RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 ZNF142P52746 1687 aaPredicted RBP25.01■■□□□ 1.59
TUBB3-213ENST00000557262 APLP2Q06481 763 aa25■■□□□ 1.59
TUBB3-213ENST00000557262 FBXO31Q5XUX0 539 aaPredicted RBP25■■□□□ 1.59
TUBB3-213ENST00000557262 CEP170BQ9Y4F5 1589 aaPredicted RBP25■■□□□ 1.59
TUBB3-213ENST00000557262 MYOM3Q5VTT5 1437 aa24.99■■□□□ 1.59
TUBB3-213ENST00000557262 PLA2R1Q13018 1463 aa24.97■■□□□ 1.59
TUBB3-213ENST00000557262 LTBP4Q8N2S1 1624 aa24.97■■□□□ 1.59
TUBB3-213ENST00000557262 FAM135AQ9P2D6 1515 aa24.96■■□□□ 1.59
TUBB3-213ENST00000557262 KDM5DQ9BY66 1539 aa24.96■■□□□ 1.59
TUBB3-213ENST00000557262 A2ML1A8K2U0 1454 aa24.95■■□□□ 1.58
TUBB3-213ENST00000557262 TNRQ92752 1358 aa24.94■■□□□ 1.58
TUBB3-213ENST00000557262 PZPP20742 1482 aa24.94■■□□□ 1.58
TUBB3-213ENST00000557262 MAST1Q9Y2H9 1570 aa24.93■■□□□ 1.58
TUBB3-213ENST00000557262 TCOF1Q13428 1488 aaKnown RBP24.92■■□□□ 1.58
TUBB3-213ENST00000557262 ZNF335Q9H4Z2 1342 aaPredicted RBP24.89■■□□□ 1.58
TUBB3-213ENST00000557262 DNMT1P26358 1616 aaKnown RBP24.89■■□□□ 1.57
TUBB3-213ENST00000557262 IQSEC2Q5JU85 1478 aa24.87■■□□□ 1.57
TUBB3-213ENST00000557262 THEMISQ8N1K5 641 aaPredicted RBP24.86■■□□□ 1.57
TUBB3-213ENST00000557262 RNF17Q9BXT8 1623 aaKnown RBP24.83■■□□□ 1.57
TUBB3-213ENST00000557262 ANKLE2Q86XL3 938 aa24.83■■□□□ 1.57
TUBB3-213ENST00000557262 NLRP1Q9C000 1473 aa24.82■■□□□ 1.56
TUBB3-213ENST00000557262 DUOX2Q9NRD8 1548 aa24.81■■□□□ 1.56
TUBB3-213ENST00000557262 ABCC5O15440 1437 aa24.81■■□□□ 1.56
TUBB3-213ENST00000557262 RRP7BPQ9NSQ0 103 aa24.81■■□□□ 1.56
TUBB3-213ENST00000557262 EIF2AK4Q9P2K8 1649 aaKnown RBP24.81■■□□□ 1.56
TUBB3-213ENST00000557262 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.8■■□□□ 1.56
TUBB3-213ENST00000557262 ABCC3O15438 1527 aa24.8■■□□□ 1.56
TUBB3-213ENST00000557262 PTPN23Q9H3S7 1636 aa24.78■■□□□ 1.56
TUBB3-213ENST00000557262 KIF15Q9NS87 1388 aa24.78■■□□□ 1.56
TUBB3-213ENST00000557262 FGD6Q6ZV73 1430 aa24.77■■□□□ 1.56
TUBB3-213ENST00000557262 SHANK2Q9UPX8 1470 aa24.77■■□□□ 1.56
TUBB3-213ENST00000557262 UGGT1Q9NYU2 1555 aa24.76■■□□□ 1.55
TUBB3-213ENST00000557262 ZC3H13Q5T200 1668 aaKnown RBP24.76■■□□□ 1.55
TUBB3-213ENST00000557262 DAPK1P53355 1430 aa24.75■■□□□ 1.55
TUBB3-213ENST00000557262 POLR1AO95602 1720 aaPredicted RBP24.75■■□□□ 1.55
TUBB3-213ENST00000557262 UBAP1LF5GYI3 381 aa24.74■■□□□ 1.55
TUBB3-213ENST00000557262 NEURL4Q96JN8 1562 aa24.74■■□□□ 1.55
TUBB3-213ENST00000557262 MROH1Q8NDA8 1641 aa24.74■■□□□ 1.55
TUBB3-213ENST00000557262 SPATA31D1Q6ZQQ2 1576 aa24.73■■□□□ 1.55
TUBB3-213ENST00000557262 ERBINQ96RT1 1412 aa24.73■■□□□ 1.55
TUBB3-213ENST00000557262 ERVK-7P63135 1459 aa24.72■■□□□ 1.55
TUBB3-213ENST00000557262 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.72■■□□□ 1.55
TUBB3-213ENST00000557262 CHIC2Q9UKJ5 165 aa24.72■■□□□ 1.55
TUBB3-213ENST00000557262 CROCC2H7BZ55 1655 aa24.7■■□□□ 1.54
TUBB3-213ENST00000557262 ANKRD30AQ9BXX3 1397 aa24.69■■□□□ 1.54
TUBB3-213ENST00000557262 CEP152O94986 1710 aa24.68■■□□□ 1.54
TUBB3-213ENST00000557262 MED14O60244 1454 aa24.68■■□□□ 1.54
TUBB3-213ENST00000557262 NPHP4O75161 1426 aaPredicted RBP24.68■■□□□ 1.54
TUBB3-213ENST00000557262 ARHGAP31Q2M1Z3 1444 aa24.68■■□□□ 1.54
TUBB3-213ENST00000557262 KANK1Q14678 1352 aa24.67■■□□□ 1.54
TUBB3-213ENST00000557262 DISP3Q9P2K9 1392 aa24.67■■□□□ 1.54
TUBB3-213ENST00000557262 DEPDC5O75140 1603 aa24.65■■□□□ 1.54
TUBB3-213ENST00000557262 CFAP65Q6ZU64 1925 aaKnown RBP24.65■■□□□ 1.54
TUBB3-213ENST00000557262 PRDM15P57071 1507 aaPredicted RBP24.65■■□□□ 1.54
TUBB3-213ENST00000557262 CPS1P31327 1500 aa24.64■■□□□ 1.53
TUBB3-213ENST00000557262 FAM50AQ14320 339 aaKnown RBP24.63■■□□□ 1.53
TUBB3-213ENST00000557262 TOM1O60784 492 aa24.6■■□□□ 1.53
TUBB3-213ENST00000557262 VWDEQ8N2E2 1590 aa24.59■■□□□ 1.53
TUBB3-213ENST00000557262 TXNDC2Q86VQ3 553 aa24.58■■□□□ 1.53
TUBB3-213ENST00000557262 IQGAP1P46940 1657 aa24.58■■□□□ 1.53
TUBB3-213ENST00000557262 UBR1Q8IWV7 1749 aa24.56■■□□□ 1.52
TUBB3-213ENST00000557262 LTKP29376 864 aa24.56■■□□□ 1.52
TUBB3-213ENST00000557262 STAG3Q9UJ98 1225 aa24.55■■□□□ 1.52
TUBB3-213ENST00000557262 EID1Q9Y6B2 187 aa24.55■■□□□ 1.52
TUBB3-213ENST00000557262 ADGRL2O95490 1459 aa24.55■■□□□ 1.52
TUBB3-213ENST00000557262 PIP4K2BP78356 416 aa24.54■■□□□ 1.52
TUBB3-213ENST00000557262 LMTK2Q8IWU2 1503 aa24.54■■□□□ 1.52
TUBB3-213ENST00000557262 SCAF11Q99590 1463 aaKnown RBP24.53■■□□□ 1.52
TUBB3-213ENST00000557262 IDI1Q13907 227 aa24.53■■□□□ 1.52
TUBB3-213ENST00000557262 ILDR2Q71H61 639 aa24.53■■□□□ 1.52
TUBB3-213ENST00000557262 SCAF1Q9H7N4 1312 aaKnown RBP24.53■■□□□ 1.52
TUBB3-213ENST00000557262 ARHGAP23Q9P227 1491 aa24.52■■□□□ 1.52
TUBB3-213ENST00000557262 SLIT1O75093 1534 aa24.51■■□□□ 1.51
TUBB3-213ENST00000557262 ANKRD50Q9ULJ7 1429 aa24.49■■□□□ 1.51
TUBB3-213ENST00000557262 TMEM2Q9UHN6 1383 aa24.48■■□□□ 1.51
TUBB3-213ENST00000557262 HSPA1LP34931 641 aa24.47■■□□□ 1.51
TUBB3-213ENST00000557262 PIK3C2BO00750 1634 aa24.46■■□□□ 1.51
TUBB3-213ENST00000557262 SLC52A1Q9NWF4 448 aa24.46■■□□□ 1.51
TUBB3-213ENST00000557262 STRCP1A6NGW2 1772 aa24.46■■□□□ 1.51
TUBB3-213ENST00000557262 NOS1P29475 1434 aa24.45■■□□□ 1.51
TUBB3-213ENST00000557262 LRRC7Q96NW7 1537 aa24.45■■□□□ 1.5
TUBB3-213ENST00000557262 EFCAB6Q5THR3 1501 aa24.42■■□□□ 1.5
TUBB3-213ENST00000557262 SYNMO15061 1565 aa24.4■■□□□ 1.5
TUBB3-213ENST00000557262 KDM5AP29375 1690 aaKnown RBP24.4■■□□□ 1.5
TUBB3-213ENST00000557262 ALKQ9UM73 1620 aa24.39■■□□□ 1.5
TUBB3-213ENST00000557262 RPRD2Q5VT52 1461 aaKnown RBP24.38■■□□□ 1.49
TUBB3-213ENST00000557262 ROCK1Q13464 1354 aa24.38■■□□□ 1.49
TUBB3-213ENST00000557262 SOCS7O14512 581 aa24.37■■□□□ 1.49
TUBB3-213ENST00000557262 PPARGC1BQ86YN6 1023 aaKnown RBP24.36■■□□□ 1.49
TUBB3-213ENST00000557262 KCNA6P17658 529 aa24.34■■□□□ 1.49
TUBB3-213ENST00000557262 ITGAEP38570 1179 aa24.34■■□□□ 1.49
TUBB3-213ENST00000557262 SLC26A8Q96RN1 970 aa24.34■■□□□ 1.49
TUBB3-213ENST00000557262 HDGFP51858 240 aaKnown RBP24.33■■□□□ 1.49
TUBB3-213ENST00000557262 ADGRB3O60242 1522 aa24.32■■□□□ 1.48
TUBB3-213ENST00000557262 BCANQ96GW7 911 aa24.32■■□□□ 1.48
TUBB3-213ENST00000557262 TET3O43151 1660 aa24.31■■□□□ 1.48
TUBB3-213ENST00000557262 UNC13BO14795 1591 aa24.29■■□□□ 1.48
TUBB3-213ENST00000557262 PROSER2Q86WR7 435 aaPredicted RBP24.28■■□□□ 1.48
TUBB3-213ENST00000557262 NUP155O75694 1391 aa24.27■■□□□ 1.48
TUBB3-213ENST00000557262 CHGAP10645 457 aaKnown RBP24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms