RNA–Protein interactions for RNA: ENST00000557171.1

LINC02346-202, Transcript of long intergenic non-protein coding RNA 2346, humanhuman

TSL 3

Gene LINC02346, Length 518 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02346-202ENST00000557171 CFAP44Q96MT7 982 aa13.3□□□□□ -0.28
LINC02346-202ENST00000557171 STAG3Q9UJ98 1225 aa13.3□□□□□ -0.28
LINC02346-202ENST00000557171 TAOK2Q9UL54 1235 aa13.3□□□□□ -0.28
LINC02346-202ENST00000557171 REREQ9P2R6 1566 aa13.29□□□□□ -0.28
LINC02346-202ENST00000557171 PIP4K2BP78356 416 aa13.29□□□□□ -0.28
LINC02346-202ENST00000557171 PLCD3Q8N3E9 789 aa13.29□□□□□ -0.28
LINC02346-202ENST00000557171 DIP2CQ9Y2E4 1556 aa13.28□□□□□ -0.28
LINC02346-202ENST00000557171 CAMSAP1Q5T5Y3 1602 aa13.28□□□□□ -0.28
LINC02346-202ENST00000557171 TOM1O60784 492 aa13.28□□□□□ -0.28
LINC02346-202ENST00000557171 SSUH2Q9Y2M2 353 aa13.28□□□□□ -0.28
LINC02346-202ENST00000557171 DSG3P32926 999 aa13.27□□□□□ -0.29
LINC02346-202ENST00000557171 TROQ12816 1431 aaPredicted RBP13.27□□□□□ -0.29
LINC02346-202ENST00000557171 C3P01024 1663 aa13.27□□□□□ -0.29
LINC02346-202ENST00000557171 ARHGAP5Q13017 1502 aa13.25□□□□□ -0.29
LINC02346-202ENST00000557171 MIER1Q8N108 512 aa13.25□□□□□ -0.29
LINC02346-202ENST00000557171 PLA2R1Q13018 1463 aa13.24□□□□□ -0.29
LINC02346-202ENST00000557171 TCOF1Q13428 1488 aaKnown RBP13.24□□□□□ -0.29
LINC02346-202ENST00000557171 SPDYE2BA6NHP3 402 aa13.23□□□□□ -0.29
LINC02346-202ENST00000557171 SPDYE6P0CI01 402 aa13.23□□□□□ -0.29
LINC02346-202ENST00000557171 SPDYE2Q495Y8 402 aa13.23□□□□□ -0.29
LINC02346-202ENST00000557171 PTPRKQ15262 1439 aa13.22□□□□□ -0.29
LINC02346-202ENST00000557171 MED1Q15648 1581 aaPredicted RBP13.22□□□□□ -0.29
LINC02346-202ENST00000557171 EEA1Q15075 1411 aa13.22□□□□□ -0.29
LINC02346-202ENST00000557171 FMN1Q68DA7 1419 aa13.22□□□□□ -0.29
LINC02346-202ENST00000557171 ABCA6Q8N139 1617 aa13.21□□□□□ -0.29
LINC02346-202ENST00000557171 RGS17Q9UGC6 210 aaPredicted RBP13.2□□□□□ -0.3
LINC02346-202ENST00000557171 KIF14Q15058 1648 aa13.2□□□□□ -0.3
LINC02346-202ENST00000557171 HNRNPMP52272 730 aaKnown RBP eCLIP13.19□□□□□ -0.3
LINC02346-202ENST00000557171 GGT6Q6P531 493 aa13.19□□□□□ -0.3
LINC02346-202ENST00000557171 TSHZ2Q9NRE2 1034 aa13.19□□□□□ -0.3
LINC02346-202ENST00000557171 CLIP1P30622 1438 aa13.19□□□□□ -0.3
LINC02346-202ENST00000557171 SPAG9O60271 1321 aaKnown RBP13.18□□□□□ -0.3
LINC02346-202ENST00000557171 MYO5CQ9NQX4 1742 aa13.16□□□□□ -0.3
LINC02346-202ENST00000557171 UBTFP17480 764 aaKnown RBP13.16□□□□□ -0.3
LINC02346-202ENST00000557171 ZNF777Q9ULD5 760 aaPredicted RBP13.16□□□□□ -0.3
LINC02346-202ENST00000557171 ARHGAP35Q9NRY4 1499 aa13.16□□□□□ -0.3
LINC02346-202ENST00000557171 ABCC1P33527 1531 aa13.15□□□□□ -0.3
LINC02346-202ENST00000557171 SHANK2Q9UPX8 1470 aa13.15□□□□□ -0.3
LINC02346-202ENST00000557171 TPRNQ4KMQ1 711 aa13.14□□□□□ -0.31
LINC02346-202ENST00000557171 FBXO31Q5XUX0 539 aaPredicted RBP13.14□□□□□ -0.31
LINC02346-202ENST00000557171 SPRYD3Q8NCJ5 442 aa13.14□□□□□ -0.31
LINC02346-202ENST00000557171 KIDINS220Q9ULH0 1771 aa13.13□□□□□ -0.31
LINC02346-202ENST00000557171 ANKLE2Q86XL3 938 aa13.13□□□□□ -0.31
LINC02346-202ENST00000557171 CIZ1Q9ULV3 898 aaPredicted RBP13.13□□□□□ -0.31
LINC02346-202ENST00000557171 CEP170BQ9Y4F5 1589 aaPredicted RBP13.12□□□□□ -0.31
LINC02346-202ENST00000557171 CPS1P31327 1500 aa13.12□□□□□ -0.31
LINC02346-202ENST00000557171 A2ML1A8K2U0 1454 aa13.11□□□□□ -0.31
LINC02346-202ENST00000557171 SAMD9LQ8IVG5 1584 aa13.11□□□□□ -0.31
LINC02346-202ENST00000557171 A2MP01023 1474 aa13.1□□□□□ -0.31
LINC02346-202ENST00000557171 CHGAP10645 457 aaKnown RBP13.1□□□□□ -0.31
LINC02346-202ENST00000557171 ALKQ9UM73 1620 aa13.1□□□□□ -0.31
LINC02346-202ENST00000557171 MROH2AA6NES4 1674 aa13.09□□□□□ -0.31
LINC02346-202ENST00000557171 CDC42BPBQ9Y5S2 1711 aa13.09□□□□□ -0.31
LINC02346-202ENST00000557171 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.08□□□□□ -0.31
LINC02346-202ENST00000557171 KIAA1107Q9UPP5 1409 aa13.08□□□□□ -0.32
LINC02346-202ENST00000557171 THEMISQ8N1K5 641 aaPredicted RBP13.08□□□□□ -0.32
LINC02346-202ENST00000557171 GPATCH8Q9UKJ3 1502 aaKnown RBP13.08□□□□□ -0.32
LINC02346-202ENST00000557171 POTEAQ6S8J7 498 aa13.07□□□□□ -0.32
LINC02346-202ENST00000557171 CFDP1Q9UEE9 299 aaPredicted RBP13.07□□□□□ -0.32
LINC02346-202ENST00000557171 TNRQ92752 1358 aa13.07□□□□□ -0.32
LINC02346-202ENST00000557171 MYO3AQ8NEV4 1616 aa13.06□□□□□ -0.32
LINC02346-202ENST00000557171 DNMT1P26358 1616 aaKnown RBP13.06□□□□□ -0.32
LINC02346-202ENST00000557171 ZNF142P52746 1687 aaPredicted RBP13.05□□□□□ -0.32
LINC02346-202ENST00000557171 PLXNC1O60486 1568 aa13.04□□□□□ -0.32
LINC02346-202ENST00000557171 VWDEQ8N2E2 1590 aa13.04□□□□□ -0.32
LINC02346-202ENST00000557171 NEURL4Q96JN8 1562 aa13.04□□□□□ -0.32
LINC02346-202ENST00000557171 PREX2Q70Z35 1606 aa13.04□□□□□ -0.32
LINC02346-202ENST00000557171 ITSN2Q9NZM3 1697 aa13.04□□□□□ -0.32
LINC02346-202ENST00000557171 CASKIN1Q8WXD9 1431 aa13.04□□□□□ -0.32
LINC02346-202ENST00000557171 ZNF644Q9H582 1327 aaPredicted RBP13.03□□□□□ -0.32
LINC02346-202ENST00000557171 DHX29Q7Z478 1369 aaKnown RBP13.03□□□□□ -0.32
LINC02346-202ENST00000557171 NPHP4O75161 1426 aaPredicted RBP13.03□□□□□ -0.32
LINC02346-202ENST00000557171 MIA2Q96PC5 1412 aa13.03□□□□□ -0.32
LINC02346-202ENST00000557171 MED14O60244 1454 aa13.03□□□□□ -0.32
LINC02346-202ENST00000557171 SYCP2Q9BX26 1530 aa13.03□□□□□ -0.32
LINC02346-202ENST00000557171 CLTCQ00610 1675 aaKnown RBP13.02□□□□□ -0.32
LINC02346-202ENST00000557171 KIF3BO15066 747 aa13.02□□□□□ -0.33
LINC02346-202ENST00000557171 ATP7AQ04656 1500 aa13.02□□□□□ -0.33
LINC02346-202ENST00000557171 LRRC7Q96NW7 1537 aa13.01□□□□□ -0.33
LINC02346-202ENST00000557171 SUPT6HQ7KZ85 1726 aaKnown RBP13□□□□□ -0.33
LINC02346-202ENST00000557171 WASHC2CQ9Y4E1 1318 aa13□□□□□ -0.33
LINC02346-202ENST00000557171 CCDC18Q5T9S5 1454 aa12.99□□□□□ -0.33
LINC02346-202ENST00000557171 PLEKHH2Q8IVE3 1493 aa12.99□□□□□ -0.33
LINC02346-202ENST00000557171 PZPP20742 1482 aa12.97□□□□□ -0.33
LINC02346-202ENST00000557171 MBD5Q9P267 1494 aa12.97□□□□□ -0.33
LINC02346-202ENST00000557171 CCNB3Q8WWL7 1395 aa12.97□□□□□ -0.33
LINC02346-202ENST00000557171 RTEL1-TNFRSF6BF6WH68 1400 aa12.96□□□□□ -0.33
LINC02346-202ENST00000557171 POTEDQ86YR6 584 aa12.96□□□□□ -0.33
LINC02346-202ENST00000557171 RNF25Q96BH1 459 aaPredicted RBP12.96□□□□□ -0.33
LINC02346-202ENST00000557171 LRRIQ1Q96JM4 1722 aa12.96□□□□□ -0.34
LINC02346-202ENST00000557171 INO80Q9ULG1 1556 aaPredicted RBP12.95□□□□□ -0.34
LINC02346-202ENST00000557171 ZBTB47Q9UFB7 747 aaPredicted RBP12.95□□□□□ -0.34
LINC02346-202ENST00000557171 NLRP1Q9C000 1473 aa12.95□□□□□ -0.34
LINC02346-202ENST00000557171 FAM135BQ49AJ0 1406 aa12.95□□□□□ -0.34
LINC02346-202ENST00000557171 FAM135AQ9P2D6 1515 aa12.94□□□□□ -0.34
LINC02346-202ENST00000557171 CDC42BPAQ5VT25 1732 aa12.94□□□□□ -0.34
LINC02346-202ENST00000557171 PLEKHG5O94827 1062 aa12.94□□□□□ -0.34
LINC02346-202ENST00000557171 LTKP29376 864 aa12.93□□□□□ -0.34
LINC02346-202ENST00000557171 HS6ST3Q8IZP7 471 aa12.93□□□□□ -0.34
LINC02346-202ENST00000557171 UGGT1Q9NYU2 1555 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms