RNA–Protein interactions for RNA: ENST00000557632.1

PSMC6-217, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 2

Gene PSMC6, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-217ENST00000557632 JPH4Q96JJ6 628 aa11.37□□□□□ -0.59
PSMC6-217ENST00000557632 ZSWIM6Q9HCJ5 1215 aa11.37□□□□□ -0.59
PSMC6-217ENST00000557632 MINK1Q8N4C8 1332 aaPredicted RBP11.36□□□□□ -0.59
PSMC6-217ENST00000557632 NUDT7P0C024 238 aa11.36□□□□□ -0.59
PSMC6-217ENST00000557632 MAP2K5Q13163 448 aa11.36□□□□□ -0.59
PSMC6-217ENST00000557632 ARSIQ5FYB1 569 aa11.36□□□□□ -0.59
PSMC6-217ENST00000557632 ZNF710Q8N1W2 664 aa11.36□□□□□ -0.59
PSMC6-217ENST00000557632 HS3ST6Q96QI5 342 aa11.36□□□□□ -0.59
PSMC6-217ENST00000557632 EMP3P54852 163 aa11.35□□□□□ -0.59
PSMC6-217ENST00000557632 KHSRPQ92945 711 aaKnown RBP eCLIP11.35□□□□□ -0.598e-7■□□□□ 9.2
PSMC6-217ENST00000557632 FBXW7Q969H0 707 aa11.35□□□□□ -0.59
PSMC6-217ENST00000557632 RBM33Q96EV2 1170 aaKnown RBP11.35□□□□□ -0.59
PSMC6-217ENST00000557632 TRIM66O15016 1216 aa11.34□□□□□ -0.59
PSMC6-217ENST00000557632 GPR153Q6NV75 609 aa11.33□□□□□ -0.6
PSMC6-217ENST00000557632 CDHR5Q9HBB8 845 aa11.33□□□□□ -0.6
PSMC6-217ENST00000557632 FAM205CA6NFA0 338 aa11.32□□□□□ -0.6
PSMC6-217ENST00000557632 FECHP22830 423 aa11.32□□□□□ -0.6
PSMC6-217ENST00000557632 FOSBP53539 338 aa11.32□□□□□ -0.6
PSMC6-217ENST00000557632 CCDC102AQ96A19 550 aa11.32□□□□□ -0.6
PSMC6-217ENST00000557632 IRF6O14896 467 aa11.31□□□□□ -0.6
PSMC6-217ENST00000557632 TSR1Q2NL82 804 aaKnown RBP11.31□□□□□ -0.6
PSMC6-217ENST00000557632 ZNF454Q8N9F8 522 aa11.31□□□□□ -0.6
PSMC6-217ENST00000557632 PDE4DQ08499 809 aa11.3□□□□□ -0.6
PSMC6-217ENST00000557632 ZDHHC16Q969W1 377 aa11.29□□□□□ -0.6
PSMC6-217ENST00000557632 NPDC1Q9NQX5 325 aaPredicted RBP11.29□□□□□ -0.6
PSMC6-217ENST00000557632 GPBP1L1Q9HC44 474 aaPredicted RBP11.28□□□□□ -0.6
PSMC6-217ENST00000557632 C6orf132Q5T0Z8 1188 aa11.25□□□□□ -0.61
PSMC6-217ENST00000557632 KDM4CQ9H3R0 1056 aa11.25□□□□□ -0.61
PSMC6-217ENST00000557632 LHX6Q9UPM6 363 aa11.25□□□□□ -0.61
PSMC6-217ENST00000557632 CERKQ8TCT0 537 aa11.24□□□□□ -0.61
PSMC6-217ENST00000557632 ADAM33Q9BZ11 813 aa11.24□□□□□ -0.61
PSMC6-217ENST00000557632 AMHR2Q16671 573 aa11.23□□□□□ -0.61
PSMC6-217ENST00000557632 PSDA5PKW4 1024 aaPredicted RBP11.22□□□□□ -0.61
PSMC6-217ENST00000557632 PPP4R3BQ5MIZ7 849 aa11.22□□□□□ -0.61
PSMC6-217ENST00000557632 HOXB1P14653 301 aaPredicted RBP11.21□□□□□ -0.61
PSMC6-217ENST00000557632 GTF3C3Q9Y5Q9 886 aa11.21□□□□□ -0.61
PSMC6-217ENST00000557632 DAXXQ9UER7 740 aaPredicted RBP11.2□□□□□ -0.62
PSMC6-217ENST00000557632 TTLL12Q14166 644 aaPredicted RBP11.17□□□□□ -0.62
PSMC6-217ENST00000557632 PADI6Q6TGC4 694 aa11.17□□□□□ -0.62
PSMC6-217ENST00000557632 PARP9Q8IXQ6 854 aa11.17□□□□□ -0.62
PSMC6-217ENST00000557632 RBM27Q9P2N5 1060 aaKnown RBP11.17□□□□□ -0.62
PSMC6-217ENST00000557632 BCL2L12Q9HB09 334 aa11.16□□□□□ -0.62
PSMC6-217ENST00000557632 IL27Q8NEV9 243 aa11.15□□□□□ -0.62
PSMC6-217ENST00000557632 PTPREP23469 700 aa11.13□□□□□ -0.63
PSMC6-217ENST00000557632 PRSS12P56730 875 aa11.13□□□□□ -0.63
PSMC6-217ENST00000557632 OATP04181 439 aa11.12□□□□□ -0.63
PSMC6-217ENST00000557632 FAM161AQ3B820 660 aa11.12□□□□□ -0.63
PSMC6-217ENST00000557632 TTC13Q8NBP0 860 aa11.12□□□□□ -0.63
PSMC6-217ENST00000557632 CDCA7LQ96GN5 454 aa11.12□□□□□ -0.63
PSMC6-217ENST00000557632 COL9A1P20849 921 aa11.11□□□□□ -0.63
PSMC6-217ENST00000557632 FAM117AQ9C073 453 aa11.11□□□□□ -0.63
PSMC6-217ENST00000557632 ADGRG1Q9Y653 693 aa11.11□□□□□ -0.63
PSMC6-217ENST00000557632 PPP1R3GB7ZBB8 358 aa11.1□□□□□ -0.63
PSMC6-217ENST00000557632 GIGYF2Q6Y7W6 1299 aaKnown RBP11.1□□□□□ -0.63
PSMC6-217ENST00000557632 METTL3Q86U44 580 aaKnown RBP11.1□□□□□ -0.63
PSMC6-217ENST00000557632 DDRGK1Q96HY6 314 aa11.1□□□□□ -0.63
PSMC6-217ENST00000557632 PHOX2BQ99453 314 aa11.1□□□□□ -0.63
PSMC6-217ENST00000557632 CLCN1P35523 988 aa11.09□□□□□ -0.63
PSMC6-217ENST00000557632 MDM2Q00987 491 aaPredicted RBP11.08□□□□□ -0.64
PSMC6-217ENST00000557632 PXYLP1Q8TE99 480 aa11.08□□□□□ -0.64
PSMC6-217ENST00000557632 REPIN1Q9BWE0 567 aaKnown RBP11.08□□□□□ -0.64
PSMC6-217ENST00000557632 GPCPD1Q9NPB8 672 aa11.08□□□□□ -0.64
PSMC6-217ENST00000557632 RBM46Q8TBY0 533 aaKnown RBP11.06□□□□□ -0.64
PSMC6-217ENST00000557632 KCNH8Q96L42 1107 aa11.06□□□□□ -0.64
PSMC6-217ENST00000557632 TMUB1Q9BVT8 246 aa11.06□□□□□ -0.64
PSMC6-217ENST00000557632 KCNK17Q96T54 332 aa11.05□□□□□ -0.64
PSMC6-217ENST00000557632 PLEKHG3A1L390 1219 aa11.04□□□□□ -0.64
PSMC6-217ENST00000557632 MS4A1P11836 297 aa11.04□□□□□ -0.64
PSMC6-217ENST00000557632 FAM198AQ9UFP1 575 aa11.04□□□□□ -0.64
PSMC6-217ENST00000557632 TSKSQ9UJT2 592 aa11.04□□□□□ -0.64
PSMC6-217ENST00000557632 ERBB3P21860 1342 aa11.04□□□□□ -0.64
PSMC6-217ENST00000557632 NLRP7Q8WX94 980 aa11.03□□□□□ -0.64
PSMC6-217ENST00000557632 TRIM6-TRIM34B2RNG4 842 aa11.02□□□□□ -0.65
PSMC6-217ENST00000557632 VARS2Q5ST30 1063 aaKnown RBP11.02□□□□□ -0.65
PSMC6-217ENST00000557632 SSTR3P32745 418 aaPredicted RBP11.01□□□□□ -0.65
PSMC6-217ENST00000557632 NBPF26B4DH59 902 aa11□□□□□ -0.65
PSMC6-217ENST00000557632 ERICH6Q7L0X2 663 aa11□□□□□ -0.65
PSMC6-217ENST00000557632 PACS2Q86VP3 889 aa11□□□□□ -0.65
PSMC6-217ENST00000557632 RNF166Q96A37 237 aaPredicted RBP11□□□□□ -0.65
PSMC6-217ENST00000557632 TIMELESSQ9UNS1 1208 aa11□□□□□ -0.65
PSMC6-217ENST00000557632 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.99□□□□□ -0.65
PSMC6-217ENST00000557632 NUDT18Q6ZVK8 323 aa10.99□□□□□ -0.65
PSMC6-217ENST00000557632 EYA1Q99502 592 aa10.99□□□□□ -0.65
PSMC6-217ENST00000557632 FAM217BQ9NTX9 383 aaPredicted RBP10.99□□□□□ -0.65
PSMC6-217ENST00000557632 ONECUT3O60422 494 aaPredicted RBP10.98□□□□□ -0.65
PSMC6-217ENST00000557632 PROX2Q3B8N5 592 aa10.98□□□□□ -0.65
PSMC6-217ENST00000557632 PNMA3Q9UL41 463 aa10.98□□□□□ -0.65
PSMC6-217ENST00000557632 RCCD1A6NED2 376 aa10.97□□□□□ -0.65
PSMC6-217ENST00000557632 PSEN2P49810 448 aa10.97□□□□□ -0.65
PSMC6-217ENST00000557632 TATDN2Q93075 761 aa10.97□□□□□ -0.65
PSMC6-217ENST00000557632 ARHGAP33O14559 1287 aa10.96□□□□□ -0.65
PSMC6-217ENST00000557632 ZBED2Q9BTP6 218 aa10.96□□□□□ -0.65
PSMC6-217ENST00000557632 C3orf80F5H4A9 247 aa10.95□□□□□ -0.66
PSMC6-217ENST00000557632 BEGAINQ9BUH8 593 aa10.95□□□□□ -0.66
PSMC6-217ENST00000557632 GOPCQ9HD26 462 aa10.95□□□□□ -0.66
PSMC6-217ENST00000557632 DNAJB2P25686 324 aa10.94□□□□□ -0.66
PSMC6-217ENST00000557632 POTEEQ6S8J3 1075 aa10.93□□□□□ -0.66
PSMC6-217ENST00000557632 MYT1LQ9UL68 1186 aa10.93□□□□□ -0.66
PSMC6-217ENST00000557632 SMAPO00193 183 aa10.92□□□□□ -0.66
PSMC6-217ENST00000557632 PBX2P40425 430 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms