RNA–Protein interactions for RNA: ENST00000557382.1

PPP4R3A-212, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 844 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-212ENST00000557382 MAGI2Q86UL8 1455 aa12.45□□□□□ -0.42
PPP4R3A-212ENST00000557382 RTEL1-TNFRSF6BF6WH68 1400 aa12.44□□□□□ -0.42
PPP4R3A-212ENST00000557382 KDM5CP41229 1560 aa12.43□□□□□ -0.42
PPP4R3A-212ENST00000557382 ATP10AO60312 1499 aa12.43□□□□□ -0.42
PPP4R3A-212ENST00000557382 ROCK2O75116 1388 aaKnown RBP12.4□□□□□ -0.42
PPP4R3A-212ENST00000557382 USP47Q96K76 1375 aa12.4□□□□□ -0.42
PPP4R3A-212ENST00000557382 ABCA9Q8IUA7 1624 aa12.4□□□□□ -0.42
PPP4R3A-212ENST00000557382 WDR7Q9Y4E6 1490 aa12.4□□□□□ -0.43
PPP4R3A-212ENST00000557382 HOXD11P31277 338 aaPredicted RBP12.39□□□□□ -0.43
PPP4R3A-212ENST00000557382 LAMC1P11047 1609 aa12.39□□□□□ -0.43
PPP4R3A-212ENST00000557382 KIF7Q2M1P5 1343 aa12.38□□□□□ -0.43
PPP4R3A-212ENST00000557382 CCDC144AA2RUR9 1427 aa12.38□□□□□ -0.43
PPP4R3A-212ENST00000557382 C11orf95C9JLR9 678 aaPredicted RBP12.38□□□□□ -0.43
PPP4R3A-212ENST00000557382 BCORL1Q5H9F3 1711 aa12.37□□□□□ -0.43
PPP4R3A-212ENST00000557382 RNF39Q9H2S5 420 aa12.37□□□□□ -0.43
PPP4R3A-212ENST00000557382 PRKRIP1Q9H875 184 aaPredicted RBP12.36□□□□□ -0.43
PPP4R3A-212ENST00000557382 SUPT16HQ9Y5B9 1047 aaKnown RBP12.36□□□□□ -0.43
PPP4R3A-212ENST00000557382 TRPM1Q7Z4N2 1603 aa12.36□□□□□ -0.43
PPP4R3A-212ENST00000557382 EIF2AK4Q9P2K8 1649 aaKnown RBP12.36□□□□□ -0.43
PPP4R3A-212ENST00000557382 PLA2R1Q13018 1463 aa12.35□□□□□ -0.43
PPP4R3A-212ENST00000557382 DEPDC5O75140 1603 aa12.35□□□□□ -0.43
PPP4R3A-212ENST00000557382 ZFYVE16Q7Z3T8 1539 aa12.35□□□□□ -0.43
PPP4R3A-212ENST00000557382 TRAPPC8Q9Y2L5 1435 aa12.35□□□□□ -0.43
PPP4R3A-212ENST00000557382 PRAG1Q86YV5 1406 aa12.34□□□□□ -0.43
PPP4R3A-212ENST00000557382 INO80Q9ULG1 1556 aaPredicted RBP12.34□□□□□ -0.43
PPP4R3A-212ENST00000557382 GPRASP1Q5JY77 1395 aa12.33□□□□□ -0.44
PPP4R3A-212ENST00000557382 STAC3Q96MF2 364 aa12.33□□□□□ -0.44
PPP4R3A-212ENST00000557382 SPAG9O60271 1321 aaKnown RBP12.33□□□□□ -0.44
PPP4R3A-212ENST00000557382 DCAF8L1A6NGE4 600 aa12.32□□□□□ -0.44
PPP4R3A-212ENST00000557382 PPP4R3CPQ6ZMV5 832 aa12.32□□□□□ -0.44
PPP4R3A-212ENST00000557382 CARD11Q9BXL7 1154 aa12.32□□□□□ -0.44
PPP4R3A-212ENST00000557382 KTN1Q86UP2 1357 aaKnown RBP12.31□□□□□ -0.44
PPP4R3A-212ENST00000557382 NEURL4Q96JN8 1562 aa12.31□□□□□ -0.44
PPP4R3A-212ENST00000557382 DCAF11Q8TEB1 546 aa12.31□□□□□ -0.44
PPP4R3A-212ENST00000557382 FANCAO15360 1455 aa12.31□□□□□ -0.44
PPP4R3A-212ENST00000557382 TET3O43151 1660 aa12.31□□□□□ -0.44
PPP4R3A-212ENST00000557382 ATP7AQ04656 1500 aa12.31□□□□□ -0.44
PPP4R3A-212ENST00000557382 DHX29Q7Z478 1369 aaKnown RBP12.3□□□□□ -0.44
PPP4R3A-212ENST00000557382 VWDEQ8N2E2 1590 aa12.3□□□□□ -0.44
PPP4R3A-212ENST00000557382 CFAP74Q9C0B2 1584 aa12.3□□□□□ -0.44
PPP4R3A-212ENST00000557382 E9PCH4 1651 aa12.3□□□□□ -0.44
PPP4R3A-212ENST00000557382 A2MP01023 1474 aa12.3□□□□□ -0.44
PPP4R3A-212ENST00000557382 CEP152O94986 1710 aa12.29□□□□□ -0.44
PPP4R3A-212ENST00000557382 TRPM2O94759 1503 aa12.29□□□□□ -0.44
PPP4R3A-212ENST00000557382 ZNF326Q5BKZ1 582 aaKnown RBP12.29□□□□□ -0.44
PPP4R3A-212ENST00000557382 PTPRTO14522 1441 aa12.28□□□□□ -0.44
PPP4R3A-212ENST00000557382 ASXL2Q76L83 1435 aa12.28□□□□□ -0.44
PPP4R3A-212ENST00000557382 SPHKAPQ2M3C7 1700 aa12.28□□□□□ -0.44
PPP4R3A-212ENST00000557382 PRDM15P57071 1507 aaPredicted RBP12.28□□□□□ -0.44
PPP4R3A-212ENST00000557382 NEFLP07196 543 aa12.28□□□□□ -0.44
PPP4R3A-212ENST00000557382 OSCARQ8IYS5 282 aa12.27□□□□□ -0.45
PPP4R3A-212ENST00000557382 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.27□□□□□ -0.455e-6■□□□□ 9.9
PPP4R3A-212ENST00000557382 KANK1Q14678 1352 aa12.27□□□□□ -0.45
PPP4R3A-212ENST00000557382 ADGRL1O94910 1474 aa12.27□□□□□ -0.45
PPP4R3A-212ENST00000557382 RNF17Q9BXT8 1623 aaKnown RBP12.26□□□□□ -0.45
PPP4R3A-212ENST00000557382 HNRNPUQ00839 825 aaKnown RBP eCLIP12.26□□□□□ -0.45
PPP4R3A-212ENST00000557382 KDM2AQ9Y2K7 1162 aa12.26□□□□□ -0.45
PPP4R3A-212ENST00000557382 MRS2Q9HD23 443 aa12.25□□□□□ -0.45
PPP4R3A-212ENST00000557382 ST20-MTHFSA0A0A6YYL1 179 aa12.24□□□□□ -0.45
PPP4R3A-212ENST00000557382 AFAP1Q8N556 730 aa12.24□□□□□ -0.45
PPP4R3A-212ENST00000557382 SCAPERQ9BY12 1400 aa12.24□□□□□ -0.45
PPP4R3A-212ENST00000557382 KIAA1210Q9ULL0 1709 aa12.24□□□□□ -0.45
PPP4R3A-212ENST00000557382 ZBED9Q6R2W3 1325 aa12.23□□□□□ -0.45
PPP4R3A-212ENST00000557382 NPM1P06748 294 aaKnown RBP eCLIP12.23□□□□□ -0.45
PPP4R3A-212ENST00000557382 ERICH6BQ5W0A0 696 aa12.23□□□□□ -0.45
PPP4R3A-212ENST00000557382 KIDINS220Q9ULH0 1771 aa12.23□□□□□ -0.45
PPP4R3A-212ENST00000557382 LMTK2Q8IWU2 1503 aa12.22□□□□□ -0.45
PPP4R3A-212ENST00000557382 ZNF518AQ6AHZ1 1483 aa12.22□□□□□ -0.45
PPP4R3A-212ENST00000557382 WASHC2CQ9Y4E1 1318 aa12.22□□□□□ -0.45
PPP4R3A-212ENST00000557382 RALBP1Q15311 655 aa12.22□□□□□ -0.45
PPP4R3A-212ENST00000557382 MROH1Q8NDA8 1641 aa12.22□□□□□ -0.45
PPP4R3A-212ENST00000557382 MADDQ8WXG6 1647 aa12.22□□□□□ -0.45
PPP4R3A-212ENST00000557382 COL17A1Q9UMD9 1497 aaPredicted RBP12.21□□□□□ -0.45
PPP4R3A-212ENST00000557382 FKBP8Q14318 412 aa12.21□□□□□ -0.45
PPP4R3A-212ENST00000557382 IQGAP1P46940 1657 aa12.2□□□□□ -0.46
PPP4R3A-212ENST00000557382 CLTCL1P53675 1640 aa12.2□□□□□ -0.46
PPP4R3A-212ENST00000557382 CCDC184Q52MB2 194 aa12.2□□□□□ -0.46
PPP4R3A-212ENST00000557382 KIF1BO60333 1816 aa12.19□□□□□ -0.46
PPP4R3A-212ENST00000557382 RGL3Q3MIN7 710 aa12.19□□□□□ -0.46
PPP4R3A-212ENST00000557382 MLH3Q9UHC1 1453 aa12.19□□□□□ -0.46
PPP4R3A-212ENST00000557382 BRD4O60885 1362 aaPredicted RBP12.18□□□□□ -0.46
PPP4R3A-212ENST00000557382 EFCAB6Q5THR3 1501 aa12.17□□□□□ -0.46
PPP4R3A-212ENST00000557382 NEO1Q92859 1461 aa12.17□□□□□ -0.46
PPP4R3A-212ENST00000557382 NBPF1Q3BBV0 1214 aa12.17□□□□□ -0.46
PPP4R3A-212ENST00000557382 CD109Q6YHK3 1445 aa12.17□□□□□ -0.46
PPP4R3A-212ENST00000557382 POGZQ7Z3K3 1410 aa12.17□□□□□ -0.46
PPP4R3A-212ENST00000557382 MYBBP1AQ9BQG0 1328 aaKnown RBP12.16□□□□□ -0.46
PPP4R3A-212ENST00000557382 MYOM2P54296 1465 aa12.16□□□□□ -0.46
PPP4R3A-212ENST00000557382 SLC24A1O60721 1099 aa12.16□□□□□ -0.46
PPP4R3A-212ENST00000557382 FAM9BQ8IZU0 186 aa12.16□□□□□ -0.46
PPP4R3A-212ENST00000557382 TESK2Q96S53 571 aa12.16□□□□□ -0.46
PPP4R3A-212ENST00000557382 HECW2Q9P2P5 1572 aa12.16□□□□□ -0.46
PPP4R3A-212ENST00000557382 INSRP06213 1382 aa12.16□□□□□ -0.46
PPP4R3A-212ENST00000557382 IFT172Q9UG01 1749 aa12.15□□□□□ -0.46
PPP4R3A-212ENST00000557382 KIF3BO15066 747 aa12.15□□□□□ -0.46
PPP4R3A-212ENST00000557382 TMF1P82094 1093 aa12.15□□□□□ -0.46
PPP4R3A-212ENST00000557382 CNKSR2Q8WXI2 1034 aa12.15□□□□□ -0.46
PPP4R3A-212ENST00000557382 POLR3GLQ9BT43 218 aa12.15□□□□□ -0.46
PPP4R3A-212ENST00000557382 RNF216Q9NWF9 866 aaPredicted RBP12.15□□□□□ -0.46
PPP4R3A-212ENST00000557382 ZMYM4Q5VZL5 1548 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms