RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 IQGAP3Q86VI3 1631 aa21.22■□□□□ 0.99
ARHGEF40-208ENST00000557498 COL17A1Q9UMD9 1497 aaPredicted RBP21.2■□□□□ 0.98
ARHGEF40-208ENST00000557498 TRHP20396 242 aaPredicted RBP21.2■□□□□ 0.98
ARHGEF40-208ENST00000557498 BCORL1Q5H9F3 1711 aa21.2■□□□□ 0.98
ARHGEF40-208ENST00000557498 FAM135AQ9P2D6 1515 aa21.19■□□□□ 0.98
ARHGEF40-208ENST00000557498 SLC4A1APQ9BWU0 796 aaKnown RBP21.19■□□□□ 0.98
ARHGEF40-208ENST00000557498 YEATS2Q9ULM3 1422 aa21.18■□□□□ 0.98
ARHGEF40-208ENST00000557498 RNF17Q9BXT8 1623 aaKnown RBP21.18■□□□□ 0.98
ARHGEF40-208ENST00000557498 PRDM15P57071 1507 aaPredicted RBP21.16■□□□□ 0.98
ARHGEF40-208ENST00000557498 MROH1Q8NDA8 1641 aa21.15■□□□□ 0.98
ARHGEF40-208ENST00000557498 ARHGEF40Q8TER5 1519 aa21.14■□□□□ 0.98
ARHGEF40-208ENST00000557498 VWDEQ8N2E2 1590 aa21.14■□□□□ 0.97
ARHGEF40-208ENST00000557498 REREQ9P2R6 1566 aa21.14■□□□□ 0.97
ARHGEF40-208ENST00000557498 KIF3BO15066 747 aa21.12■□□□□ 0.97
ARHGEF40-208ENST00000557498 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.12■□□□□ 0.97
ARHGEF40-208ENST00000557498 ATP10AO60312 1499 aa21.12■□□□□ 0.97
ARHGEF40-208ENST00000557498 ANKRD30BQ9BXX2 1392 aa21.1■□□□□ 0.97
ARHGEF40-208ENST00000557498 PKD2Q13563 968 aa21.1■□□□□ 0.97
ARHGEF40-208ENST00000557498 FOXD1Q16676 465 aa21.09■□□□□ 0.97
ARHGEF40-208ENST00000557498 SIN3AQ96ST3 1273 aa21.09■□□□□ 0.97
ARHGEF40-208ENST00000557498 KANK1Q14678 1352 aa21.09■□□□□ 0.97
ARHGEF40-208ENST00000557498 TET3O43151 1660 aa21.09■□□□□ 0.97
ARHGEF40-208ENST00000557498 AGLP35573 1532 aa21.05■□□□□ 0.96
ARHGEF40-208ENST00000557498 LMTK2Q8IWU2 1503 aa21.05■□□□□ 0.96
ARHGEF40-208ENST00000557498 NEUROD1Q13562 356 aa21.04■□□□□ 0.96
ARHGEF40-208ENST00000557498 CEP152O94986 1710 aa21.04■□□□□ 0.96
ARHGEF40-208ENST00000557498 E9PCH4 1651 aa21.03■□□□□ 0.96
ARHGEF40-208ENST00000557498 RPRD2Q5VT52 1461 aaKnown RBP21.01■□□□□ 0.95
ARHGEF40-208ENST00000557498 TIMELESSQ9UNS1 1208 aa21.01■□□□□ 0.95
ARHGEF40-208ENST00000557498 ZC3H13Q5T200 1668 aaKnown RBP21.01■□□□□ 0.95
ARHGEF40-208ENST00000557498 SIGLEC1Q9BZZ2 1709 aa21.01■□□□□ 0.95
ARHGEF40-208ENST00000557498 EFCAB6Q5THR3 1501 aa21■□□□□ 0.95
ARHGEF40-208ENST00000557498 ABCC3O15438 1527 aa20.99■□□□□ 0.95
ARHGEF40-208ENST00000557498 TONSLQ96HA7 1378 aa20.98■□□□□ 0.95
ARHGEF40-208ENST00000557498 GGT6Q6P531 493 aa20.97■□□□□ 0.95
ARHGEF40-208ENST00000557498 SPHKAPQ2M3C7 1700 aa20.96■□□□□ 0.95
ARHGEF40-208ENST00000557498 CAMSAP1Q5T5Y3 1602 aa20.96■□□□□ 0.95
ARHGEF40-208ENST00000557498 PLA2R1Q13018 1463 aa20.95■□□□□ 0.94
ARHGEF40-208ENST00000557498 TRPM2O94759 1503 aa20.93■□□□□ 0.94
ARHGEF40-208ENST00000557498 PTPRTO14522 1441 aa20.92■□□□□ 0.94
ARHGEF40-208ENST00000557498 CCDC144AA2RUR9 1427 aa20.91■□□□□ 0.94
ARHGEF40-208ENST00000557498 WASHC2CQ9Y4E1 1318 aa20.9■□□□□ 0.94
ARHGEF40-208ENST00000557498 NPATQ14207 1427 aa20.87■□□□□ 0.93
ARHGEF40-208ENST00000557498 PPP6R1Q9UPN7 881 aa20.87■□□□□ 0.93
ARHGEF40-208ENST00000557498 ARHGAP31Q2M1Z3 1444 aa20.87■□□□□ 0.93
ARHGEF40-208ENST00000557498 CLTCL1P53675 1640 aa20.86■□□□□ 0.93
ARHGEF40-208ENST00000557498 CLTCQ00610 1675 aaKnown RBP20.85■□□□□ 0.93
ARHGEF40-208ENST00000557498 PPP1R15AO75807 674 aaPredicted RBP20.84■□□□□ 0.93
ARHGEF40-208ENST00000557498 L3MBTL2Q969R5 705 aa20.83■□□□□ 0.93
ARHGEF40-208ENST00000557498 CNTLNQ9NXG0 1405 aa20.81■□□□□ 0.92
ARHGEF40-208ENST00000557498 PREX1Q8TCU6 1659 aa20.8■□□□□ 0.92
ARHGEF40-208ENST00000557498 ARID4BQ4LE39 1312 aaPredicted RBP20.79■□□□□ 0.92
ARHGEF40-208ENST00000557498 NOS1P29475 1434 aa20.79■□□□□ 0.92
ARHGEF40-208ENST00000557498 MLECQ14165 292 aa20.79■□□□□ 0.92
ARHGEF40-208ENST00000557498 NEURL4Q96JN8 1562 aa20.78■□□□□ 0.92
ARHGEF40-208ENST00000557498 UGGT1Q9NYU2 1555 aa20.78■□□□□ 0.92
ARHGEF40-208ENST00000557498 SPATA31E1Q6ZUB1 1445 aa20.77■□□□□ 0.91
ARHGEF40-208ENST00000557498 SYNMO15061 1565 aa20.76■□□□□ 0.91
ARHGEF40-208ENST00000557498 CFAP65Q6ZU64 1925 aaKnown RBP20.76■□□□□ 0.91
ARHGEF40-208ENST00000557498 KIF1BO60333 1816 aa20.76■□□□□ 0.91
ARHGEF40-208ENST00000557498 PIK3C2BO00750 1634 aa20.75■□□□□ 0.91
ARHGEF40-208ENST00000557498 MROH2AA6NES4 1674 aa20.75■□□□□ 0.91
ARHGEF40-208ENST00000557498 ERVK-7P63135 1459 aa20.74■□□□□ 0.91
ARHGEF40-208ENST00000557498 ADGRB3O60242 1522 aa20.72■□□□□ 0.91
ARHGEF40-208ENST00000557498 SPATA31D1Q6ZQQ2 1576 aa20.72■□□□□ 0.91
ARHGEF40-208ENST00000557498 ESF1Q9H501 851 aaKnown RBP20.71■□□□□ 0.91
ARHGEF40-208ENST00000557498 FER1L4A9Z1Z3 1794 aa20.71■□□□□ 0.91
ARHGEF40-208ENST00000557498 UHRF1BP1Q6BDS2 1440 aa20.7■□□□□ 0.9
ARHGEF40-208ENST00000557498 NBPF8Q3BBV2 869 aa20.67■□□□□ 0.9
ARHGEF40-208ENST00000557498 RGL3Q3MIN7 710 aa20.67■□□□□ 0.9
ARHGEF40-208ENST00000557498 ZMYM3Q14202 1370 aa20.67■□□□□ 0.9
ARHGEF40-208ENST00000557498 DCAF11Q8TEB1 546 aa20.66■□□□□ 0.9
ARHGEF40-208ENST00000557498 IFT172Q9UG01 1749 aa20.65■□□□□ 0.9
ARHGEF40-208ENST00000557498 FBXO31Q5XUX0 539 aaPredicted RBP20.64■□□□□ 0.89
ARHGEF40-208ENST00000557498 SLC52A1Q9NWF4 448 aa20.64■□□□□ 0.89
ARHGEF40-208ENST00000557498 RALGAPBQ86X10 1494 aa20.63■□□□□ 0.89
ARHGEF40-208ENST00000557498 PRAG1Q86YV5 1406 aa20.63■□□□□ 0.89
ARHGEF40-208ENST00000557498 ZNF316A6NFI3 1004 aaPredicted RBP20.63■□□□□ 0.89
ARHGEF40-208ENST00000557498 C3P01024 1663 aa20.62■□□□□ 0.89
ARHGEF40-208ENST00000557498 KDM2AQ9Y2K7 1162 aa20.62■□□□□ 0.89
ARHGEF40-208ENST00000557498 MADDQ8WXG6 1647 aa20.61■□□□□ 0.89
ARHGEF40-208ENST00000557498 MYOM2P54296 1465 aa20.61■□□□□ 0.89
ARHGEF40-208ENST00000557498 ADAMTSL3P82987 1691 aa20.61■□□□□ 0.89
ARHGEF40-208ENST00000557498 TRPM1Q7Z4N2 1603 aa20.6■□□□□ 0.89
ARHGEF40-208ENST00000557498 ZNF326Q5BKZ1 582 aaKnown RBP20.6■□□□□ 0.89
ARHGEF40-208ENST00000557498 TMEM131LA2VDJ0 1609 aa20.6■□□□□ 0.89
ARHGEF40-208ENST00000557498 PPLO60437 1756 aa20.59■□□□□ 0.89
ARHGEF40-208ENST00000557498 IDI1Q13907 227 aa20.59■□□□□ 0.89
ARHGEF40-208ENST00000557498 STAC3Q96MF2 364 aa20.59■□□□□ 0.89
ARHGEF40-208ENST00000557498 RIMS1Q86UR5 1692 aaKnown RBP20.58■□□□□ 0.89
ARHGEF40-208ENST00000557498 CHGAP10645 457 aaKnown RBP20.58■□□□□ 0.89
ARHGEF40-208ENST00000557498 MYO5BQ9ULV0 1848 aa20.57■□□□□ 0.88
ARHGEF40-208ENST00000557498 TNRQ92752 1358 aa20.57■□□□□ 0.88
ARHGEF40-208ENST00000557498 NEXMIFQ5QGS0 1516 aa20.55■□□□□ 0.88
ARHGEF40-208ENST00000557498 RPGRIP1LQ68CZ1 1315 aa20.54■□□□□ 0.88
ARHGEF40-208ENST00000557498 NRXN1Q9ULB1 1477 aa20.53■□□□□ 0.88
ARHGEF40-208ENST00000557498 KIAA1210Q9ULL0 1709 aa20.53■□□□□ 0.88
ARHGEF40-208ENST00000557498 LAMC1P11047 1609 aa20.53■□□□□ 0.88
ARHGEF40-208ENST00000557498 KDM5AP29375 1690 aaKnown RBP20.52■□□□□ 0.88
ARHGEF40-208ENST00000557498 A2ML1A8K2U0 1454 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms