaPredicted RBP15.61■□□□□ 0.09
PABPN1-208ENST00000557702 SETD1AO15047 1707 aaKnown RBP15.6■□□□□ 0.09
PABPN1-208ENST00000557702 INO80Q9ULG1 1556 aaPredicted RBP15.6■□□□□ 0.09
PABPN1-208ENST00000557702 WASHC2CQ9Y4E1 1318 aa15.6■□□□□ 0.09
PABPN1-208ENST00000557702 GPATCH8Q9UKJ3 1502 aaKnown RBP15.59■□□□□ 0.09
PABPN1-208ENST00000557702 LRRIQ1Q96JM4 1722 aa15.59■□□□□ 0.09
PABPN1-208ENST00000557702 CCDC18Q5T9S5 1454 aa15.59■□□□□ 0.09
PABPN1-208ENST00000557702 KIF3BO15066 747 aa15.58■□□□□ 0.08
PABPN1-208ENST00000557702 EHMT2Q96KQ7 1210 aa15.58■□□□□ 0.08
PABPN1-208ENST00000557702 DHX29Q7Z478 1369 aaKnown RBP15.57■□□□□ 0.08
PABPN1-208ENST00000557702 ADGBQ8N7X0 1667 aa15.57■□□□□ 0.08
PABPN1-208ENST00000557702 SRCAPQ6ZRS2 3230 aa15.55■□□□□ 0.08
PABPN1-208ENST00000557702 KDM5DQ9BY66 1539 aa15.54■□□□□ 0.08
PABPN1-208ENST00000557702 CASKIN1Q8WXD9 1431 aa15.53■□□□□ 0.08
PABPN1-208ENST00000557702 TRIM52Q96A61 297 aa15.53■□□□□ 0.08
PABPN1-208ENST00000557702 RTEL1-TNFRSF6BF6WH68 1400 aa15.51■□□□□ 0.07
PABPN1-208ENST00000557702 CCNB3Q8WWL7 1395 aa15.51■□□□□ 0.07
PABPN1-208ENST00000557702 ZNF772Q68DY9 489 aaPredicted RBP15.51■□□□□ 0.07
PABPN1-208ENST00000557702 JCADQ9P266 1359 aa15.49■□□□□ 0.07
PABPN1-208ENST00000557702 TXNDC2Q86VQ3 553 aa15.49■□□□□ 0.07
PABPN1-208ENST00000557702 SCAF11Q99590 1463 aaKnown RBP15.48■□□□□ 0.07
PABPN1-208ENST00000557702 CHIC1Q5VXU3 224 aa15.48■□□□□ 0.07
PABPN1-208ENST00000557702 ZNF644Q9H582 1327 aaPredicted RBP15.47■□□□□ 0.07
PABPN1-208ENST00000557702 LTKP29376 864 aa15.47■□□□□ 0.07
PABPN1-208ENST00000557702 MEX3CQ5U5Q3 659 aaKnown RBP15.47■□□□□ 0.07
PABPN1-208ENST00000557702 XIRP1Q702N8 1843 aaKnown RBP15.47■□□□□ 0.07
PABPN1-208ENST00000557702 ZC3H13Q5T200 1668 aaKnown RBP15.47■□□□□ 0.07
PABPN1-208ENST00000557702 TMEM94Q12767 1356 aa15.47■□□□□ 0.07
PABPN1-208ENST00000557702 RXRBP28702 533 aa15.46■□□□□ 0.07
PABPN1-208ENST00000557702 EID1Q9Y6B2 187 aa15.46■□□□□ 0.07
PABPN1-208ENST00000557702 ROBO1Q9Y6N7 1651 aa15.46■□□□□ 0.07
PABPN1-208ENST00000557702 MBD5Q9P267 1494 aa15.45■□□□□ 0.06
PABPN1-208ENST00000557702 PROSER2Q86WR7 435 aaPredicted RBP15.43■□□□□ 0.06
PABPN1-208ENST00000557702 LRRC9Q6ZRR7 1453 aa15.43■□□□□ 0.06
PABPN1-208ENST00000557702 SPATA31A6Q5VVP1 1343 aa15.43■□□□□ 0.06
PABPN1-208ENST00000557702 KCNA6P17658 529 aa15.42■□□□□ 0.06
PABPN1-208ENST00000557702 SLAIN2Q9P270 581 aa15.42■□□□□ 0.06
PABPN1-208ENST00000557702 RBM33Q96EV2 1170 aaKnown RBP15.41■□□□□ 0.06
PABPN1-208ENST00000557702 FYCO1Q9BQS8 1478 aa15.4■□□□□ 0.06
PABPN1-208ENST00000557702 RSPH4AQ5TD94 716 aa15.39■□□□□ 0.05
PABPN1-208ENST00000557702 ERVK-7P63135 1459 aa15.39■□□□□ 0.05
PABPN1-208ENST00000557702 ARHGAP23Q9P227 1491 aa15.39■□□□□ 0.05
PABPN1-208ENST00000557702 PHLPP1O60346 1717 aa15.38■□□□□ 0.05
PABPN1-208ENST00000557702 NCOA2Q15596 1464 aa15.38■□□□□ 0.05
PABPN1-208ENST00000557702 SLIT1O75093 1534 aa15.38■□□□□ 0.05
PABPN1-208ENST00000557702 MSH6P52701 1360 aa15.37■□□□□ 0.05
PABPN1-208ENST00000557702 MTUS2Q5JR59 1369 aa15.37■□□□□ 0.05
PABPN1-208ENST00000557702 FOXD1Q16676 465 aa15.37■□□□□ 0.05
PABPN1-208ENST00000557702 UBR1Q8IWV7 1749 aa15.37■□□□□ 0.05
PABPN1-208ENST00000557702 LRP6O75581 1613 aa15.36■□□□□ 0.05
PABPN1-208ENST00000557702 CDK12Q9NYV4 1490 aaPredicted RBP15.36■□□□□ 0.05
PABPN1-208ENST00000557702 MAP3K1Q13233 1512 aa15.36■□□□□ 0.05
PABPN1-208ENST00000557702 FGD6Q6ZV73 1430 aa15.34■□□□□ 0.05
PABPN1-208ENST00000557702 CCDC141Q6ZP82 1450 aa15.34■□□□□ 0.05
PABPN1-208ENST00000557702 ABCC3O15438 1527 aa15.34■□□□□ 0.05
PABPN1-208ENST00000557702 TSPY4P0CV99 314 aa15.34■□□□□ 0.05
PABPN1-208ENST00000557702 TSPY10P0CW01 314 aa15.34■□□□□ 0.05
PABPN1-208ENST00000557702 STAG3Q9UJ98 1225 aa15.34■□□□□ 0.05
PABPN1-208ENST00000557702 SLC26A8Q96RN1 970 aa15.33■□□□□ 0.04
PABPN1-208ENST00000557702 PRDM15P57071 1507 aaPredicted RBP15.33■□□□□ 0.04
PABPN1-208ENST00000557702 ZRANB1Q9UGI0 708 aa15.32■□□□□ 0.04
PABPN1-208ENST00000557702 TMEM2Q9UHN6 1383 aa15.32■□□□□ 0.04
PABPN1-208ENST00000557702 CFAP65Q6ZU64 1925 aaKnown RBP15.31■□□□□ 0.04
PABPN1-208ENST00000557702 COL16A1Q07092 1604 aaPredicted RBP15.3■□□□□ 0.04
PABPN1-208ENST00000557702 TIAM1Q13009 1591 aa15.3■□□□□ 0.04
PABPN1-208ENST00000557702 NUTM2BA6NNL0 878 aaPredicted RBP15.29■□□□□ 0.04
PABPN1-208ENST00000557702 NUTM2EB1AL46 878 aaPredicted RBP15.29■□□□□ 0.04
PABPN1-208ENST00000557702 NUTM2DQ5VT03 806 aaPredicted RBP15.29■□□□□ 0.04
PABPN1-208ENST00000557702 NUTM2AQ8IVF1 878 aaPredicted RBP15.29■□□□□ 0.04
PABPN1-208ENST00000557702 NKTRP30414 1462 aaKnown RBP15.28■□□□□ 0.04
PABPN1-208ENST00000557702 AFF2P51816 1311 aa15.28■□□□□ 0.04
PABPN1-208ENST00000557702 RBM6P78332 1123 aaKnown RBP15.27■□□□□ 0.04
PABPN1-208ENST00000557702 BCANQ96GW7 911 aa15.27■□□□□ 0.04
PABPN1-208ENST00000557702 QTRT2Q9H974 415 aaKnown RBP15.26■□□□□ 0.03
PABPN1-208ENST00000557702 RGS12O14924 1447 aa15.25■□□□□ 0.03
PABPN1-208ENST00000557702 CAMSAP2Q08AD1 1489 aa15.24■□□□□ 0.03
PABPN1-208ENST00000557702 TET3O43151 1660 aa15.24■□□□□ 0.03
PABPN1-208ENST00000557702 C14orf37Q86TY3 774 aa15.23■□□□□ 0.03
PABPN1-208ENST00000557702 ARHGAP31Q2M1Z3 1444 aa15.23■□□□□ 0.03
PABPN1-208ENST00000557702 CEP162Q5TB80 1403 aa15.23■□□□□ 0.03
PABPN1-208ENST00000557702 IDI1Q13907 227 aa15.22■□□□□ 0.03
PABPN1-208ENST00000557702 CADPS2Q86UW7 1296 aa15.22■□□□□ 0.03
PABPN1-208ENST00000557702 ATAD2Q6PL18 1390 aa15.22■□□□□ 0.03
PABPN1-208ENST00000557702 SHPRHQ149N8 1683 aa15.22■□□□□ 0.03
PABPN1-208ENST00000557702 NWD1Q149M9 1564 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms